data_4HYX
#
_model_server_result.job_id            eApnm2BK4RG1NeEoodj39g 
_model_server_result.datetime_utc      '2024-12-21 12:31:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hyx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    4HYX 
#
_exptl.entry_id    4HYX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              142.282 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DECANE 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.83 
_cell.angle_gamma         90 
_cell.entry_id            4HYX 
_cell.length_a            45.89 
_cell.length_b            112.92 
_cell.length_c            56.29 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HYX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,T 1 1 
B,K,L,M,N,O,P,Q,R,S,U 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 L N N 
? 4 M N N 
? 4 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 229 A LYS 216 1_555 C C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? 
covale ? covale2 B NZ LYS 229 B LYS 216 1_555 K C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? 
#
_chem_comp.formula           'C10 H22' 
_chem_comp.formula_weight    142.282 
_chem_comp.id                D10 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DECANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 D10 sing 113 n n 
C1 H11 D10 sing 114 n n 
C1 H12 D10 sing 115 n n 
C1 H13 D10 sing 116 n n 
C2 C3 D10 sing 117 n n 
C2 H21 D10 sing 118 n n 
C2 H22 D10 sing 119 n n 
C3 C4 D10 sing 120 n n 
C3 H31 D10 sing 121 n n 
C3 H32 D10 sing 122 n n 
C4 C5 D10 sing 123 n n 
C4 H41 D10 sing 124 n n 
C4 H42 D10 sing 125 n n 
C5 C6 D10 sing 126 n n 
C5 H51 D10 sing 127 n n 
C5 H52 D10 sing 128 n n 
C6 C7 D10 sing 129 n n 
C6 H61 D10 sing 130 n n 
C6 H62 D10 sing 131 n n 
C7 C8 D10 sing 132 n n 
C7 H71 D10 sing 133 n n 
C7 H72 D10 sing 134 n n 
C8 C9 D10 sing 135 n n 
C8 H81 D10 sing 136 n n 
C8 H82 D10 sing 137 n n 
C9 C10 D10 sing 138 n n 
C9 H91 D10 sing 139 n n 
C9 H92 D10 sing 140 n n 
C10 H101 D10 sing 141 n n 
C10 H102 D10 sing 142 n n 
C10 H103 D10 sing 143 n n 
#
_atom_sites.entry_id                     4HYX 
_atom_sites.fract_transf_matrix[1][1]    0.021791 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.009625 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008856 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019421 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 RET A 1 301 301 RET RET . 
D 3 OCT A 1 302 302 OCT OCT . 
E 4 D10 A 1 303 303 D10 D10 . 
F 4 D10 A 1 304 304 D10 D10 . 
G 4 D10 A 1 305 305 D10 D10 . 
H 4 D10 A 1 306 306 D10 D10 . 
I 4 D10 A 1 307 307 D10 D10 . 
J 3 OCT A 1 308 308 OCT OCT . 
K 2 RET B 1 301 301 RET RET . 
L 4 D10 B 1 302 302 D10 D10 . 
M 4 D10 B 1 303 303 D10 D10 . 
N 5 HEX B 1 304 304 HEX HEX . 
O 6 C14 B 1 305 305 C14 C14 . 
P 3 OCT B 1 306 306 OCT OCT . 
Q 3 OCT B 1 307 307 OCT OCT . 
R 4 D10 B 1 308 308 D10 D10 . 
S 7 GOL B 1 309 1 GOL GOL . 
T 8 HOH A 1 401 401 HOH HOH . 
T 8 HOH A 2 402 402 HOH HOH . 
T 8 HOH A 3 403 403 HOH HOH . 
T 8 HOH A 4 404 404 HOH HOH . 
T 8 HOH A 5 405 405 HOH HOH . 
T 8 HOH A 6 406 406 HOH HOH . 
T 8 HOH A 7 407 407 HOH HOH . 
T 8 HOH A 8 408 408 HOH HOH . 
T 8 HOH A 9 409 409 HOH HOH . 
T 8 HOH A 10 410 410 HOH HOH . 
T 8 HOH A 11 411 411 HOH HOH . 
T 8 HOH A 12 412 412 HOH HOH . 
T 8 HOH A 13 413 413 HOH HOH . 
T 8 HOH A 14 414 414 HOH HOH . 
T 8 HOH A 15 415 415 HOH HOH . 
T 8 HOH A 16 416 416 HOH HOH . 
T 8 HOH A 17 417 417 HOH HOH . 
T 8 HOH A 18 418 418 HOH HOH . 
T 8 HOH A 19 419 419 HOH HOH . 
T 8 HOH A 20 420 412 HOH HOH . 
T 8 HOH A 21 421 415 HOH HOH . 
T 8 HOH A 22 422 416 HOH HOH . 
U 8 HOH B 1 401 401 HOH HOH . 
U 8 HOH B 2 402 402 HOH HOH . 
U 8 HOH B 3 403 403 HOH HOH . 
U 8 HOH B 4 404 404 HOH HOH . 
U 8 HOH B 5 405 405 HOH HOH . 
U 8 HOH B 6 406 406 HOH HOH . 
U 8 HOH B 7 407 407 HOH HOH . 
U 8 HOH B 8 408 408 HOH HOH . 
U 8 HOH B 9 409 409 HOH HOH . 
U 8 HOH B 10 410 410 HOH HOH . 
U 8 HOH B 11 411 411 HOH HOH . 
U 8 HOH B 12 412 413 HOH HOH . 
U 8 HOH B 13 413 414 HOH HOH . 
U 8 HOH B 14 414 417 HOH HOH . 
U 8 HOH B 15 415 418 HOH HOH . 
U 8 HOH B 16 416 419 HOH HOH . 
U 8 HOH B 17 417 420 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 D10 . . . E 4 -21.829 -14.659 8.186 1 42.83 ? C1 D10 303 A 1 
HETATM 2 C C2 D10 . . . E 4 -23.305 -14.779 8.219 1 45.5 ? C2 D10 303 A 1 
HETATM 3 C C3 D10 . . . E 4 -23.906 -13.391 8.344 1 56.96 ? C3 D10 303 A 1 
HETATM 4 C C4 D10 . . . E 4 -25.161 -13.408 9.203 1 56.17 ? C4 D10 303 A 1 
HETATM 5 C C5 D10 . . . E 4 -26.088 -12.244 8.912 1 60.45 ? C5 D10 303 A 1 
HETATM 6 C C6 D10 . . . E 4 -26.973 -12.012 10.121 1 64.48 ? C6 D10 303 A 1 
HETATM 7 C C7 D10 . . . E 4 -28.304 -11.33 9.821 1 65.03 ? C7 D10 303 A 1 
HETATM 8 C C8 D10 . . . E 4 -29.43 -12.341 9.599 1 68.31 ? C8 D10 303 A 1 
HETATM 9 C C9 D10 . . . E 4 -30.591 -12.237 10.599 1 64.46 ? C9 D10 303 A 1 
HETATM 10 C C10 D10 . . . E 4 -31.31 -13.566 10.72 1 63.46 ? C10 D10 303 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           570 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           10 
#