data_4I6Q
#
_model_server_result.job_id            ECHYxOzQTVLgmEsASuQHQw 
_model_server_result.datetime_utc      '2024-11-22 09:44:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4i6q 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1201}' 
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_entry.id    4I6Q 
#
_exptl.entry_id    4I6Q 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              136.151 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-phenylurea 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4I6Q 
_cell.length_a            46.874 
_cell.length_b            75.646 
_cell.length_c            89.27 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 4I6Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C7 H8 N2 O' 
_chem_comp.formula_weight    136.151 
_chem_comp.id                PHU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-phenylurea 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Phenylurea 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 PHU doub 305 n n 
C1 N2 PHU sing 306 n n 
C1 N1 PHU sing 307 n n 
C3 C2 PHU doub 308 n y 
N1 C2 PHU sing 309 n n 
C2 C4 PHU sing 310 n y 
C3 C6 PHU sing 311 n y 
C3 H3 PHU sing 312 n n 
C4 C5 PHU doub 313 n y 
C4 H4 PHU sing 314 n n 
C7 C5 PHU sing 315 n y 
C5 H5 PHU sing 316 n n 
C6 C7 PHU doub 317 n y 
C6 H6 PHU sing 318 n n 
C7 H7 PHU sing 319 n n 
N1 HN1 PHU sing 320 n n 
N2 HN2 PHU sing 321 n n 
N2 HN2A PHU sing 322 n n 
#
_atom_sites.entry_id                     4I6Q 
_atom_sites.fract_transf_matrix[1][1]    0.021334 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013219 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011202 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PHU A 1 1201 1 PHU 517 . 
C 3 1DT A 1 1202 1 1DT 282 . 
D 4 HOH A 1 1301 1001 HOH HOH . 
D 4 HOH A 2 1302 1002 HOH HOH . 
D 4 HOH A 3 1303 1003 HOH HOH . 
D 4 HOH A 4 1304 1005 HOH HOH . 
D 4 HOH A 5 1305 1006 HOH HOH . 
D 4 HOH A 6 1306 1007 HOH HOH . 
D 4 HOH A 7 1307 1008 HOH HOH . 
D 4 HOH A 8 1308 1010 HOH HOH . 
D 4 HOH A 9 1309 1011 HOH HOH . 
D 4 HOH A 10 1310 1012 HOH HOH . 
D 4 HOH A 11 1311 1013 HOH HOH . 
D 4 HOH A 12 1312 1014 HOH HOH . 
D 4 HOH A 13 1313 1015 HOH HOH . 
D 4 HOH A 14 1314 1016 HOH HOH . 
D 4 HOH A 15 1315 1017 HOH HOH . 
D 4 HOH A 16 1316 1019 HOH HOH . 
D 4 HOH A 17 1317 1020 HOH HOH . 
D 4 HOH A 18 1318 1021 HOH HOH . 
D 4 HOH A 19 1319 1023 HOH HOH . 
D 4 HOH A 20 1320 1024 HOH HOH . 
D 4 HOH A 21 1321 1025 HOH HOH . 
D 4 HOH A 22 1322 1027 HOH HOH . 
D 4 HOH A 23 1323 1028 HOH HOH . 
D 4 HOH A 24 1324 1030 HOH HOH . 
D 4 HOH A 25 1325 1031 HOH HOH . 
D 4 HOH A 26 1326 1032 HOH HOH . 
D 4 HOH A 27 1327 1033 HOH HOH . 
D 4 HOH A 28 1328 1036 HOH HOH . 
D 4 HOH A 29 1329 1037 HOH HOH . 
D 4 HOH A 30 1330 1038 HOH HOH . 
D 4 HOH A 31 1331 1039 HOH HOH . 
D 4 HOH A 32 1332 1040 HOH HOH . 
D 4 HOH A 33 1333 1041 HOH HOH . 
D 4 HOH A 34 1334 1043 HOH HOH . 
D 4 HOH A 35 1335 1044 HOH HOH . 
D 4 HOH A 36 1336 1045 HOH HOH . 
D 4 HOH A 37 1337 1046 HOH HOH . 
D 4 HOH A 38 1338 1050 HOH HOH . 
D 4 HOH A 39 1339 1051 HOH HOH . 
D 4 HOH A 40 1340 1052 HOH HOH . 
D 4 HOH A 41 1341 1053 HOH HOH . 
D 4 HOH A 42 1342 1057 HOH HOH . 
D 4 HOH A 43 1343 1060 HOH HOH . 
D 4 HOH A 44 1344 1063 HOH HOH . 
D 4 HOH A 45 1345 1064 HOH HOH . 
D 4 HOH A 46 1346 1066 HOH HOH . 
D 4 HOH A 47 1347 1067 HOH HOH . 
D 4 HOH A 48 1348 1070 HOH HOH . 
D 4 HOH A 49 1349 1071 HOH HOH . 
D 4 HOH A 50 1350 1073 HOH HOH . 
D 4 HOH A 51 1351 1074 HOH HOH . 
D 4 HOH A 52 1352 1075 HOH HOH . 
D 4 HOH A 53 1353 1081 HOH HOH . 
D 4 HOH A 54 1354 1088 HOH HOH . 
D 4 HOH A 55 1355 1105 HOH HOH . 
D 4 HOH A 56 1356 1119 HOH HOH . 
D 4 HOH A 57 1357 1121 HOH HOH . 
D 4 HOH A 58 1358 2059 HOH HOH . 
D 4 HOH A 59 1359 2063 HOH HOH . 
D 4 HOH A 60 1360 2064 HOH HOH . 
D 4 HOH A 61 1361 2066 HOH HOH . 
D 4 HOH A 62 1362 2067 HOH HOH . 
D 4 HOH A 63 1363 2069 HOH HOH . 
D 4 HOH A 64 1364 2070 HOH HOH . 
D 4 HOH A 65 1365 2071 HOH HOH . 
D 4 HOH A 66 1366 2072 HOH HOH . 
D 4 HOH A 67 1367 2074 HOH HOH . 
D 4 HOH A 68 1368 2077 HOH HOH . 
D 4 HOH A 69 1369 2079 HOH HOH . 
D 4 HOH A 70 1370 2082 HOH HOH . 
D 4 HOH A 71 1371 2084 HOH HOH . 
D 4 HOH A 72 1372 2085 HOH HOH . 
D 4 HOH A 73 1373 2087 HOH HOH . 
D 4 HOH A 74 1374 2091 HOH HOH . 
D 4 HOH A 75 1375 2092 HOH HOH . 
D 4 HOH A 76 1376 2093 HOH HOH . 
D 4 HOH A 77 1377 2096 HOH HOH . 
D 4 HOH A 78 1378 2107 HOH HOH . 
D 4 HOH A 79 1379 2108 HOH HOH . 
D 4 HOH A 80 1380 2113 HOH HOH . 
D 4 HOH A 81 1381 2120 HOH HOH . 
D 4 HOH A 82 1382 2123 HOH HOH . 
D 4 HOH A 83 1383 2130 HOH HOH . 
D 4 HOH A 84 1384 2133 HOH HOH . 
D 4 HOH A 85 1385 2135 HOH HOH . 
D 4 HOH A 86 1386 2137 HOH HOH . 
D 4 HOH A 87 1387 2138 HOH HOH . 
D 4 HOH A 88 1388 2139 HOH HOH . 
D 4 HOH A 89 1389 2141 HOH HOH . 
D 4 HOH A 90 1390 2142 HOH HOH . 
D 4 HOH A 91 1391 2146 HOH HOH . 
D 4 HOH A 92 1392 2147 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PHU . . . B 2 6.734 -22.563 -28.369 1 55.1 ? C1 PHU 1201 A 1 
HETATM 2 C C2 PHU . . . B 2 8.032 -24.546 -27.386 1 52.91 ? C2 PHU 1201 A 1 
HETATM 3 C C3 PHU . . . B 2 8.116 -25.039 -26.062 1 51.52 ? C3 PHU 1201 A 1 
HETATM 4 C C4 PHU . . . B 2 8.268 -25.432 -28.466 1 52.35 ? C4 PHU 1201 A 1 
HETATM 5 C C5 PHU . . . B 2 8.643 -26.75 -28.198 1 50.64 ? C5 PHU 1201 A 1 
HETATM 6 C C6 PHU . . . B 2 8.494 -26.359 -25.823 1 47.76 ? C6 PHU 1201 A 1 
HETATM 7 C C7 PHU . . . B 2 8.74 -27.196 -26.901 1 44.26 ? C7 PHU 1201 A 1 
HETATM 8 N N1 PHU . . . B 2 7.64 -23.183 -27.52 1 51.13 ? N1 PHU 1201 A 1 
HETATM 9 N N2 PHU . . . B 2 6.549 -21.244 -28.042 1 42.59 ? N2 PHU 1201 A 1 
HETATM 10 O O1 PHU . . . B 2 6.088 -23.071 -29.355 1 46.84 ? O1 PHU 1201 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
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