data_4HYX
#
_model_server_result.job_id            1rPXXh9L8BQmU2AMYfAncQ 
_model_server_result.datetime_utc      '2024-12-21 12:13:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4hyx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":307}' 
#
_entry.id    4HYX 
#
_exptl.entry_id    4HYX 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              114.229 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-OCTANE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.83 
_cell.angle_gamma         90 
_cell.entry_id            4HYX 
_cell.length_a            45.89 
_cell.length_b            112.92 
_cell.length_c            56.29 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4HYX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,T 1 1 
B,K,L,M,N,O,P,Q,R,S,U 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 J N N 
? 3 P N N 
? 3 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 229 A LYS 216 1_555 C C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? 
covale ? covale2 B NZ LYS 229 B LYS 216 1_555 K C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? 
#
_chem_comp.formula           'C8 H18' 
_chem_comp.formula_weight    114.229 
_chem_comp.id                OCT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-OCTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OCT sing 309 n n 
C1 H11 OCT sing 310 n n 
C1 H12 OCT sing 311 n n 
C1 H13 OCT sing 312 n n 
C2 C3 OCT sing 313 n n 
C2 H21 OCT sing 314 n n 
C2 H22 OCT sing 315 n n 
C3 C4 OCT sing 316 n n 
C3 H31 OCT sing 317 n n 
C3 H32 OCT sing 318 n n 
C4 C5 OCT sing 319 n n 
C4 H41 OCT sing 320 n n 
C4 H42 OCT sing 321 n n 
C5 C6 OCT sing 322 n n 
C5 H51 OCT sing 323 n n 
C5 H52 OCT sing 324 n n 
C6 C7 OCT sing 325 n n 
C6 H61 OCT sing 326 n n 
C6 H62 OCT sing 327 n n 
C7 C8 OCT sing 328 n n 
C7 H71 OCT sing 329 n n 
C7 H72 OCT sing 330 n n 
C8 H81 OCT sing 331 n n 
C8 H82 OCT sing 332 n n 
C8 H83 OCT sing 333 n n 
#
_atom_sites.entry_id                     4HYX 
_atom_sites.fract_transf_matrix[1][1]    0.021791 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.009625 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008856 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019421 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 RET A 1 301 301 RET RET . 
D 3 OCT A 1 302 302 OCT OCT . 
E 4 D10 A 1 303 303 D10 D10 . 
F 4 D10 A 1 304 304 D10 D10 . 
G 4 D10 A 1 305 305 D10 D10 . 
H 4 D10 A 1 306 306 D10 D10 . 
I 4 D10 A 1 307 307 D10 D10 . 
J 3 OCT A 1 308 308 OCT OCT . 
K 2 RET B 1 301 301 RET RET . 
L 4 D10 B 1 302 302 D10 D10 . 
M 4 D10 B 1 303 303 D10 D10 . 
N 5 HEX B 1 304 304 HEX HEX . 
O 6 C14 B 1 305 305 C14 C14 . 
P 3 OCT B 1 306 306 OCT OCT . 
Q 3 OCT B 1 307 307 OCT OCT . 
R 4 D10 B 1 308 308 D10 D10 . 
S 7 GOL B 1 309 1 GOL GOL . 
T 8 HOH A 1 401 401 HOH HOH . 
T 8 HOH A 2 402 402 HOH HOH . 
T 8 HOH A 3 403 403 HOH HOH . 
T 8 HOH A 4 404 404 HOH HOH . 
T 8 HOH A 5 405 405 HOH HOH . 
T 8 HOH A 6 406 406 HOH HOH . 
T 8 HOH A 7 407 407 HOH HOH . 
T 8 HOH A 8 408 408 HOH HOH . 
T 8 HOH A 9 409 409 HOH HOH . 
T 8 HOH A 10 410 410 HOH HOH . 
T 8 HOH A 11 411 411 HOH HOH . 
T 8 HOH A 12 412 412 HOH HOH . 
T 8 HOH A 13 413 413 HOH HOH . 
T 8 HOH A 14 414 414 HOH HOH . 
T 8 HOH A 15 415 415 HOH HOH . 
T 8 HOH A 16 416 416 HOH HOH . 
T 8 HOH A 17 417 417 HOH HOH . 
T 8 HOH A 18 418 418 HOH HOH . 
T 8 HOH A 19 419 419 HOH HOH . 
T 8 HOH A 20 420 412 HOH HOH . 
T 8 HOH A 21 421 415 HOH HOH . 
T 8 HOH A 22 422 416 HOH HOH . 
U 8 HOH B 1 401 401 HOH HOH . 
U 8 HOH B 2 402 402 HOH HOH . 
U 8 HOH B 3 403 403 HOH HOH . 
U 8 HOH B 4 404 404 HOH HOH . 
U 8 HOH B 5 405 405 HOH HOH . 
U 8 HOH B 6 406 406 HOH HOH . 
U 8 HOH B 7 407 407 HOH HOH . 
U 8 HOH B 8 408 408 HOH HOH . 
U 8 HOH B 9 409 409 HOH HOH . 
U 8 HOH B 10 410 410 HOH HOH . 
U 8 HOH B 11 411 411 HOH HOH . 
U 8 HOH B 12 412 413 HOH HOH . 
U 8 HOH B 13 413 414 HOH HOH . 
U 8 HOH B 14 414 417 HOH HOH . 
U 8 HOH B 15 415 418 HOH HOH . 
U 8 HOH B 16 416 419 HOH HOH . 
U 8 HOH B 17 417 420 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OCT . . . Q 3 -8.438 0.514 -39.434 1 60.54 ? C1 OCT 307 B 1 
HETATM 2 C C2 OCT . . . Q 3 -7.88 1.584 -38.529 1 57.21 ? C2 OCT 307 B 1 
HETATM 3 C C3 OCT . . . Q 3 -8.93 2.249 -37.663 1 60.16 ? C3 OCT 307 B 1 
HETATM 4 C C4 OCT . . . Q 3 -8.994 3.746 -37.968 1 60.81 ? C4 OCT 307 B 1 
HETATM 5 C C5 OCT . . . Q 3 -9.388 4.595 -36.77 1 64.3 ? C5 OCT 307 B 1 
HETATM 6 C C6 OCT . . . Q 3 -9.586 6.056 -37.179 1 63.56 ? C6 OCT 307 B 1 
HETATM 7 C C7 OCT . . . Q 3 -10.8 6.718 -36.507 1 66.48 ? C7 OCT 307 B 1 
HETATM 8 C C8 OCT . . . Q 3 -10.698 8.224 -36.614 1 67.92 ? C8 OCT 307 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#