data_4I59 # _model_server_result.job_id neMXo6P9lm01UbC99Y5h-w _model_server_result.datetime_utc '2024-10-28 02:41:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i59 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":502}' # _entry.id 4I59 # _exptl.entry_id 4I59 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 98.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CYCLOHEXANONE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4I59 _cell.length_a 86.518 _cell.length_b 139.457 _cell.length_c 177.206 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I59 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F 1 1 B,G,H 2 1 C,I,J 3 1 D,K,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C6 H10 O' _chem_comp.formula_weight 98.143 _chem_comp.id CYH _chem_comp.mon_nstd_flag . _chem_comp.name CYCLOHEXANONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CYH doub 70 n n C1 C2 CYH sing 71 n n C1 C6 CYH sing 72 n n C2 C3 CYH sing 73 n n C2 H21 CYH sing 74 n n C2 H22 CYH sing 75 n n C3 C4 CYH sing 76 n n C3 H31 CYH sing 77 n n C3 H32 CYH sing 78 n n C4 C5 CYH sing 79 n n C4 H41 CYH sing 80 n n C4 H42 CYH sing 81 n n C5 C6 CYH sing 82 n n C5 H51 CYH sing 83 n n C5 H52 CYH sing 84 n n C6 H61 CYH sing 85 n n C6 H62 CYH sing 86 n n # _atom_sites.entry_id 4I59 _atom_sites.fract_transf_matrix[1][1] 0.011558 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007171 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005643 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 501 489 FAD FAD . F 3 CYH A 1 502 500 CYH CYH . G 2 FAD B 1 501 489 FAD FAD . H 3 CYH B 1 502 500 CYH CYH . I 2 FAD C 1 501 489 FAD FAD . J 3 CYH C 1 502 500 CYH CYH . K 2 FAD D 1 501 489 FAD FAD . L 3 CYH D 1 502 500 CYH CYH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CYH . . . J 3 40.663 217.987 159.725 1 52.33 ? C1 CYH 502 C 1 HETATM 2 O O1 CYH . . . J 3 40.975 219.086 160.219 1 54.27 ? O1 CYH 502 C 1 HETATM 3 C C2 CYH . . . J 3 40.047 217.872 158.343 1 48.99 ? C2 CYH 502 C 1 HETATM 4 C C3 CYH . . . J 3 38.755 217.021 158.383 1 48.6 ? C3 CYH 502 C 1 HETATM 5 C C4 CYH . . . J 3 38.839 215.727 159.246 1 45.6 ? C4 CYH 502 C 1 HETATM 6 C C5 CYH . . . J 3 39.5 215.963 160.607 1 45.56 ? C5 CYH 502 C 1 HETATM 7 C C6 CYH . . . J 3 40.847 216.675 160.478 1 47.95 ? C6 CYH 502 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #