data_4I4K # _model_server_result.job_id 4Sfl42iRRBuOLoif_ZiNww _model_server_result.datetime_utc '2025-03-06 02:03:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4I4K # _exptl.entry_id 4I4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 121.58 _cell.angle_gamma 90 _cell.entry_id 4I4K _cell.length_a 72.715 _cell.length_b 86.901 _cell.length_c 55.265 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 49 A THR 46 1_555 A N MSE 50 A MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 50 A MSE 47 1_555 A N ILE 51 A ILE 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C HIS 66 A HIS 63 1_555 A N MSE 67 A MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale4 A C MSE 67 A MSE 64 1_555 A N ALA 68 A ALA 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 B C THR 49 B THR 46 1_555 B N MSE 50 B MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 B C MSE 50 B MSE 47 1_555 B N ILE 51 B ILE 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 B C HIS 66 B HIS 63 1_555 B N MSE 67 B MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 B C MSE 67 B MSE 64 1_555 B N ALA 68 B ALA 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 107 n n C1 O2 CIT sing 108 n n C1 C2 CIT sing 109 n n O2 HO2 CIT sing 110 n n C2 C3 CIT sing 111 n n C2 H21 CIT sing 112 n n C2 H22 CIT sing 113 n n C3 O7 CIT sing 114 n n C3 C4 CIT sing 115 n n C3 C6 CIT sing 116 n n O7 HO7 CIT sing 117 n n C4 C5 CIT sing 118 n n C4 H41 CIT sing 119 n n C4 H42 CIT sing 120 n n C5 O3 CIT doub 121 n n C5 O4 CIT sing 122 n n O4 HO4 CIT sing 123 n n C6 O5 CIT doub 124 n n C6 O6 CIT sing 125 n n O6 HO6 CIT sing 126 n n # _atom_sites.entry_id 4I4K _atom_sites.fract_transf_matrix[1][1] 0.013752 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008456 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 201 151 CIT CIT . D 3 PG4 A 1 202 152 PG4 PG4 . E 4 GOL A 1 203 155 GOL GOL . F 5 PO4 A 1 204 153 PO4 PO4 . G 2 CIT B 1 201 151 CIT CIT . H 6 1PE B 1 202 152 1PE 1PE . I 7 HOH A 1 301 2 HOH HOH . I 7 HOH A 2 302 3 HOH HOH . I 7 HOH A 3 303 4 HOH HOH . I 7 HOH A 4 304 5 HOH HOH . I 7 HOH A 5 305 7 HOH HOH . I 7 HOH A 6 306 8 HOH HOH . I 7 HOH A 7 307 10 HOH HOH . I 7 HOH A 8 308 11 HOH HOH . I 7 HOH A 9 309 13 HOH HOH . I 7 HOH A 10 310 17 HOH HOH . I 7 HOH A 11 311 18 HOH HOH . I 7 HOH A 12 312 22 HOH HOH . I 7 HOH A 13 313 24 HOH HOH . I 7 HOH A 14 314 25 HOH HOH . I 7 HOH A 15 315 27 HOH HOH . I 7 HOH A 16 316 28 HOH HOH . I 7 HOH A 17 317 30 HOH HOH . I 7 HOH A 18 318 31 HOH HOH . I 7 HOH A 19 319 32 HOH HOH . I 7 HOH A 20 320 35 HOH HOH . I 7 HOH A 21 321 36 HOH HOH . I 7 HOH A 22 322 37 HOH HOH . I 7 HOH A 23 323 38 HOH HOH . I 7 HOH A 24 324 39 HOH HOH . I 7 HOH A 25 325 40 HOH HOH . I 7 HOH A 26 326 42 HOH HOH . I 7 HOH A 27 327 43 HOH HOH . I 7 HOH A 28 328 46 HOH HOH . I 7 HOH A 29 329 49 HOH HOH . I 7 HOH A 30 330 51 HOH HOH . I 7 HOH A 31 331 53 HOH HOH . I 7 HOH A 32 332 54 HOH HOH . I 7 HOH A 33 333 55 HOH HOH . I 7 HOH A 34 334 56 HOH HOH . I 7 HOH A 35 335 58 HOH HOH . I 7 HOH A 36 336 59 HOH HOH . I 7 HOH A 37 337 60 HOH HOH . I 7 HOH A 38 338 61 HOH HOH . I 7 HOH A 39 339 62 HOH HOH . I 7 HOH A 40 340 66 HOH HOH . I 7 HOH A 41 341 68 HOH HOH . I 7 HOH A 42 342 69 HOH HOH . I 7 HOH A 43 343 70 HOH HOH . I 7 HOH A 44 344 71 HOH HOH . I 7 HOH A 45 345 72 HOH HOH . I 7 HOH A 46 346 73 HOH HOH . I 7 HOH A 47 347 75 HOH HOH . I 7 HOH A 48 348 76 HOH HOH . I 7 HOH A 49 349 78 HOH HOH . I 7 HOH A 50 350 79 HOH HOH . I 7 HOH A 51 351 80 HOH HOH . I 7 HOH A 52 352 81 HOH HOH . I 7 HOH A 53 353 82 HOH HOH . I 7 HOH A 54 354 83 HOH HOH . I 7 HOH A 55 355 84 HOH HOH . I 7 HOH A 56 356 86 HOH HOH . I 7 HOH A 57 357 87 HOH HOH . I 7 HOH A 58 358 89 HOH HOH . I 7 HOH A 59 359 90 HOH HOH . I 7 HOH A 60 360 91 HOH HOH . I 7 HOH A 61 361 92 HOH HOH . I 7 HOH A 62 362 93 HOH HOH . I 7 HOH A 63 363 97 HOH HOH . I 7 HOH A 64 364 98 HOH HOH . I 7 HOH A 65 365 99 HOH HOH . I 7 HOH A 66 366 100 HOH HOH . I 7 HOH A 67 367 101 HOH HOH . I 7 HOH A 68 368 102 HOH HOH . I 7 HOH A 69 369 104 HOH HOH . I 7 HOH A 70 370 105 HOH HOH . I 7 HOH A 71 371 106 HOH HOH . I 7 HOH A 72 372 108 HOH HOH . I 7 HOH A 73 373 112 HOH HOH . I 7 HOH A 74 374 113 HOH HOH . I 7 HOH A 75 375 114 HOH HOH . I 7 HOH A 76 376 115 HOH HOH . I 7 HOH A 77 377 116 HOH HOH . I 7 HOH A 78 378 117 HOH HOH . I 7 HOH A 79 379 129 HOH HOH . I 7 HOH A 80 380 130 HOH HOH . I 7 HOH A 81 381 131 HOH HOH . I 7 HOH A 82 382 132 HOH HOH . I 7 HOH A 83 383 133 HOH HOH . I 7 HOH A 84 384 134 HOH HOH . I 7 HOH A 85 385 135 HOH HOH . I 7 HOH A 86 386 136 HOH HOH . I 7 HOH A 87 387 137 HOH HOH . I 7 HOH A 88 388 138 HOH HOH . I 7 HOH A 89 389 139 HOH HOH . I 7 HOH A 90 390 140 HOH HOH . I 7 HOH A 91 391 145 HOH HOH . I 7 HOH A 92 392 146 HOH HOH . I 7 HOH A 93 393 147 HOH HOH . I 7 HOH A 94 394 148 HOH HOH . I 7 HOH A 95 395 149 HOH HOH . I 7 HOH A 96 396 150 HOH HOH . I 7 HOH A 97 397 151 HOH HOH . I 7 HOH A 98 398 152 HOH HOH . I 7 HOH A 99 399 153 HOH HOH . I 7 HOH A 100 400 154 HOH HOH . I 7 HOH A 101 401 155 HOH HOH . I 7 HOH A 102 402 156 HOH HOH . I 7 HOH A 103 403 157 HOH HOH . I 7 HOH A 104 404 158 HOH HOH . I 7 HOH A 105 405 159 HOH HOH . I 7 HOH A 106 406 160 HOH HOH . I 7 HOH A 107 407 161 HOH HOH . I 7 HOH A 108 408 162 HOH HOH . I 7 HOH A 109 409 163 HOH HOH . I 7 HOH A 110 410 183 HOH HOH . I 7 HOH A 111 411 188 HOH HOH . I 7 HOH A 112 412 189 HOH HOH . I 7 HOH A 113 413 190 HOH HOH . I 7 HOH A 114 414 191 HOH HOH . I 7 HOH A 115 415 192 HOH HOH . I 7 HOH A 116 416 194 HOH HOH . I 7 HOH A 117 417 195 HOH HOH . I 7 HOH A 118 418 198 HOH HOH . I 7 HOH A 119 419 199 HOH HOH . I 7 HOH A 120 420 200 HOH HOH . I 7 HOH A 121 421 201 HOH HOH . I 7 HOH A 122 422 202 HOH HOH . I 7 HOH A 123 423 203 HOH HOH . I 7 HOH A 124 424 204 HOH HOH . I 7 HOH A 125 425 205 HOH HOH . I 7 HOH A 126 426 206 HOH HOH . I 7 HOH A 127 427 207 HOH HOH . I 7 HOH A 128 428 208 HOH HOH . I 7 HOH A 129 429 209 HOH HOH . I 7 HOH A 130 430 210 HOH HOH . J 7 HOH B 1 301 1 HOH HOH . J 7 HOH B 2 302 6 HOH HOH . J 7 HOH B 3 303 9 HOH HOH . J 7 HOH B 4 304 12 HOH HOH . J 7 HOH B 5 305 14 HOH HOH . J 7 HOH B 6 306 15 HOH HOH . J 7 HOH B 7 307 16 HOH HOH . J 7 HOH B 8 308 19 HOH HOH . J 7 HOH B 9 309 20 HOH HOH . J 7 HOH B 10 310 21 HOH HOH . J 7 HOH B 11 311 23 HOH HOH . J 7 HOH B 12 312 26 HOH HOH . J 7 HOH B 13 313 29 HOH HOH . J 7 HOH B 14 314 33 HOH HOH . J 7 HOH B 15 315 34 HOH HOH . J 7 HOH B 16 316 41 HOH HOH . J 7 HOH B 17 317 44 HOH HOH . J 7 HOH B 18 318 45 HOH HOH . J 7 HOH B 19 319 47 HOH HOH . J 7 HOH B 20 320 48 HOH HOH . J 7 HOH B 21 321 50 HOH HOH . J 7 HOH B 22 322 52 HOH HOH . J 7 HOH B 23 323 57 HOH HOH . J 7 HOH B 24 324 63 HOH HOH . J 7 HOH B 25 325 64 HOH HOH . J 7 HOH B 26 326 65 HOH HOH . J 7 HOH B 27 327 67 HOH HOH . J 7 HOH B 28 328 74 HOH HOH . J 7 HOH B 29 329 77 HOH HOH . J 7 HOH B 30 330 85 HOH HOH . J 7 HOH B 31 331 88 HOH HOH . J 7 HOH B 32 332 94 HOH HOH . J 7 HOH B 33 333 95 HOH HOH . J 7 HOH B 34 334 96 HOH HOH . J 7 HOH B 35 335 103 HOH HOH . J 7 HOH B 36 336 107 HOH HOH . J 7 HOH B 37 337 109 HOH HOH . J 7 HOH B 38 338 110 HOH HOH . J 7 HOH B 39 339 111 HOH HOH . J 7 HOH B 40 340 118 HOH HOH . J 7 HOH B 41 341 119 HOH HOH . J 7 HOH B 42 342 120 HOH HOH . J 7 HOH B 43 343 121 HOH HOH . J 7 HOH B 44 344 122 HOH HOH . J 7 HOH B 45 345 123 HOH HOH . J 7 HOH B 46 346 124 HOH HOH . J 7 HOH B 47 347 125 HOH HOH . J 7 HOH B 48 348 126 HOH HOH . J 7 HOH B 49 349 127 HOH HOH . J 7 HOH B 50 350 128 HOH HOH . J 7 HOH B 51 351 141 HOH HOH . J 7 HOH B 52 352 142 HOH HOH . J 7 HOH B 53 353 143 HOH HOH . J 7 HOH B 54 354 144 HOH HOH . J 7 HOH B 55 355 164 HOH HOH . J 7 HOH B 56 356 165 HOH HOH . J 7 HOH B 57 357 166 HOH HOH . J 7 HOH B 58 358 167 HOH HOH . J 7 HOH B 59 359 168 HOH HOH . J 7 HOH B 60 360 169 HOH HOH . J 7 HOH B 61 361 170 HOH HOH . J 7 HOH B 62 362 171 HOH HOH . J 7 HOH B 63 363 172 HOH HOH . J 7 HOH B 64 364 173 HOH HOH . J 7 HOH B 65 365 174 HOH HOH . J 7 HOH B 66 366 175 HOH HOH . J 7 HOH B 67 367 176 HOH HOH . J 7 HOH B 68 368 177 HOH HOH . J 7 HOH B 69 369 178 HOH HOH . J 7 HOH B 70 370 179 HOH HOH . J 7 HOH B 71 371 180 HOH HOH . J 7 HOH B 72 372 181 HOH HOH . J 7 HOH B 73 373 182 HOH HOH . J 7 HOH B 74 374 184 HOH HOH . J 7 HOH B 75 375 185 HOH HOH . J 7 HOH B 76 376 186 HOH HOH . J 7 HOH B 77 377 187 HOH HOH . J 7 HOH B 78 378 193 HOH HOH . J 7 HOH B 79 379 196 HOH HOH . J 7 HOH B 80 380 197 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . A . C 2 34.212 71.636 -1.227 0.25 19.33 ? C1 CIT 201 A 1 HETATM 2 C C1 CIT . B . C 2 38.508 71.625 1.244 0.25 19.28 ? C1 CIT 201 A 1 HETATM 3 O O1 CIT . A . C 2 33.688 72.685 -0.788 0.25 18.05 ? O1 CIT 201 A 1 HETATM 4 O O1 CIT . B . C 2 38.874 71.225 2.374 0.25 18.61 ? O1 CIT 201 A 1 HETATM 5 O O2 CIT . A . C 2 33.917 71.253 -2.382 0.25 19.1 ? O2 CIT 201 A 1 HETATM 6 O O2 CIT . B . C 2 38.986 72.693 0.799 0.25 18.09 ? O2 CIT 201 A 1 HETATM 7 C C2 CIT . A . C 2 35.16 70.843 -0.357 0.25 19.24 ? C2 CIT 201 A 1 HETATM 8 C C2 CIT . B . C 2 37.529 70.826 0.414 0.25 19.23 ? C2 CIT 201 A 1 HETATM 9 C C3 CIT . A . C 2 36.321 71.699 0.146 0.25 18.84 ? C3 CIT 201 A 1 HETATM 10 C C3 CIT . B . C 2 36.398 71.694 -0.136 0.25 18.85 ? C3 CIT 201 A 1 HETATM 11 O O7 CIT . A . C 2 35.876 72.384 1.343 0.25 21.34 ? O7 CIT 201 A 1 HETATM 12 O O7 CIT . B . C 2 36.889 72.364 -1.323 0.25 21.26 ? O7 CIT 201 A 1 HETATM 13 C C4 CIT . A . C 2 37.536 70.833 0.471 0.25 19.21 ? C4 CIT 201 A 1 HETATM 14 C C4 CIT . B . C 2 35.184 70.836 -0.487 0.25 19.19 ? C4 CIT 201 A 1 HETATM 15 C C5 CIT . A . C 2 38.496 71.581 1.369 0.25 18.97 ? C5 CIT 201 A 1 HETATM 16 C C5 CIT . B . C 2 34.223 71.59 -1.38 0.25 18.95 ? C5 CIT 201 A 1 HETATM 17 O O3 CIT . A . C 2 38.971 72.678 1 0.25 18.43 ? O3 CIT 201 A 1 HETATM 18 O O3 CIT . B . C 2 33.746 72.685 -1.006 0.25 18.42 ? O3 CIT 201 A 1 HETATM 19 O O4 CIT . A . C 2 38.857 71.121 2.477 0.25 19.16 ? O4 CIT 201 A 1 HETATM 20 O O4 CIT . B . C 2 33.861 71.136 -2.489 0.25 19.17 ? O4 CIT 201 A 1 HETATM 21 C C6 CIT . A . C 2 36.682 72.757 -0.884 0.25 20.02 ? C6 CIT 201 A 1 HETATM 22 C C6 CIT . B . C 2 36.019 72.761 0.879 0.25 20 ? C6 CIT 201 A 1 HETATM 23 O O5 CIT . A . C 2 36.386 73.959 -0.686 0.25 20.66 ? O5 CIT 201 A 1 HETATM 24 O O5 CIT . B . C 2 36.298 73.964 0.665 0.25 20.46 ? O5 CIT 201 A 1 HETATM 25 O O6 CIT . A . C 2 37.263 72.44 -1.945 0.25 19.32 ? O6 CIT 201 A 1 HETATM 26 O O6 CIT . B . C 2 35.443 72.447 1.943 0.25 19.25 ? O6 CIT 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #