data_4I58
#
_model_server_result.job_id            d280gNhqO2ArzIjVtLIA0Q 
_model_server_result.datetime_utc      '2025-02-05 10:53:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4i58 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    4I58 
#
_exptl.entry_id    4I58 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4I58 
_cell.length_a            217.715 
_cell.length_b            234.588 
_cell.length_c            90.047 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4I58 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E 1 1 
B,F 2 1 
C,G 3 1 
D,H 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     4I58 
_atom_sites.fract_transf_matrix[1][1]    0.004593 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004263 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011105 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 501 489 FAD FAD . 
F 2 FAD B 1 501 489 FAD FAD . 
G 2 FAD C 1 501 489 FAD FAD . 
H 2 FAD D 1 501 489 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . F 2 133.018 -61.624 135.255 1 26.05 ? PA FAD 501 B 1 
HETATM 2 O O1A FAD . . . F 2 132.285 -61.439 136.533 1 25.3 ? O1A FAD 501 B 1 
HETATM 3 O O2A FAD . . . F 2 132.304 -61.689 133.949 1 24.71 ? O2A FAD 501 B 1 
HETATM 4 O O5B FAD . . . F 2 133.927 -62.945 135.343 1 26.64 ? O5B FAD 501 B 1 
HETATM 5 C C5B FAD . . . F 2 134.763 -63.23 136.482 1 22.47 ? C5B FAD 501 B 1 
HETATM 6 C C4B FAD . . . F 2 134.978 -64.752 136.477 1 20.33 ? C4B FAD 501 B 1 
HETATM 7 O O4B FAD . . . F 2 135.665 -65.08 137.67 1 19.49 ? O4B FAD 501 B 1 
HETATM 8 C C3B FAD . . . F 2 133.688 -65.575 136.475 1 19.59 ? C3B FAD 501 B 1 
HETATM 9 O O3B FAD . . . F 2 133.585 -66.436 135.361 1 18.92 ? O3B FAD 501 B 1 
HETATM 10 C C2B FAD . . . F 2 133.713 -66.294 137.794 1 18.75 ? C2B FAD 501 B 1 
HETATM 11 O O2B FAD . . . F 2 133.094 -67.559 137.783 1 19.93 ? O2B FAD 501 B 1 
HETATM 12 C C1B FAD . . . F 2 135.203 -66.319 138.14 1 18.7 ? C1B FAD 501 B 1 
HETATM 13 N N9A FAD . . . F 2 135.544 -66.374 139.567 1 19.64 ? N9A FAD 501 B 1 
HETATM 14 C C8A FAD . . . F 2 135.003 -65.623 140.593 1 20.85 ? C8A FAD 501 B 1 
HETATM 15 N N7A FAD . . . F 2 135.546 -65.918 141.782 1 21.12 ? N7A FAD 501 B 1 
HETATM 16 C C5A FAD . . . F 2 136.473 -66.903 141.507 1 21.35 ? C5A FAD 501 B 1 
HETATM 17 C C6A FAD . . . F 2 137.37 -67.616 142.333 1 21.35 ? C6A FAD 501 B 1 
HETATM 18 N N6A FAD . . . F 2 137.469 -67.435 143.627 1 23.78 ? N6A FAD 501 B 1 
HETATM 19 N N1A FAD . . . F 2 138.183 -68.558 141.737 1 21.35 ? N1A FAD 501 B 1 
HETATM 20 C C2A FAD . . . F 2 138.106 -68.772 140.378 1 20.72 ? C2A FAD 501 B 1 
HETATM 21 N N3A FAD . . . F 2 137.277 -68.123 139.528 1 19.55 ? N3A FAD 501 B 1 
HETATM 22 C C4A FAD . . . F 2 136.481 -67.194 140.135 1 20.77 ? C4A FAD 501 B 1 
HETATM 23 N N1 FAD . . . F 2 128.082 -54.945 129.746 1 34.4 ? N1 FAD 501 B 1 
HETATM 24 C C2 FAD . . . F 2 128.042 -54.364 128.493 1 34.9 ? C2 FAD 501 B 1 
HETATM 25 O O2 FAD . . . F 2 129.033 -53.853 127.999 1 36.44 ? O2 FAD 501 B 1 
HETATM 26 N N3 FAD . . . F 2 126.828 -54.38 127.789 1 35.23 ? N3 FAD 501 B 1 
HETATM 27 C C4 FAD . . . F 2 125.653 -54.944 128.266 1 35.09 ? C4 FAD 501 B 1 
HETATM 28 O O4 FAD . . . F 2 124.602 -54.925 127.578 1 36.38 ? O4 FAD 501 B 1 
HETATM 29 C C4X FAD . . . F 2 125.704 -55.55 129.545 1 33.78 ? C4X FAD 501 B 1 
HETATM 30 N N5 FAD . . . F 2 124.572 -56.157 130.085 1 33.06 ? N5 FAD 501 B 1 
HETATM 31 C C5X FAD . . . F 2 124.616 -56.773 131.32 1 31.48 ? C5X FAD 501 B 1 
HETATM 32 C C6 FAD . . . F 2 123.477 -57.4 131.818 1 31.74 ? C6 FAD 501 B 1 
HETATM 33 C C7 FAD . . . F 2 123.463 -58.066 133.058 1 30.89 ? C7 FAD 501 B 1 
HETATM 34 C C7M FAD . . . F 2 122.192 -58.735 133.524 1 29.93 ? C7M FAD 501 B 1 
HETATM 35 C C8 FAD . . . F 2 124.677 -58.084 133.831 1 31.04 ? C8 FAD 501 B 1 
HETATM 36 C C8M FAD . . . F 2 124.758 -58.781 135.161 1 31.41 ? C8M FAD 501 B 1 
HETATM 37 C C9 FAD . . . F 2 125.844 -57.442 133.345 1 31.97 ? C9 FAD 501 B 1 
HETATM 38 C C9A FAD . . . F 2 125.848 -56.778 132.085 1 31.61 ? C9A FAD 501 B 1 
HETATM 39 N N10 FAD . . . F 2 127.019 -56.132 131.539 1 31.07 ? N10 FAD 501 B 1 
HETATM 40 C C10 FAD . . . F 2 126.946 -55.525 130.266 1 32.63 ? C10 FAD 501 B 1 
HETATM 41 C C1' FAD . . . F 2 128.342 -56.092 132.286 1 27.45 ? C1' FAD 501 B 1 
HETATM 42 C C2' FAD . . . F 2 129.331 -57.153 131.82 1 26.51 ? C2' FAD 501 B 1 
HETATM 43 O O2' FAD . . . F 2 128.725 -58.392 132.003 1 26.28 ? O2' FAD 501 B 1 
HETATM 44 C C3' FAD . . . F 2 130.637 -57.078 132.639 1 26.58 ? C3' FAD 501 B 1 
HETATM 45 O O3' FAD . . . F 2 131.294 -55.816 132.478 1 27.76 ? O3' FAD 501 B 1 
HETATM 46 C C4' FAD . . . F 2 131.735 -58.098 132.273 1 26.05 ? C4' FAD 501 B 1 
HETATM 47 O O4' FAD . . . F 2 131.232 -59.4 131.955 1 26.36 ? O4' FAD 501 B 1 
HETATM 48 C C5' FAD . . . F 2 132.723 -58.201 133.421 1 25.83 ? C5' FAD 501 B 1 
HETATM 49 O O5' FAD . . . F 2 133.686 -59.166 133.017 1 24.48 ? O5' FAD 501 B 1 
HETATM 50 P P FAD . . . F 2 134.796 -59.72 133.967 1 25.3 ? P FAD 501 B 1 
HETATM 51 O O1P FAD . . . F 2 135.527 -60.682 133.116 1 26.5 ? O1P FAD 501 B 1 
HETATM 52 O O2P FAD . . . F 2 135.618 -58.613 134.572 1 24.88 ? O2P FAD 501 B 1 
HETATM 53 O O3P FAD . . . F 2 134.057 -60.407 135.18 1 26.32 ? O3P FAD 501 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#