data_4I4J # _model_server_result.job_id b_knIfnp2yhWhrsvbg_H9Q _model_server_result.datetime_utc '2025-03-06 02:14:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":201}' # _entry.id 4I4J # _exptl.entry_id 4I4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D(-)-TARTARIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.6 _cell.angle_gamma 90 _cell.entry_id 4I4J _cell.length_a 57.416 _cell.length_b 184.526 _cell.length_c 59.401 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,O,P,Q,R 1 1 E,F,G,H,M,N,S,T,U,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 85 A ARG 82 1_555 A N MSE 86 A MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 86 A MSE 83 1_555 A N ARG 87 A ARG 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C CYS 123 A CYS 120 1_555 A N MSE 124 A MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 124 A MSE 121 1_555 A N ARG 125 A ARG 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 B C ARG 85 B ARG 82 1_555 B N MSE 86 B MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C MSE 86 B MSE 83 1_555 B N ARG 87 B ARG 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 B C CYS 123 B CYS 120 1_555 B N MSE 124 B MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 B C MSE 124 B MSE 121 1_555 B N ARG 125 B ARG 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale9 C C ARG 85 C ARG 82 1_555 C N MSE 86 C MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 C C MSE 86 C MSE 83 1_555 C N ARG 87 C ARG 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 C C CYS 123 C CYS 120 1_555 C N MSE 124 C MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 C C MSE 124 C MSE 121 1_555 C N ARG 125 C ARG 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 D C ARG 85 D ARG 82 1_555 D N MSE 86 D MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 D C MSE 86 D MSE 83 1_555 D N ARG 87 D ARG 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 D C CYS 123 D CYS 120 1_555 D N MSE 124 D MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale16 D C MSE 124 D MSE 121 1_555 D N ARG 125 D ARG 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 E C ARG 85 E ARG 82 1_555 E N MSE 86 E MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 E C MSE 86 E MSE 83 1_555 E N ARG 87 E ARG 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale19 E C CYS 123 E CYS 120 1_555 E N MSE 124 E MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale20 E C MSE 124 E MSE 121 1_555 E N ARG 125 E ARG 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale21 F C ARG 85 F ARG 82 1_555 F N MSE 86 F MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale22 F C MSE 86 F MSE 83 1_555 F N ARG 87 F ARG 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 F C CYS 123 F CYS 120 1_555 F N MSE 124 F MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale24 F C MSE 124 F MSE 121 1_555 F N ARG 125 F ARG 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale25 G C ARG 85 G ARG 82 1_555 G N MSE 86 G MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale26 G C MSE 86 G MSE 83 1_555 G N ARG 87 G ARG 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 G C CYS 123 G CYS 120 1_555 G N MSE 124 G MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale28 G C MSE 124 G MSE 121 1_555 G N ARG 125 G ARG 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale29 H C ARG 85 H ARG 82 1_555 H N MSE 86 H MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale30 H C MSE 86 H MSE 83 1_555 H N ARG 87 H ARG 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale31 H C CYS 123 H CYS 120 1_555 H N MSE 124 H MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale32 H C MSE 124 H MSE 121 1_555 H N ARG 125 H ARG 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TAR _chem_comp.mon_nstd_flag . _chem_comp.name 'D(-)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TAR doub 312 n n O11 C1 TAR sing 313 n n O11 HO1 TAR sing 314 n n C1 C2 TAR sing 315 n n C2 O2 TAR sing 316 n n C2 C3 TAR sing 317 n n C2 H2 TAR sing 318 n n O2 HO2 TAR sing 319 n n C3 O3 TAR sing 320 n n C3 C4 TAR sing 321 n n C3 H3 TAR sing 322 n n O3 HO3 TAR sing 323 n n C4 O4 TAR doub 324 n n C4 O41 TAR sing 325 n n O41 HO4 TAR sing 326 n n # _atom_sites.entry_id 4I4J _atom_sites.fract_transf_matrix[1][1] 0.017417 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001708 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005419 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016915 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 TAR A 1 201 150 TAR TAR . J 2 TAR B 1 201 150 TAR TAR . K 2 TAR C 1 201 150 TAR TAR . L 3 EDO C 1 202 150 EDO EDO . M 4 GOL F 1 201 150 GOL GOL . N 4 GOL F 1 202 150 GOL GOL . O 5 HOH A 1 301 24 HOH HOH . O 5 HOH A 2 302 52 HOH HOH . O 5 HOH A 3 303 67 HOH HOH . O 5 HOH A 4 304 78 HOH HOH . O 5 HOH A 5 305 88 HOH HOH . O 5 HOH A 6 306 91 HOH HOH . P 5 HOH B 1 301 3 HOH HOH . P 5 HOH B 2 302 5 HOH HOH . P 5 HOH B 3 303 11 HOH HOH . P 5 HOH B 4 304 17 HOH HOH . P 5 HOH B 5 305 18 HOH HOH . P 5 HOH B 6 306 23 HOH HOH . P 5 HOH B 7 307 32 HOH HOH . P 5 HOH B 8 308 33 HOH HOH . P 5 HOH B 9 309 36 HOH HOH . P 5 HOH B 10 310 37 HOH HOH . P 5 HOH B 11 311 51 HOH HOH . P 5 HOH B 12 312 54 HOH HOH . P 5 HOH B 13 313 55 HOH HOH . P 5 HOH B 14 314 62 HOH HOH . P 5 HOH B 15 315 63 HOH HOH . P 5 HOH B 16 316 65 HOH HOH . P 5 HOH B 17 317 87 HOH HOH . P 5 HOH B 18 318 93 HOH HOH . P 5 HOH B 19 319 95 HOH HOH . Q 5 HOH C 1 301 13 HOH HOH . Q 5 HOH C 2 302 14 HOH HOH . Q 5 HOH C 3 303 22 HOH HOH . Q 5 HOH C 4 304 34 HOH HOH . Q 5 HOH C 5 305 39 HOH HOH . Q 5 HOH C 6 306 66 HOH HOH . Q 5 HOH C 7 307 68 HOH HOH . Q 5 HOH C 8 308 69 HOH HOH . Q 5 HOH C 9 309 70 HOH HOH . Q 5 HOH C 10 310 77 HOH HOH . Q 5 HOH C 11 311 79 HOH HOH . Q 5 HOH C 12 312 81 HOH HOH . R 5 HOH D 1 201 2 HOH HOH . R 5 HOH D 2 202 4 HOH HOH . R 5 HOH D 3 203 6 HOH HOH . R 5 HOH D 4 204 9 HOH HOH . R 5 HOH D 5 205 15 HOH HOH . R 5 HOH D 6 206 16 HOH HOH . R 5 HOH D 7 207 25 HOH HOH . R 5 HOH D 8 208 29 HOH HOH . R 5 HOH D 9 209 35 HOH HOH . R 5 HOH D 10 210 40 HOH HOH . R 5 HOH D 11 211 50 HOH HOH . R 5 HOH D 12 212 53 HOH HOH . R 5 HOH D 13 213 60 HOH HOH . R 5 HOH D 14 214 61 HOH HOH . R 5 HOH D 15 215 73 HOH HOH . R 5 HOH D 16 216 76 HOH HOH . R 5 HOH D 17 217 82 HOH HOH . R 5 HOH D 18 218 89 HOH HOH . S 5 HOH E 1 201 28 HOH HOH . S 5 HOH E 2 202 31 HOH HOH . S 5 HOH E 3 203 42 HOH HOH . S 5 HOH E 4 204 59 HOH HOH . S 5 HOH E 5 205 85 HOH HOH . S 5 HOH E 6 206 90 HOH HOH . T 5 HOH F 1 301 30 HOH HOH . T 5 HOH F 2 302 49 HOH HOH . T 5 HOH F 3 303 64 HOH HOH . T 5 HOH F 4 304 71 HOH HOH . T 5 HOH F 5 305 83 HOH HOH . T 5 HOH F 6 306 84 HOH HOH . T 5 HOH F 7 307 94 HOH HOH . U 5 HOH G 1 201 1 HOH HOH . U 5 HOH G 2 202 19 HOH HOH . U 5 HOH G 3 203 20 HOH HOH . U 5 HOH G 4 204 27 HOH HOH . U 5 HOH G 5 205 41 HOH HOH . U 5 HOH G 6 206 46 HOH HOH . U 5 HOH G 7 207 47 HOH HOH . U 5 HOH G 8 208 56 HOH HOH . U 5 HOH G 9 209 74 HOH HOH . U 5 HOH G 10 210 75 HOH HOH . V 5 HOH H 1 201 7 HOH HOH . V 5 HOH H 2 202 8 HOH HOH . V 5 HOH H 3 203 10 HOH HOH . V 5 HOH H 4 204 12 HOH HOH . V 5 HOH H 5 205 21 HOH HOH . V 5 HOH H 6 206 26 HOH HOH . V 5 HOH H 7 207 38 HOH HOH . V 5 HOH H 8 208 43 HOH HOH . V 5 HOH H 9 209 44 HOH HOH . V 5 HOH H 10 210 45 HOH HOH . V 5 HOH H 11 211 48 HOH HOH . V 5 HOH H 12 212 57 HOH HOH . V 5 HOH H 13 213 58 HOH HOH . V 5 HOH H 14 214 72 HOH HOH . V 5 HOH H 15 215 80 HOH HOH . V 5 HOH H 16 216 86 HOH HOH . V 5 HOH H 17 217 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TAR . . . K 2 7.892 19.189 26.548 1 56.99 ? O1 TAR 201 C 1 HETATM 2 O O11 TAR . . . K 2 7.793 20.979 25.282 1 58.43 ? O11 TAR 201 C 1 HETATM 3 C C1 TAR . . . K 2 8.439 20.093 25.88 1 57.8 ? C1 TAR 201 C 1 HETATM 4 C C2 TAR . . . K 2 9.936 20.122 25.794 1 56.87 ? C2 TAR 201 C 1 HETATM 5 O O2 TAR . . . K 2 10.341 19.996 24.426 1 55.92 ? O2 TAR 201 C 1 HETATM 6 C C3 TAR . . . K 2 10.446 21.441 26.366 1 55.57 ? C3 TAR 201 C 1 HETATM 7 O O3 TAR . . . K 2 9.395 22.414 26.351 1 54.84 ? O3 TAR 201 C 1 HETATM 8 C C4 TAR . . . K 2 11.601 21.934 25.546 1 54.43 ? C4 TAR 201 C 1 HETATM 9 O O4 TAR . . . K 2 12.688 22.161 26.121 1 54.2 ? O4 TAR 201 C 1 HETATM 10 O O41 TAR . . . K 2 11.43 22.102 24.318 1 53.33 ? O41 TAR 201 C 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #