data_4I59
#
_model_server_result.job_id            Pf1yalYqY0HqMTADf31XCQ 
_model_server_result.datetime_utc      '2025-07-17 08:30:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4i59 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":501}' 
#
_entry.id    4I59 
#
_exptl.entry_id    4I59 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4I59 
_cell.length_a            86.518 
_cell.length_b            139.457 
_cell.length_c            177.206 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4I59 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F 1 1 
B,G,H 2 1 
C,I,J 3 1 
D,K,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 100 n n 
PA O2A FAD sing 101 n n 
PA O5B FAD sing 102 n n 
PA O3P FAD sing 103 n n 
O2A HOA2 FAD sing 104 n n 
O5B C5B FAD sing 105 n n 
C5B C4B FAD sing 106 n n 
C5B H51A FAD sing 107 n n 
C5B H52A FAD sing 108 n n 
C4B O4B FAD sing 109 n n 
C4B C3B FAD sing 110 n n 
C4B H4B FAD sing 111 n n 
O4B C1B FAD sing 112 n n 
C3B O3B FAD sing 113 n n 
C3B C2B FAD sing 114 n n 
C3B H3B FAD sing 115 n n 
O3B HO3A FAD sing 116 n n 
C2B O2B FAD sing 117 n n 
C2B C1B FAD sing 118 n n 
C2B H2B FAD sing 119 n n 
O2B HO2A FAD sing 120 n n 
C1B N9A FAD sing 121 n n 
C1B H1B FAD sing 122 n n 
N9A C8A FAD sing 123 n y 
N9A C4A FAD sing 124 n y 
C8A N7A FAD doub 125 n y 
C8A H8A FAD sing 126 n n 
N7A C5A FAD sing 127 n y 
C5A C6A FAD sing 128 n y 
C5A C4A FAD doub 129 n y 
C6A N6A FAD sing 130 n n 
C6A N1A FAD doub 131 n y 
N6A H61A FAD sing 132 n n 
N6A H62A FAD sing 133 n n 
N1A C2A FAD sing 134 n y 
C2A N3A FAD doub 135 n y 
C2A H2A FAD sing 136 n n 
N3A C4A FAD sing 137 n y 
N1 C2 FAD sing 138 n n 
N1 C10 FAD doub 139 n n 
C2 O2 FAD doub 140 n n 
C2 N3 FAD sing 141 n n 
N3 C4 FAD sing 142 n n 
N3 HN3 FAD sing 143 n n 
C4 O4 FAD doub 144 n n 
C4 C4X FAD sing 145 n n 
C4X N5 FAD doub 146 n n 
C4X C10 FAD sing 147 n n 
N5 C5X FAD sing 148 n n 
C5X C6 FAD doub 149 n y 
C5X C9A FAD sing 150 n y 
C6 C7 FAD sing 151 n y 
C6 H6 FAD sing 152 n n 
C7 C7M FAD sing 153 n n 
C7 C8 FAD doub 154 n y 
C7M HM71 FAD sing 155 n n 
C7M HM72 FAD sing 156 n n 
C7M HM73 FAD sing 157 n n 
C8 C8M FAD sing 158 n n 
C8 C9 FAD sing 159 n y 
C8M HM81 FAD sing 160 n n 
C8M HM82 FAD sing 161 n n 
C8M HM83 FAD sing 162 n n 
C9 C9A FAD doub 163 n y 
C9 H9 FAD sing 164 n n 
C9A N10 FAD sing 165 n n 
N10 C10 FAD sing 166 n n 
N10 C1' FAD sing 167 n n 
C1' C2' FAD sing 168 n n 
C1' "H1'1" FAD sing 169 n n 
C1' "H1'2" FAD sing 170 n n 
C2' O2' FAD sing 171 n n 
C2' C3' FAD sing 172 n n 
C2' H2' FAD sing 173 n n 
O2' HO2' FAD sing 174 n n 
C3' O3' FAD sing 175 n n 
C3' C4' FAD sing 176 n n 
C3' H3' FAD sing 177 n n 
O3' HO3' FAD sing 178 n n 
C4' O4' FAD sing 179 n n 
C4' C5' FAD sing 180 n n 
C4' H4' FAD sing 181 n n 
O4' HO4' FAD sing 182 n n 
C5' O5' FAD sing 183 n n 
C5' "H5'1" FAD sing 184 n n 
C5' "H5'2" FAD sing 185 n n 
O5' P FAD sing 186 n n 
P O1P FAD doub 187 n n 
P O2P FAD sing 188 n n 
P O3P FAD sing 189 n n 
O2P HOP2 FAD sing 190 n n 
#
_atom_sites.entry_id                     4I59 
_atom_sites.fract_transf_matrix[1][1]    0.011558 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007171 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005643 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 501 489 FAD FAD . 
F 3 CYH A 1 502 500 CYH CYH . 
G 2 FAD B 1 501 489 FAD FAD . 
H 3 CYH B 1 502 500 CYH CYH . 
I 2 FAD C 1 501 489 FAD FAD . 
J 3 CYH C 1 502 500 CYH CYH . 
K 2 FAD D 1 501 489 FAD FAD . 
L 3 CYH D 1 502 500 CYH CYH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . K 2 18.097 196.564 210.541 1 15.06 ? PA FAD 501 D 1 
HETATM 2 O O1A FAD . . . K 2 19.441 195.989 210.414 1 16.33 ? O1A FAD 501 D 1 
HETATM 3 O O2A FAD . . . K 2 17.867 197.846 211.256 1 16.12 ? O2A FAD 501 D 1 
HETATM 4 O O5B FAD . . . K 2 17.104 195.441 211.191 1 18.92 ? O5B FAD 501 D 1 
HETATM 5 C C5B FAD . . . K 2 17.075 194.075 210.742 1 15.63 ? C5B FAD 501 D 1 
HETATM 6 C C4B FAD . . . K 2 16.451 193.24 211.873 1 18.4 ? C4B FAD 501 D 1 
HETATM 7 O O4B FAD . . . K 2 16.549 191.845 211.526 1 21.32 ? O4B FAD 501 D 1 
HETATM 8 C C3B FAD . . . K 2 17.144 193.388 213.21 1 18.02 ? C3B FAD 501 D 1 
HETATM 9 O O3B FAD . . . K 2 16.254 193.741 214.228 1 21.88 ? O3B FAD 501 D 1 
HETATM 10 C C2B FAD . . . K 2 17.816 192.056 213.402 1 17.53 ? C2B FAD 501 D 1 
HETATM 11 O O2B FAD . . . K 2 18.115 191.712 214.729 1 16.71 ? O2B FAD 501 D 1 
HETATM 12 C C1B FAD . . . K 2 16.861 191.102 212.683 1 17.58 ? C1B FAD 501 D 1 
HETATM 13 N N9A FAD . . . K 2 17.458 189.802 212.256 1 22.89 ? N9A FAD 501 D 1 
HETATM 14 C C8A FAD . . . K 2 18.721 189.589 211.736 1 22.92 ? C8A FAD 501 D 1 
HETATM 15 N N7A FAD . . . K 2 18.953 188.286 211.46 1 25.46 ? N7A FAD 501 D 1 
HETATM 16 C C5A FAD . . . K 2 17.788 187.631 211.817 1 26 ? C5A FAD 501 D 1 
HETATM 17 C C6A FAD . . . K 2 17.392 186.25 211.776 1 27.98 ? C6A FAD 501 D 1 
HETATM 18 N N6A FAD . . . K 2 18.155 185.253 211.345 1 27.29 ? N6A FAD 501 D 1 
HETATM 19 N N1A FAD . . . K 2 16.126 185.934 212.214 1 28.55 ? N1A FAD 501 D 1 
HETATM 20 C C2A FAD . . . K 2 15.297 186.924 212.672 1 26.74 ? C2A FAD 501 D 1 
HETATM 21 N N3A FAD . . . K 2 15.605 188.254 212.744 1 25.83 ? N3A FAD 501 D 1 
HETATM 22 C C4A FAD . . . K 2 16.854 188.562 212.308 1 24.27 ? C4A FAD 501 D 1 
HETATM 23 N N1 FAD . . . K 2 20.35 205.887 208.964 1 14.89 ? N1 FAD 501 D 1 
HETATM 24 C C2 FAD . . . K 2 19.733 207.085 208.812 1 12.85 ? C2 FAD 501 D 1 
HETATM 25 O O2 FAD . . . K 2 18.772 207.212 208.067 1 20.53 ? O2 FAD 501 D 1 
HETATM 26 N N3 FAD . . . K 2 20.22 208.168 209.538 1 16.07 ? N3 FAD 501 D 1 
HETATM 27 C C4 FAD . . . K 2 21.29 208.117 210.398 1 18.46 ? C4 FAD 501 D 1 
HETATM 28 O O4 FAD . . . K 2 21.643 209.145 211.021 1 24.66 ? O4 FAD 501 D 1 
HETATM 29 C C4X FAD . . . K 2 21.921 206.86 210.556 1 16.77 ? C4X FAD 501 D 1 
HETATM 30 N N5 FAD . . . K 2 22.996 206.689 211.437 1 17.17 ? N5 FAD 501 D 1 
HETATM 31 C C5X FAD . . . K 2 23.543 205.445 211.642 1 12.67 ? C5X FAD 501 D 1 
HETATM 32 C C6 FAD . . . K 2 24.56 205.274 212.568 1 18.85 ? C6 FAD 501 D 1 
HETATM 33 C C7 FAD . . . K 2 25.113 204.012 212.865 1 20.36 ? C7 FAD 501 D 1 
HETATM 34 C C7M FAD . . . K 2 26.193 203.897 213.899 1 15.23 ? C7M FAD 501 D 1 
HETATM 35 C C8 FAD . . . K 2 24.61 202.874 212.171 1 21.79 ? C8 FAD 501 D 1 
HETATM 36 C C8M FAD . . . K 2 25.138 201.49 212.453 1 22.1 ? C8M FAD 501 D 1 
HETATM 37 C C9 FAD . . . K 2 23.589 203.029 211.201 1 19 ? C9 FAD 501 D 1 
HETATM 38 C C9A FAD . . . K 2 23.031 204.317 210.923 1 15.29 ? C9A FAD 501 D 1 
HETATM 39 N N10 FAD . . . K 2 21.973 204.51 209.989 1 14.1 ? N10 FAD 501 D 1 
HETATM 40 C C10 FAD . . . K 2 21.412 205.773 209.818 1 12.88 ? C10 FAD 501 D 1 
HETATM 41 C C1' FAD . . . K 2 21.418 203.366 209.199 1 10.63 ? C1' FAD 501 D 1 
HETATM 42 C C2' FAD . . . K 2 20.045 202.926 209.619 1 12.62 ? C2' FAD 501 D 1 
HETATM 43 O O2' FAD . . . K 2 20.077 202.665 210.999 1 15.48 ? O2' FAD 501 D 1 
HETATM 44 C C3' FAD . . . K 2 19.701 201.683 208.811 1 11.83 ? C3' FAD 501 D 1 
HETATM 45 O O3' FAD . . . K 2 19.664 201.982 207.421 1 13.73 ? O3' FAD 501 D 1 
HETATM 46 C C4' FAD . . . K 2 18.35 201.072 209.095 1 10.96 ? C4' FAD 501 D 1 
HETATM 47 O O4' FAD . . . K 2 18.105 200.96 210.491 1 18.87 ? O4' FAD 501 D 1 
HETATM 48 C C5' FAD . . . K 2 18.273 199.715 208.451 1 12.6 ? C5' FAD 501 D 1 
HETATM 49 O O5' FAD . . . K 2 16.987 199.212 208.809 1 15.55 ? O5' FAD 501 D 1 
HETATM 50 P P FAD . . . K 2 16.522 197.78 208.435 1 14.38 ? P FAD 501 D 1 
HETATM 51 O O1P FAD . . . K 2 15.164 197.608 208.999 1 11.4 ? O1P FAD 501 D 1 
HETATM 52 O O2P FAD . . . K 2 16.628 197.547 206.954 1 18.77 ? O2P FAD 501 D 1 
HETATM 53 O O3P FAD . . . K 2 17.616 196.821 209.054 1 19.45 ? O3P FAD 501 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#