data_4I12 # _model_server_result.job_id wDncBBRLK_OV_igScv6a-g _model_server_result.datetime_utc '2024-12-22 04:00:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i12 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 4I12 # _exptl.entry_id 4I12 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4I12 _cell.length_a 75.458 _cell.length_b 103.122 _cell.length_c 98.835 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I12 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 49.4175 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 161 A CYS 216 1_555 A SG CYS 365 A CYS 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf2 A SG CYS 223 A CYS 278 1_555 A SG CYS 388 A CYS 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf3 A SG CYS 275 A CYS 330 1_555 A SG CYS 325 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A ND1 HIS 55 A HIS 110 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc2 A OD2 ASP 137 A ASP 192 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc3 A OD1 ASP 137 A ASP 192 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc4 A ND1 HIS 402 A HIS 457 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc5 A ND1 HIS 403 A HIS 458 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc6 A NE2 HIS 404 A HIS 459 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.782 ? metalc ? metalc7 C ZN ZN . A ZN 502 1_555 H O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4I12 _atom_sites.fract_transf_matrix[1][1] 0.013252 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1BC A 1 501 1 1BC 180 . C 3 ZN A 1 502 1 ZN ZN . D 3 ZN A 1 503 2 ZN ZN . E 3 ZN A 1 504 3 ZN ZN . F 4 NA A 1 505 1 NA NA . G 4 NA A 1 506 1 NA NA . H 5 HOH A 1 601 1 HOH HOH . H 5 HOH A 2 602 2 HOH HOH . H 5 HOH A 3 603 3 HOH HOH . H 5 HOH A 4 604 4 HOH HOH . H 5 HOH A 5 605 5 HOH HOH . H 5 HOH A 6 606 6 HOH HOH . H 5 HOH A 7 607 7 HOH HOH . H 5 HOH A 8 608 8 HOH HOH . H 5 HOH A 9 609 9 HOH HOH . H 5 HOH A 10 610 10 HOH HOH . H 5 HOH A 11 611 11 HOH HOH . H 5 HOH A 12 612 12 HOH HOH . H 5 HOH A 13 613 13 HOH HOH . H 5 HOH A 14 614 14 HOH HOH . H 5 HOH A 15 615 15 HOH HOH . H 5 HOH A 16 616 16 HOH HOH . H 5 HOH A 17 617 17 HOH HOH . H 5 HOH A 18 618 18 HOH HOH . H 5 HOH A 19 619 19 HOH HOH . H 5 HOH A 20 620 20 HOH HOH . H 5 HOH A 21 621 21 HOH HOH . H 5 HOH A 22 622 22 HOH HOH . H 5 HOH A 23 623 23 HOH HOH . H 5 HOH A 24 624 24 HOH HOH . H 5 HOH A 25 625 25 HOH HOH . H 5 HOH A 26 626 26 HOH HOH . H 5 HOH A 27 627 27 HOH HOH . H 5 HOH A 28 628 28 HOH HOH . H 5 HOH A 29 629 29 HOH HOH . H 5 HOH A 30 630 30 HOH HOH . H 5 HOH A 31 631 31 HOH HOH . H 5 HOH A 32 632 32 HOH HOH . H 5 HOH A 33 633 33 HOH HOH . H 5 HOH A 34 634 34 HOH HOH . H 5 HOH A 35 635 35 HOH HOH . H 5 HOH A 36 636 36 HOH HOH . H 5 HOH A 37 637 37 HOH HOH . H 5 HOH A 38 638 38 HOH HOH . H 5 HOH A 39 639 39 HOH HOH . H 5 HOH A 40 640 40 HOH HOH . H 5 HOH A 41 641 41 HOH HOH . H 5 HOH A 42 642 42 HOH HOH . H 5 HOH A 43 643 43 HOH HOH . H 5 HOH A 44 644 44 HOH HOH . H 5 HOH A 45 645 45 HOH HOH . H 5 HOH A 46 646 46 HOH HOH . H 5 HOH A 47 647 47 HOH HOH . H 5 HOH A 48 648 48 HOH HOH . H 5 HOH A 49 649 49 HOH HOH . H 5 HOH A 50 650 50 HOH HOH . H 5 HOH A 51 651 51 HOH HOH . H 5 HOH A 52 652 52 HOH HOH . H 5 HOH A 53 653 53 HOH HOH . H 5 HOH A 54 654 54 HOH HOH . H 5 HOH A 55 655 55 HOH HOH . H 5 HOH A 56 656 56 HOH HOH . H 5 HOH A 57 657 57 HOH HOH . H 5 HOH A 58 658 58 HOH HOH . H 5 HOH A 59 659 59 HOH HOH . H 5 HOH A 60 660 60 HOH HOH . H 5 HOH A 61 661 61 HOH HOH . H 5 HOH A 62 662 62 HOH HOH . H 5 HOH A 63 663 63 HOH HOH . H 5 HOH A 64 664 64 HOH HOH . H 5 HOH A 65 665 65 HOH HOH . H 5 HOH A 66 666 66 HOH HOH . H 5 HOH A 67 667 67 HOH HOH . H 5 HOH A 68 668 68 HOH HOH . H 5 HOH A 69 669 69 HOH HOH . H 5 HOH A 70 670 70 HOH HOH . H 5 HOH A 71 671 71 HOH HOH . H 5 HOH A 72 672 72 HOH HOH . H 5 HOH A 73 673 73 HOH HOH . H 5 HOH A 74 674 74 HOH HOH . H 5 HOH A 75 675 75 HOH HOH . H 5 HOH A 76 676 76 HOH HOH . H 5 HOH A 77 677 78 HOH HOH . H 5 HOH A 78 678 79 HOH HOH . H 5 HOH A 79 679 80 HOH HOH . H 5 HOH A 80 680 81 HOH HOH . H 5 HOH A 81 681 82 HOH HOH . H 5 HOH A 82 682 83 HOH HOH . H 5 HOH A 83 683 84 HOH HOH . H 5 HOH A 84 684 85 HOH HOH . H 5 HOH A 85 685 86 HOH HOH . H 5 HOH A 86 686 87 HOH HOH . H 5 HOH A 87 687 88 HOH HOH . H 5 HOH A 88 688 89 HOH HOH . H 5 HOH A 89 689 90 HOH HOH . H 5 HOH A 90 690 91 HOH HOH . H 5 HOH A 91 691 92 HOH HOH . H 5 HOH A 92 692 93 HOH HOH . H 5 HOH A 93 693 94 HOH HOH . H 5 HOH A 94 694 95 HOH HOH . H 5 HOH A 95 695 96 HOH HOH . H 5 HOH A 96 696 97 HOH HOH . H 5 HOH A 97 697 98 HOH HOH . H 5 HOH A 98 698 99 HOH HOH . H 5 HOH A 99 699 100 HOH HOH . H 5 HOH A 100 700 101 HOH HOH . H 5 HOH A 101 701 102 HOH HOH . H 5 HOH A 102 702 103 HOH HOH . H 5 HOH A 103 703 104 HOH HOH . H 5 HOH A 104 704 105 HOH HOH . H 5 HOH A 105 705 106 HOH HOH . H 5 HOH A 106 706 107 HOH HOH . H 5 HOH A 107 707 108 HOH HOH . H 5 HOH A 108 708 109 HOH HOH . H 5 HOH A 109 709 110 HOH HOH . H 5 HOH A 110 710 111 HOH HOH . H 5 HOH A 111 711 112 HOH HOH . H 5 HOH A 112 712 113 HOH HOH . H 5 HOH A 113 713 114 HOH HOH . H 5 HOH A 114 714 115 HOH HOH . H 5 HOH A 115 715 116 HOH HOH . H 5 HOH A 116 716 117 HOH HOH . H 5 HOH A 117 717 118 HOH HOH . H 5 HOH A 118 718 119 HOH HOH . H 5 HOH A 119 719 120 HOH HOH . H 5 HOH A 120 720 121 HOH HOH . H 5 HOH A 121 721 122 HOH HOH . H 5 HOH A 122 722 123 HOH HOH . H 5 HOH A 123 723 124 HOH HOH . H 5 HOH A 124 724 125 HOH HOH . H 5 HOH A 125 725 126 HOH HOH . H 5 HOH A 126 726 127 HOH HOH . H 5 HOH A 127 727 128 HOH HOH . H 5 HOH A 128 728 129 HOH HOH . H 5 HOH A 129 729 130 HOH HOH . H 5 HOH A 130 730 131 HOH HOH . H 5 HOH A 131 731 132 HOH HOH . H 5 HOH A 132 732 133 HOH HOH . H 5 HOH A 133 733 134 HOH HOH . H 5 HOH A 134 734 135 HOH HOH . H 5 HOH A 135 735 136 HOH HOH . H 5 HOH A 136 736 137 HOH HOH . H 5 HOH A 137 737 138 HOH HOH . H 5 HOH A 138 738 139 HOH HOH . H 5 HOH A 139 739 140 HOH HOH . H 5 HOH A 140 740 141 HOH HOH . H 5 HOH A 141 741 142 HOH HOH . H 5 HOH A 142 742 143 HOH HOH . H 5 HOH A 143 743 144 HOH HOH . H 5 HOH A 144 744 145 HOH HOH . H 5 HOH A 145 745 146 HOH HOH . H 5 HOH A 146 746 147 HOH HOH . H 5 HOH A 147 747 149 HOH HOH . H 5 HOH A 148 748 150 HOH HOH . H 5 HOH A 149 749 151 HOH HOH . H 5 HOH A 150 750 152 HOH HOH . H 5 HOH A 151 751 153 HOH HOH . H 5 HOH A 152 752 154 HOH HOH . H 5 HOH A 153 753 155 HOH HOH . H 5 HOH A 154 754 156 HOH HOH . H 5 HOH A 155 755 157 HOH HOH . H 5 HOH A 156 756 158 HOH HOH . H 5 HOH A 157 757 159 HOH HOH . H 5 HOH A 158 758 160 HOH HOH . H 5 HOH A 159 759 161 HOH HOH . H 5 HOH A 160 760 162 HOH HOH . H 5 HOH A 161 761 163 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 38.842 _atom_site.Cartn_y 3.78 _atom_site.Cartn_z 5.925 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #