data_4I08 # _model_server_result.job_id NKwUEBT0hLgaeeF5SGXGRg _model_server_result.datetime_utc '2024-12-04 10:18:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i08 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":302}' # _entry.id 4I08 # _exptl.entry_id 4I08 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4I08 _cell.length_a 63.941 _cell.length_b 63.941 _cell.length_c 190.374 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I08 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -31.9705 -55.37453 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 368 n n S O2 SO4 doub 369 n n S O3 SO4 sing 370 n n S O4 SO4 sing 371 n n # _atom_sites.entry_id 4I08 _atom_sites.fract_transf_matrix[1][1] 0.015639 _atom_sites.fract_transf_matrix[1][2] 0.009029 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005253 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 301 1 SO4 SO4 . D 2 SO4 A 1 302 4 SO4 SO4 . E 2 SO4 A 1 303 5 SO4 SO4 . F 2 SO4 A 1 304 8 SO4 SO4 . G 3 EDO A 1 305 1 EDO EDO . H 4 NDP A 1 306 1 NDP NDP . I 2 SO4 B 1 301 2 SO4 SO4 . J 2 SO4 B 1 302 3 SO4 SO4 . K 2 SO4 B 1 303 6 SO4 SO4 . L 2 SO4 B 1 304 7 SO4 SO4 . M 2 SO4 B 1 305 10 SO4 SO4 . N 2 SO4 B 1 306 11 SO4 SO4 . O 3 EDO B 1 307 1 EDO EDO . P 4 NDP B 1 308 1 NDP NDP . Q 5 HOH A 1 401 3 HOH HOH . Q 5 HOH A 2 402 4 HOH HOH . Q 5 HOH A 3 403 5 HOH HOH . Q 5 HOH A 4 404 7 HOH HOH . Q 5 HOH A 5 405 8 HOH HOH . Q 5 HOH A 6 406 9 HOH HOH . Q 5 HOH A 7 407 12 HOH HOH . Q 5 HOH A 8 408 13 HOH HOH . Q 5 HOH A 9 409 14 HOH HOH . Q 5 HOH A 10 410 16 HOH HOH . Q 5 HOH A 11 411 17 HOH HOH . Q 5 HOH A 12 412 19 HOH HOH . Q 5 HOH A 13 413 20 HOH HOH . Q 5 HOH A 14 414 21 HOH HOH . Q 5 HOH A 15 415 22 HOH HOH . Q 5 HOH A 16 416 24 HOH HOH . Q 5 HOH A 17 417 25 HOH HOH . Q 5 HOH A 18 418 27 HOH HOH . Q 5 HOH A 19 419 29 HOH HOH . Q 5 HOH A 20 420 31 HOH HOH . Q 5 HOH A 21 421 34 HOH HOH . Q 5 HOH A 22 422 36 HOH HOH . Q 5 HOH A 23 423 45 HOH HOH . Q 5 HOH A 24 424 46 HOH HOH . Q 5 HOH A 25 425 48 HOH HOH . Q 5 HOH A 26 426 50 HOH HOH . Q 5 HOH A 27 427 51 HOH HOH . Q 5 HOH A 28 428 52 HOH HOH . Q 5 HOH A 29 429 53 HOH HOH . Q 5 HOH A 30 430 55 HOH HOH . Q 5 HOH A 31 431 56 HOH HOH . Q 5 HOH A 32 432 57 HOH HOH . Q 5 HOH A 33 433 60 HOH HOH . Q 5 HOH A 34 434 61 HOH HOH . Q 5 HOH A 35 435 62 HOH HOH . Q 5 HOH A 36 436 63 HOH HOH . Q 5 HOH A 37 437 64 HOH HOH . Q 5 HOH A 38 438 65 HOH HOH . Q 5 HOH A 39 439 66 HOH HOH . Q 5 HOH A 40 440 67 HOH HOH . Q 5 HOH A 41 441 69 HOH HOH . Q 5 HOH A 42 442 74 HOH HOH . Q 5 HOH A 43 443 76 HOH HOH . Q 5 HOH A 44 444 77 HOH HOH . Q 5 HOH A 45 445 79 HOH HOH . Q 5 HOH A 46 446 83 HOH HOH . Q 5 HOH A 47 447 84 HOH HOH . Q 5 HOH A 48 448 92 HOH HOH . Q 5 HOH A 49 449 95 HOH HOH . Q 5 HOH A 50 450 97 HOH HOH . Q 5 HOH A 51 451 98 HOH HOH . Q 5 HOH A 52 452 102 HOH HOH . Q 5 HOH A 53 453 114 HOH HOH . Q 5 HOH A 54 454 115 HOH HOH . Q 5 HOH A 55 455 116 HOH HOH . Q 5 HOH A 56 456 118 HOH HOH . Q 5 HOH A 57 457 120 HOH HOH . Q 5 HOH A 58 458 121 HOH HOH . Q 5 HOH A 59 459 123 HOH HOH . Q 5 HOH A 60 460 125 HOH HOH . Q 5 HOH A 61 461 128 HOH HOH . Q 5 HOH A 62 462 130 HOH HOH . Q 5 HOH A 63 463 131 HOH HOH . Q 5 HOH A 64 464 133 HOH HOH . R 5 HOH B 1 401 1 HOH HOH . R 5 HOH B 2 402 2 HOH HOH . R 5 HOH B 3 403 6 HOH HOH . R 5 HOH B 4 404 10 HOH HOH . R 5 HOH B 5 405 11 HOH HOH . R 5 HOH B 6 406 15 HOH HOH . R 5 HOH B 7 407 18 HOH HOH . R 5 HOH B 8 408 23 HOH HOH . R 5 HOH B 9 409 26 HOH HOH . R 5 HOH B 10 410 28 HOH HOH . R 5 HOH B 11 411 30 HOH HOH . R 5 HOH B 12 412 33 HOH HOH . R 5 HOH B 13 413 35 HOH HOH . R 5 HOH B 14 414 37 HOH HOH . R 5 HOH B 15 415 38 HOH HOH . R 5 HOH B 16 416 39 HOH HOH . R 5 HOH B 17 417 40 HOH HOH . R 5 HOH B 18 418 41 HOH HOH . R 5 HOH B 19 419 43 HOH HOH . R 5 HOH B 20 420 44 HOH HOH . R 5 HOH B 21 421 47 HOH HOH . R 5 HOH B 22 422 49 HOH HOH . R 5 HOH B 23 423 54 HOH HOH . R 5 HOH B 24 424 58 HOH HOH . R 5 HOH B 25 425 59 HOH HOH . R 5 HOH B 26 426 68 HOH HOH . R 5 HOH B 27 427 70 HOH HOH . R 5 HOH B 28 428 71 HOH HOH . R 5 HOH B 29 429 72 HOH HOH . R 5 HOH B 30 430 73 HOH HOH . R 5 HOH B 31 431 75 HOH HOH . R 5 HOH B 32 432 78 HOH HOH . R 5 HOH B 33 433 80 HOH HOH . R 5 HOH B 34 434 81 HOH HOH . R 5 HOH B 35 435 82 HOH HOH . R 5 HOH B 36 436 85 HOH HOH . R 5 HOH B 37 437 86 HOH HOH . R 5 HOH B 38 438 87 HOH HOH . R 5 HOH B 39 439 88 HOH HOH . R 5 HOH B 40 440 89 HOH HOH . R 5 HOH B 41 441 90 HOH HOH . R 5 HOH B 42 442 91 HOH HOH . R 5 HOH B 43 443 93 HOH HOH . R 5 HOH B 44 444 94 HOH HOH . R 5 HOH B 45 445 96 HOH HOH . R 5 HOH B 46 446 99 HOH HOH . R 5 HOH B 47 447 100 HOH HOH . R 5 HOH B 48 448 101 HOH HOH . R 5 HOH B 49 449 103 HOH HOH . R 5 HOH B 50 450 104 HOH HOH . R 5 HOH B 51 451 108 HOH HOH . R 5 HOH B 52 452 109 HOH HOH . R 5 HOH B 53 453 110 HOH HOH . R 5 HOH B 54 454 112 HOH HOH . R 5 HOH B 55 455 113 HOH HOH . R 5 HOH B 56 456 117 HOH HOH . R 5 HOH B 57 457 119 HOH HOH . R 5 HOH B 58 458 122 HOH HOH . R 5 HOH B 59 459 124 HOH HOH . R 5 HOH B 60 460 126 HOH HOH . R 5 HOH B 61 461 127 HOH HOH . R 5 HOH B 62 462 129 HOH HOH . R 5 HOH B 63 463 132 HOH HOH . R 5 HOH B 64 464 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 2 0.382 -33.007 41.417 1 51.07 ? S SO4 302 B 1 HETATM 2 O O1 SO4 . . . J 2 0.996 -31.714 41.059 1 56.52 ? O1 SO4 302 B 1 HETATM 3 O O2 SO4 . . . J 2 -0.195 -33.699 40.234 1 51.29 ? O2 SO4 302 B 1 HETATM 4 O O3 SO4 . . . J 2 1.406 -33.911 42.012 1 53.82 ? O3 SO4 302 B 1 HETATM 5 O O4 SO4 . . . J 2 -0.683 -32.707 42.394 1 52.44 ? O4 SO4 302 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 402 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #