data_4I6M
#
_model_server_result.job_id            Wg7l-gfoQENy1_dB1by3sg 
_model_server_result.datetime_utc      '2024-12-27 00:19:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4i6m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":502}' 
#
_entry.id    4I6M 
#
_exptl.entry_id    4I6M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.78 
_cell.angle_gamma         90 
_cell.entry_id            4I6M 
_cell.length_a            227.374 
_cell.length_b            104.138 
_cell.length_c            81.319 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4I6M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 M N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASN 53 A ASN 53 1_555 A N MSE 54 A MSE 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 A C MSE 54 A MSE 54 1_555 A N ILE 55 A ILE 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 A C GLU 84 A GLU 84 1_555 A N MSE 85 A MSE 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale4 A C MSE 85 A MSE 85 1_555 A N GLN 86 A GLN 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale5 A C THR 107 A THR 107 1_555 A N MSE 108 A MSE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale6 A C MSE 108 A MSE 108 1_555 A N PRO 109 A PRO 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale7 A C ASP 116 A ASP 116 1_555 A N MSE 117 A MSE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale8 A C MSE 117 A MSE 117 1_555 A N ALA 118 A ALA 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale9 A C SER 148 A SER 148 1_555 A N MSE 149 A MSE 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale10 A C MSE 149 A MSE 149 1_555 A N GLY 150 A GLY 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale11 A C THR 234 A THR 234 1_555 A N MSE 235 A MSE 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale12 A C MSE 235 A MSE 235 1_555 A N LEU 236 A LEU 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale13 A C LEU 332 A LEU 332 1_555 A N MSE 333 A MSE 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale14 A C MSE 333 A MSE 333 1_555 A N ALA 334 A ALA 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale15 A C GLY 403 A GLY 403 1_555 A N MSE 404 A MSE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale16 A C MSE 404 A MSE 404 1_555 A N GLU 405 A GLU 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale17 A C VAL 428 A VAL 428 1_555 A N MSE 429 A MSE 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale18 A C MSE 429 A MSE 429 1_555 A N MSE 430 A MSE 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale19 A C MSE 430 A MSE 430 1_555 A N ASP 431 A ASP 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale20 A C THR 442 A THR 442 1_555 A N MSE 443 A MSE 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale21 A C MSE 443 A MSE 443 1_555 A N ALA 444 A ALA 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale22 B C SER 152 B SER 152 1_555 B N MSE 153 B MSE 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale23 B C MSE 153 B MSE 153 1_555 B N ILE 154 B ILE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale24 B C PRO 188 B PRO 188 1_555 B N MSE 189 B MSE 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale25 B C MSE 189 B MSE 189 1_555 B N GLY 190 B GLY 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale26 B C ASN 427 B ASN 455 1_555 B N MSE 428 B MSE 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale27 B C MSE 428 B MSE 456 1_555 B N LYS 429 B LYS 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale28 C C SER 46 C SER 607 1_555 C N MSE 47 C MSE 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale29 C C MSE 47 C MSE 608 1_555 C N ASN 48 C ASN 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale30 D C MSE 1 D MSE 1 1_555 D N ASP 2 D ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     4I6M 
_atom_sites.fract_transf_matrix[1][1]    0.004398 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00029 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009603 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012324 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 PO4 A 1 501 2 PO4 PO4 . 
F 5 PO4 A 1 502 3 PO4 PO4 . 
G 5 PO4 A 1 503 4 PO4 PO4 . 
H 5 PO4 A 1 504 6 PO4 PO4 . 
I 5 PO4 A 1 505 7 PO4 PO4 . 
J 5 PO4 A 1 506 8 PO4 PO4 . 
K 5 PO4 B 1 501 1 PO4 PO4 . 
L 5 PO4 B 1 502 5 PO4 PO4 . 
M 5 PO4 B 1 503 9 PO4 PO4 . 
N 5 PO4 B 1 504 10 PO4 PO4 . 
O 5 PO4 B 1 505 11 PO4 PO4 . 
P 5 PO4 B 1 506 12 PO4 PO4 . 
Q 6 HOH A 1 601 4 HOH HOH . 
Q 6 HOH A 2 602 7 HOH HOH . 
Q 6 HOH A 3 603 12 HOH HOH . 
Q 6 HOH A 4 604 21 HOH HOH . 
Q 6 HOH A 5 605 23 HOH HOH . 
Q 6 HOH A 6 606 26 HOH HOH . 
Q 6 HOH A 7 607 30 HOH HOH . 
Q 6 HOH A 8 608 34 HOH HOH . 
Q 6 HOH A 9 609 42 HOH HOH . 
Q 6 HOH A 10 610 56 HOH HOH . 
Q 6 HOH A 11 611 58 HOH HOH . 
Q 6 HOH A 12 612 63 HOH HOH . 
Q 6 HOH A 13 613 67 HOH HOH . 
Q 6 HOH A 14 614 69 HOH HOH . 
Q 6 HOH A 15 615 70 HOH HOH . 
Q 6 HOH A 16 616 75 HOH HOH . 
Q 6 HOH A 17 617 77 HOH HOH . 
Q 6 HOH A 18 618 78 HOH HOH . 
Q 6 HOH A 19 619 106 HOH HOH . 
Q 6 HOH A 20 620 116 HOH HOH . 
Q 6 HOH A 21 621 122 HOH HOH . 
Q 6 HOH A 22 622 125 HOH HOH . 
Q 6 HOH A 23 623 126 HOH HOH . 
Q 6 HOH A 24 624 127 HOH HOH . 
Q 6 HOH A 25 625 133 HOH HOH . 
Q 6 HOH A 26 626 138 HOH HOH . 
Q 6 HOH A 27 627 142 HOH HOH . 
Q 6 HOH A 28 628 152 HOH HOH . 
Q 6 HOH A 29 629 154 HOH HOH . 
Q 6 HOH A 30 630 155 HOH HOH . 
Q 6 HOH A 31 631 160 HOH HOH . 
Q 6 HOH A 32 632 161 HOH HOH . 
Q 6 HOH A 33 633 167 HOH HOH . 
R 6 HOH B 1 601 2 HOH HOH . 
R 6 HOH B 2 602 3 HOH HOH . 
R 6 HOH B 3 603 8 HOH HOH . 
R 6 HOH B 4 604 9 HOH HOH . 
R 6 HOH B 5 605 11 HOH HOH . 
R 6 HOH B 6 606 17 HOH HOH . 
R 6 HOH B 7 607 22 HOH HOH . 
R 6 HOH B 8 608 24 HOH HOH . 
R 6 HOH B 9 609 25 HOH HOH . 
R 6 HOH B 10 610 31 HOH HOH . 
R 6 HOH B 11 611 38 HOH HOH . 
R 6 HOH B 12 612 41 HOH HOH . 
R 6 HOH B 13 613 44 HOH HOH . 
R 6 HOH B 14 614 45 HOH HOH . 
R 6 HOH B 15 615 53 HOH HOH . 
R 6 HOH B 16 616 64 HOH HOH . 
R 6 HOH B 17 617 68 HOH HOH . 
R 6 HOH B 18 618 71 HOH HOH . 
R 6 HOH B 19 619 72 HOH HOH . 
R 6 HOH B 20 620 86 HOH HOH . 
R 6 HOH B 21 621 94 HOH HOH . 
R 6 HOH B 22 622 97 HOH HOH . 
R 6 HOH B 23 623 98 HOH HOH . 
R 6 HOH B 24 624 102 HOH HOH . 
R 6 HOH B 25 625 103 HOH HOH . 
R 6 HOH B 26 626 104 HOH HOH . 
R 6 HOH B 27 627 110 HOH HOH . 
R 6 HOH B 28 628 115 HOH HOH . 
R 6 HOH B 29 629 117 HOH HOH . 
R 6 HOH B 30 630 118 HOH HOH . 
R 6 HOH B 31 631 120 HOH HOH . 
R 6 HOH B 32 632 121 HOH HOH . 
R 6 HOH B 33 633 128 HOH HOH . 
R 6 HOH B 34 634 131 HOH HOH . 
R 6 HOH B 35 635 134 HOH HOH . 
R 6 HOH B 36 636 137 HOH HOH . 
R 6 HOH B 37 637 139 HOH HOH . 
R 6 HOH B 38 638 140 HOH HOH . 
R 6 HOH B 39 639 143 HOH HOH . 
R 6 HOH B 40 640 145 HOH HOH . 
R 6 HOH B 41 641 148 HOH HOH . 
R 6 HOH B 42 642 149 HOH HOH . 
R 6 HOH B 43 643 150 HOH HOH . 
R 6 HOH B 44 644 151 HOH HOH . 
R 6 HOH B 45 645 153 HOH HOH . 
R 6 HOH B 46 646 158 HOH HOH . 
R 6 HOH B 47 647 159 HOH HOH . 
R 6 HOH B 48 648 162 HOH HOH . 
R 6 HOH B 49 649 163 HOH HOH . 
R 6 HOH B 50 650 164 HOH HOH . 
R 6 HOH B 51 651 165 HOH HOH . 
S 6 HOH C 1 701 27 HOH HOH . 
S 6 HOH C 2 702 100 HOH HOH . 
S 6 HOH C 3 703 147 HOH HOH . 
S 6 HOH C 4 704 156 HOH HOH . 
S 6 HOH C 5 705 166 HOH HOH . 
T 6 HOH D 1 201 18 HOH HOH . 
T 6 HOH D 2 202 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . L 5 32.394 46.995 102.561 1 126.55 ? P PO4 502 B 1 
HETATM 2 O O1 PO4 . . . L 5 32.389 46.909 101.045 1 125.03 ? O1 PO4 502 B 1 
HETATM 3 O O2 PO4 . . . L 5 30.983 47.108 103.087 1 127.03 ? O2 PO4 502 B 1 
HETATM 4 O O3 PO4 . . . L 5 33.008 45.739 103.141 1 127.83 ? O3 PO4 502 B 1 
HETATM 5 O O4 PO4 . . . L 5 33.185 48.214 102.992 1 126.13 ? O4 PO4 502 B 1 
#
_model_server_stats.io_time_ms              81 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#