data_4HZP # _model_server_result.job_id mZR0C2WzrxJxkbjf3D527A _model_server_result.datetime_utc '2024-11-08 15:08:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4hzp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4HZP # _exptl.entry_id 4HZP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4HZP _cell.length_a 59.711 _cell.length_b 59.711 _cell.length_c 311.113 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4HZP _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 51.852167 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 4HZP _atom_sites.fract_transf_matrix[1][1] 0.016747 _atom_sites.fract_transf_matrix[1][2] 0.009669 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019338 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003214 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 401 1 COA COA . C 3 CL A 1 402 1 CL CL . D 4 SO4 A 1 403 1 SO4 SO4 . E 4 SO4 A 1 404 2 SO4 SO4 . F 5 HOH A 1 501 1 HOH HOH . F 5 HOH A 2 502 2 HOH HOH . F 5 HOH A 3 503 3 HOH HOH . F 5 HOH A 4 504 4 HOH HOH . F 5 HOH A 5 505 5 HOH HOH . F 5 HOH A 6 506 6 HOH HOH . F 5 HOH A 7 507 7 HOH HOH . F 5 HOH A 8 508 8 HOH HOH . F 5 HOH A 9 509 9 HOH HOH . F 5 HOH A 10 510 10 HOH HOH . F 5 HOH A 11 511 11 HOH HOH . F 5 HOH A 12 512 12 HOH HOH . F 5 HOH A 13 513 13 HOH HOH . F 5 HOH A 14 514 14 HOH HOH . F 5 HOH A 15 515 15 HOH HOH . F 5 HOH A 16 516 16 HOH HOH . F 5 HOH A 17 517 17 HOH HOH . F 5 HOH A 18 518 18 HOH HOH . F 5 HOH A 19 519 19 HOH HOH . F 5 HOH A 20 520 20 HOH HOH . F 5 HOH A 21 521 21 HOH HOH . F 5 HOH A 22 522 22 HOH HOH . F 5 HOH A 23 523 23 HOH HOH . F 5 HOH A 24 524 24 HOH HOH . F 5 HOH A 25 525 25 HOH HOH . F 5 HOH A 26 526 26 HOH HOH . F 5 HOH A 27 527 27 HOH HOH . F 5 HOH A 28 528 28 HOH HOH . F 5 HOH A 29 529 29 HOH HOH . F 5 HOH A 30 530 30 HOH HOH . F 5 HOH A 31 531 31 HOH HOH . F 5 HOH A 32 532 32 HOH HOH . F 5 HOH A 33 533 33 HOH HOH . F 5 HOH A 34 534 34 HOH HOH . F 5 HOH A 35 535 35 HOH HOH . F 5 HOH A 36 536 36 HOH HOH . F 5 HOH A 37 537 37 HOH HOH . F 5 HOH A 38 538 38 HOH HOH . F 5 HOH A 39 539 39 HOH HOH . F 5 HOH A 40 540 40 HOH HOH . F 5 HOH A 41 541 41 HOH HOH . F 5 HOH A 42 542 42 HOH HOH . F 5 HOH A 43 543 43 HOH HOH . F 5 HOH A 44 544 44 HOH HOH . F 5 HOH A 45 545 45 HOH HOH . F 5 HOH A 46 546 46 HOH HOH . F 5 HOH A 47 547 47 HOH HOH . F 5 HOH A 48 548 48 HOH HOH . F 5 HOH A 49 549 49 HOH HOH . F 5 HOH A 50 550 50 HOH HOH . F 5 HOH A 51 551 51 HOH HOH . F 5 HOH A 52 552 52 HOH HOH . F 5 HOH A 53 553 53 HOH HOH . F 5 HOH A 54 554 54 HOH HOH . F 5 HOH A 55 555 55 HOH HOH . F 5 HOH A 56 556 56 HOH HOH . F 5 HOH A 57 557 57 HOH HOH . F 5 HOH A 58 558 58 HOH HOH . F 5 HOH A 59 559 59 HOH HOH . F 5 HOH A 60 560 60 HOH HOH . F 5 HOH A 61 561 61 HOH HOH . F 5 HOH A 62 562 62 HOH HOH . F 5 HOH A 63 563 63 HOH HOH . F 5 HOH A 64 564 64 HOH HOH . F 5 HOH A 65 565 65 HOH HOH . F 5 HOH A 66 566 66 HOH HOH . F 5 HOH A 67 567 67 HOH HOH . F 5 HOH A 68 568 68 HOH HOH . F 5 HOH A 69 569 69 HOH HOH . F 5 HOH A 70 570 70 HOH HOH . F 5 HOH A 71 571 71 HOH HOH . F 5 HOH A 72 572 72 HOH HOH . F 5 HOH A 73 573 73 HOH HOH . F 5 HOH A 74 574 74 HOH HOH . F 5 HOH A 75 575 75 HOH HOH . F 5 HOH A 76 576 76 HOH HOH . F 5 HOH A 77 577 77 HOH HOH . F 5 HOH A 78 578 78 HOH HOH . F 5 HOH A 79 579 79 HOH HOH . F 5 HOH A 80 580 80 HOH HOH . F 5 HOH A 81 581 81 HOH HOH . F 5 HOH A 82 582 82 HOH HOH . F 5 HOH A 83 583 83 HOH HOH . F 5 HOH A 84 584 84 HOH HOH . F 5 HOH A 85 585 85 HOH HOH . F 5 HOH A 86 586 86 HOH HOH . F 5 HOH A 87 587 87 HOH HOH . F 5 HOH A 88 588 88 HOH HOH . F 5 HOH A 89 589 89 HOH HOH . F 5 HOH A 90 590 90 HOH HOH . F 5 HOH A 91 591 91 HOH HOH . F 5 HOH A 92 592 92 HOH HOH . F 5 HOH A 93 593 93 HOH HOH . F 5 HOH A 94 594 94 HOH HOH . F 5 HOH A 95 595 95 HOH HOH . F 5 HOH A 96 596 96 HOH HOH . F 5 HOH A 97 597 97 HOH HOH . F 5 HOH A 98 598 98 HOH HOH . F 5 HOH A 99 599 99 HOH HOH . F 5 HOH A 100 600 100 HOH HOH . F 5 HOH A 101 601 101 HOH HOH . F 5 HOH A 102 602 102 HOH HOH . F 5 HOH A 103 603 103 HOH HOH . F 5 HOH A 104 604 104 HOH HOH . F 5 HOH A 105 605 105 HOH HOH . F 5 HOH A 106 606 106 HOH HOH . F 5 HOH A 107 607 107 HOH HOH . F 5 HOH A 108 608 108 HOH HOH . F 5 HOH A 109 609 109 HOH HOH . F 5 HOH A 110 610 110 HOH HOH . F 5 HOH A 111 611 111 HOH HOH . F 5 HOH A 112 612 112 HOH HOH . F 5 HOH A 113 613 113 HOH HOH . F 5 HOH A 114 614 114 HOH HOH . F 5 HOH A 115 615 115 HOH HOH . F 5 HOH A 116 616 116 HOH HOH . F 5 HOH A 117 617 117 HOH HOH . F 5 HOH A 118 618 118 HOH HOH . F 5 HOH A 119 619 119 HOH HOH . F 5 HOH A 120 620 120 HOH HOH . F 5 HOH A 121 621 121 HOH HOH . F 5 HOH A 122 622 122 HOH HOH . F 5 HOH A 123 623 123 HOH HOH . F 5 HOH A 124 624 124 HOH HOH . F 5 HOH A 125 625 125 HOH HOH . F 5 HOH A 126 626 126 HOH HOH . F 5 HOH A 127 627 127 HOH HOH . F 5 HOH A 128 628 128 HOH HOH . F 5 HOH A 129 629 129 HOH HOH . F 5 HOH A 130 630 130 HOH HOH . F 5 HOH A 131 631 131 HOH HOH . F 5 HOH A 132 632 132 HOH HOH . F 5 HOH A 133 633 133 HOH HOH . F 5 HOH A 134 634 134 HOH HOH . F 5 HOH A 135 635 135 HOH HOH . F 5 HOH A 136 636 136 HOH HOH . F 5 HOH A 137 637 137 HOH HOH . F 5 HOH A 138 638 138 HOH HOH . F 5 HOH A 139 639 139 HOH HOH . F 5 HOH A 140 640 140 HOH HOH . F 5 HOH A 141 641 141 HOH HOH . F 5 HOH A 142 642 142 HOH HOH . F 5 HOH A 143 643 143 HOH HOH . F 5 HOH A 144 644 144 HOH HOH . F 5 HOH A 145 645 145 HOH HOH . F 5 HOH A 146 646 146 HOH HOH . F 5 HOH A 147 647 147 HOH HOH . F 5 HOH A 148 648 148 HOH HOH . F 5 HOH A 149 649 149 HOH HOH . F 5 HOH A 150 650 150 HOH HOH . F 5 HOH A 151 651 151 HOH HOH . F 5 HOH A 152 652 152 HOH HOH . F 5 HOH A 153 653 153 HOH HOH . F 5 HOH A 154 654 154 HOH HOH . F 5 HOH A 155 655 155 HOH HOH . F 5 HOH A 156 656 156 HOH HOH . F 5 HOH A 157 657 157 HOH HOH . F 5 HOH A 158 658 158 HOH HOH . F 5 HOH A 159 659 159 HOH HOH . F 5 HOH A 160 660 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O5B COA . . . B 2 35.984 12.515 -2.279 1 47.47 ? O5B COA 401 A 1 HETATM 2 P P1A COA . . . B 2 34.779 13.367 -2.908 1 45.65 ? P1A COA 401 A 1 HETATM 3 O O1A COA . . . B 2 33.423 12.701 -2.788 1 47.67 ? O1A COA 401 A 1 HETATM 4 O O2A COA . . . B 2 35.094 13.847 -4.311 1 48.03 ? O2A COA 401 A 1 HETATM 5 O O3A COA . . . B 2 34.576 14.756 -2.119 1 42.25 ? O3A COA 401 A 1 HETATM 6 P P2A COA . . . B 2 35.356 15.197 -0.803 1 38.27 ? P2A COA 401 A 1 HETATM 7 O O4A COA . . . B 2 34.831 16.612 -0.541 1 36.97 ? O4A COA 401 A 1 HETATM 8 O O5A COA . . . B 2 36.813 15.064 -1.017 1 38.66 ? O5A COA 401 A 1 HETATM 9 O O6A COA . . . B 2 34.857 14.158 0.338 1 31.48 ? O6A COA 401 A 1 HETATM 10 C CBP COA . . . B 2 33.903 14.033 2.559 1 18.45 ? CBP COA 401 A 1 HETATM 11 C CCP COA . . . B 2 33.704 14.429 1.086 1 25.01 ? CCP COA 401 A 1 HETATM 12 C CDP COA . . . B 2 34.452 12.611 2.689 1 17.97 ? CDP COA 401 A 1 HETATM 13 C CEP COA . . . B 2 32.511 14.036 3.237 1 18.12 ? CEP COA 401 A 1 HETATM 14 C CAP COA . . . B 2 34.778 15.091 3.225 1 19.68 ? CAP COA 401 A 1 HETATM 15 O OAP COA . . . B 2 34.229 16.369 2.962 1 22.18 ? OAP COA 401 A 1 HETATM 16 C C9P COA . . . B 2 34.934 14.975 4.726 1 20.74 ? C9P COA 401 A 1 HETATM 17 O O9P COA . . . B 2 35.816 13.976 5.199 1 22.9 ? O9P COA 401 A 1 HETATM 18 N N8P COA . . . B 2 34.245 15.813 5.551 1 19.87 ? N8P COA 401 A 1 HETATM 19 C C7P COA . . . B 2 34.436 15.885 6.986 1 16.08 ? C7P COA 401 A 1 HETATM 20 C C6P COA . . . B 2 33.253 15.293 7.768 1 15.21 ? C6P COA 401 A 1 HETATM 21 C C5P COA . . . B 2 33.564 15.257 9.215 1 15.75 ? C5P COA 401 A 1 HETATM 22 O O5P COA . . . B 2 34.708 14.904 9.633 1 19.44 ? O5P COA 401 A 1 HETATM 23 N N4P COA . . . B 2 32.646 15.599 10.084 1 15.52 ? N4P COA 401 A 1 HETATM 24 C C3P COA . . . B 2 32.968 15.694 11.535 1 15.93 ? C3P COA 401 A 1 HETATM 25 C C2P COA . . . B 2 33.054 14.335 12.198 1 17.9 ? C2P COA 401 A 1 HETATM 26 S S1P COA . . . B 2 31.489 13.408 12.016 1 21.78 ? S1P COA 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 26 #