data_4I09
#
_model_server_result.job_id            V4fblo6Z5jxeVnTYJ65aSQ 
_model_server_result.datetime_utc      '2024-11-28 12:04:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4i09 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    4I09 
#
_exptl.entry_id    4I09 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              329.206 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4I09 
_cell.length_a            50.26 
_cell.length_b            93.09 
_cell.length_c            105.42 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4I09 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H12 N5 O6 P' 
_chem_comp.formula_weight    329.206 
_chem_comp.id                CMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'CYCLIC AMP;CAMP' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P CMP doub 70 n n 
P O2P CMP sing 71 n n 
P O5' CMP sing 72 n n 
P O3' CMP sing 73 n n 
O2P HOP2 CMP sing 74 n n 
O5' C5' CMP sing 75 n n 
C5' C4' CMP sing 76 n n 
C5' "H5'1" CMP sing 77 n n 
C5' "H5'2" CMP sing 78 n n 
C4' O4' CMP sing 79 n n 
C4' C3' CMP sing 80 n n 
C4' H4' CMP sing 81 n n 
O4' C1' CMP sing 82 n n 
C3' O3' CMP sing 83 n n 
C3' C2' CMP sing 84 n n 
C3' H3' CMP sing 85 n n 
C2' O2' CMP sing 86 n n 
C2' C1' CMP sing 87 n n 
C2' H2' CMP sing 88 n n 
O2' HO2' CMP sing 89 n n 
C1' N9 CMP sing 90 n n 
C1' H1' CMP sing 91 n n 
N9 C8 CMP sing 92 n y 
N9 C4 CMP sing 93 n y 
C8 N7 CMP doub 94 n y 
C8 H8 CMP sing 95 n n 
N7 C5 CMP sing 96 n y 
C5 C6 CMP sing 97 n y 
C5 C4 CMP doub 98 n y 
C6 N6 CMP sing 99 n n 
C6 N1 CMP doub 100 n y 
N6 HN61 CMP sing 101 n n 
N6 HN62 CMP sing 102 n n 
N1 C2 CMP sing 103 n y 
C2 N3 CMP doub 104 n y 
C2 H2 CMP sing 105 n n 
N3 C4 CMP sing 106 n y 
#
_atom_sites.entry_id                     4I09 
_atom_sites.fract_transf_matrix[1][1]    0.019897 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010742 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009486 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CMP A 1 301 679 CMP CMP . 
D 2 CMP B 1 301 679 CMP CMP . 
E 3 HOH A 1 401 1 HOH HOH . 
E 3 HOH A 2 402 4 HOH HOH . 
E 3 HOH A 3 403 6 HOH HOH . 
E 3 HOH A 4 404 7 HOH HOH . 
E 3 HOH A 5 405 8 HOH HOH . 
E 3 HOH A 6 406 10 HOH HOH . 
E 3 HOH A 7 407 11 HOH HOH . 
E 3 HOH A 8 408 13 HOH HOH . 
E 3 HOH A 9 409 16 HOH HOH . 
E 3 HOH A 10 410 17 HOH HOH . 
E 3 HOH A 11 411 19 HOH HOH . 
E 3 HOH A 12 412 20 HOH HOH . 
E 3 HOH A 13 413 22 HOH HOH . 
E 3 HOH A 14 414 23 HOH HOH . 
E 3 HOH A 15 415 24 HOH HOH . 
E 3 HOH A 16 416 29 HOH HOH . 
E 3 HOH A 17 417 30 HOH HOH . 
E 3 HOH A 18 418 31 HOH HOH . 
E 3 HOH A 19 419 32 HOH HOH . 
E 3 HOH A 20 420 33 HOH HOH . 
E 3 HOH A 21 421 35 HOH HOH . 
E 3 HOH A 22 422 36 HOH HOH . 
E 3 HOH A 23 423 37 HOH HOH . 
E 3 HOH A 24 424 43 HOH HOH . 
E 3 HOH A 25 425 45 HOH HOH . 
E 3 HOH A 26 426 48 HOH HOH . 
E 3 HOH A 27 427 49 HOH HOH . 
E 3 HOH A 28 428 50 HOH HOH . 
E 3 HOH A 29 429 52 HOH HOH . 
E 3 HOH A 30 430 54 HOH HOH . 
E 3 HOH A 31 431 60 HOH HOH . 
E 3 HOH A 32 432 63 HOH HOH . 
E 3 HOH A 33 433 65 HOH HOH . 
E 3 HOH A 34 434 70 HOH HOH . 
E 3 HOH A 35 435 72 HOH HOH . 
E 3 HOH A 36 436 73 HOH HOH . 
E 3 HOH A 37 437 74 HOH HOH . 
E 3 HOH A 38 438 78 HOH HOH . 
E 3 HOH A 39 439 79 HOH HOH . 
E 3 HOH A 40 440 80 HOH HOH . 
E 3 HOH A 41 441 83 HOH HOH . 
E 3 HOH A 42 442 85 HOH HOH . 
E 3 HOH A 43 443 87 HOH HOH . 
E 3 HOH A 44 444 90 HOH HOH . 
E 3 HOH A 45 445 93 HOH HOH . 
E 3 HOH A 46 446 94 HOH HOH . 
E 3 HOH A 47 447 98 HOH HOH . 
E 3 HOH A 48 448 99 HOH HOH . 
E 3 HOH A 49 449 101 HOH HOH . 
E 3 HOH A 50 450 104 HOH HOH . 
E 3 HOH A 51 451 107 HOH HOH . 
E 3 HOH A 52 452 109 HOH HOH . 
E 3 HOH A 53 453 113 HOH HOH . 
E 3 HOH A 54 454 118 HOH HOH . 
E 3 HOH A 55 455 119 HOH HOH . 
E 3 HOH A 56 456 120 HOH HOH . 
E 3 HOH A 57 457 121 HOH HOH . 
E 3 HOH A 58 458 124 HOH HOH . 
F 3 HOH B 1 401 2 HOH HOH . 
F 3 HOH B 2 402 3 HOH HOH . 
F 3 HOH B 3 403 5 HOH HOH . 
F 3 HOH B 4 404 9 HOH HOH . 
F 3 HOH B 5 405 12 HOH HOH . 
F 3 HOH B 6 406 14 HOH HOH . 
F 3 HOH B 7 407 15 HOH HOH . 
F 3 HOH B 8 408 18 HOH HOH . 
F 3 HOH B 9 409 21 HOH HOH . 
F 3 HOH B 10 410 25 HOH HOH . 
F 3 HOH B 11 411 26 HOH HOH . 
F 3 HOH B 12 412 27 HOH HOH . 
F 3 HOH B 13 413 28 HOH HOH . 
F 3 HOH B 14 414 34 HOH HOH . 
F 3 HOH B 15 415 38 HOH HOH . 
F 3 HOH B 16 416 39 HOH HOH . 
F 3 HOH B 17 417 40 HOH HOH . 
F 3 HOH B 18 418 41 HOH HOH . 
F 3 HOH B 19 419 42 HOH HOH . 
F 3 HOH B 20 420 44 HOH HOH . 
F 3 HOH B 21 421 46 HOH HOH . 
F 3 HOH B 22 422 47 HOH HOH . 
F 3 HOH B 23 423 51 HOH HOH . 
F 3 HOH B 24 424 53 HOH HOH . 
F 3 HOH B 25 425 55 HOH HOH . 
F 3 HOH B 26 426 56 HOH HOH . 
F 3 HOH B 27 427 57 HOH HOH . 
F 3 HOH B 28 428 58 HOH HOH . 
F 3 HOH B 29 429 59 HOH HOH . 
F 3 HOH B 30 430 61 HOH HOH . 
F 3 HOH B 31 431 62 HOH HOH . 
F 3 HOH B 32 432 64 HOH HOH . 
F 3 HOH B 33 433 66 HOH HOH . 
F 3 HOH B 34 434 67 HOH HOH . 
F 3 HOH B 35 435 68 HOH HOH . 
F 3 HOH B 36 436 69 HOH HOH . 
F 3 HOH B 37 437 71 HOH HOH . 
F 3 HOH B 38 438 75 HOH HOH . 
F 3 HOH B 39 439 76 HOH HOH . 
F 3 HOH B 40 440 77 HOH HOH . 
F 3 HOH B 41 441 81 HOH HOH . 
F 3 HOH B 42 442 82 HOH HOH . 
F 3 HOH B 43 443 84 HOH HOH . 
F 3 HOH B 44 444 86 HOH HOH . 
F 3 HOH B 45 445 88 HOH HOH . 
F 3 HOH B 46 446 89 HOH HOH . 
F 3 HOH B 47 447 91 HOH HOH . 
F 3 HOH B 48 448 92 HOH HOH . 
F 3 HOH B 49 449 95 HOH HOH . 
F 3 HOH B 50 450 96 HOH HOH . 
F 3 HOH B 51 451 97 HOH HOH . 
F 3 HOH B 52 452 100 HOH HOH . 
F 3 HOH B 53 453 102 HOH HOH . 
F 3 HOH B 54 454 103 HOH HOH . 
F 3 HOH B 55 455 105 HOH HOH . 
F 3 HOH B 56 456 106 HOH HOH . 
F 3 HOH B 57 457 108 HOH HOH . 
F 3 HOH B 58 458 110 HOH HOH . 
F 3 HOH B 59 459 111 HOH HOH . 
F 3 HOH B 60 460 112 HOH HOH . 
F 3 HOH B 61 461 114 HOH HOH . 
F 3 HOH B 62 462 115 HOH HOH . 
F 3 HOH B 63 463 116 HOH HOH . 
F 3 HOH B 64 464 117 HOH HOH . 
F 3 HOH B 65 465 122 HOH HOH . 
F 3 HOH B 66 466 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P CMP . . . D 2 -3.007 -2.333 22.198 1 24.24 ? P CMP 301 B 1 
HETATM 2 O O1P CMP . . . D 2 -3.82 -1.857 23.393 1 25.17 ? O1P CMP 301 B 1 
HETATM 3 O O2P CMP . . . D 2 -1.98 -1.521 21.469 1 21.54 ? O2P CMP 301 B 1 
HETATM 4 O O5' CMP . . . D 2 -4.037 -2.871 21.049 1 26.55 ? O5' CMP 301 B 1 
HETATM 5 C C5' CMP . . . D 2 -3.518 -3.712 19.97 1 22.62 ? C5' CMP 301 B 1 
HETATM 6 C C4' CMP . . . D 2 -2.868 -4.896 20.664 1 23.52 ? C4' CMP 301 B 1 
HETATM 7 O O4' CMP . . . D 2 -2.209 -5.819 19.768 1 21.91 ? O4' CMP 301 B 1 
HETATM 8 C C3' CMP . . . D 2 -1.74 -4.437 21.539 1 21.35 ? C3' CMP 301 B 1 
HETATM 9 O O3' CMP . . . D 2 -2.275 -3.734 22.63 1 21.24 ? O3' CMP 301 B 1 
HETATM 10 C C2' CMP . . . D 2 -1.068 -5.748 21.852 1 20.62 ? C2' CMP 301 B 1 
HETATM 11 O O2' CMP . . . D 2 -1.836 -6.445 22.839 1 19.88 ? O2' CMP 301 B 1 
HETATM 12 C C1' CMP . . . D 2 -1.169 -6.457 20.511 1 22.74 ? C1' CMP 301 B 1 
HETATM 13 N N9 CMP . . . D 2 0.12 -6.242 19.784 1 21.13 ? N9 CMP 301 B 1 
HETATM 14 C C8 CMP . . . D 2 0.513 -5.091 19.179 1 20.76 ? C8 CMP 301 B 1 
HETATM 15 N N7 CMP . . . D 2 1.74 -5.266 18.633 1 19.65 ? N7 CMP 301 B 1 
HETATM 16 C C5 CMP . . . D 2 2.105 -6.574 18.9 1 20.23 ? C5 CMP 301 B 1 
HETATM 17 C C6 CMP . . . D 2 3.273 -7.424 18.581 1 20.56 ? C6 CMP 301 B 1 
HETATM 18 N N6 CMP . . . D 2 4.336 -6.937 17.838 1 18.32 ? N6 CMP 301 B 1 
HETATM 19 N N1 CMP . . . D 2 3.258 -8.724 19.004 1 20.22 ? N1 CMP 301 B 1 
HETATM 20 C C2 CMP . . . D 2 2.199 -9.237 19.687 1 20.15 ? C2 CMP 301 B 1 
HETATM 21 N N3 CMP . . . D 2 1.109 -8.491 19.982 1 22.79 ? N3 CMP 301 B 1 
HETATM 22 C C4 CMP . . . D 2 1.035 -7.172 19.604 1 20.51 ? C4 CMP 301 B 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           22 
#