data_4I6R # _model_server_result.job_id YmK9oiVUHAL4WqQ40pjzRw _model_server_result.datetime_utc '2024-12-21 12:52:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i6r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":103}' # _entry.id 4I6R # _exptl.entry_id 4I6R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 110.47 _cell.angle_beta 105.6 _cell.angle_gamma 96 _cell.entry_id 4I6R _cell.length_a 34.76 _cell.length_b 34.78 _cell.length_c 41.86 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I6R _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L 1 1 A,C,D,E,F,K 2 1 B,G,H,I,J,L 2 2 A,C,D,E,F,K 3 1 B,G,H,I,J,L 3 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_566 x,y+1,z+1 1 0 0 0 1 0 0 0 1 -14.892484 18.686529 37.049107 3 'crystal symmetry operation' 1_666 x+1,y+1,z+1 1 0 0 0 1 0 0 0 1 19.867516 18.686529 37.049107 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 4I6R _atom_sites.fract_transf_matrix[1][1] 0.028769 _atom_sites.fract_transf_matrix[1][2] 0.003024 _atom_sites.fract_transf_matrix[1][3] 0.010039 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028911 _atom_sites.fract_transf_matrix[2][3] 0.01241 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 101 2 SO4 SO4 . D 3 GOL A 1 102 1 GOL GOL . E 3 GOL A 1 103 4 GOL GOL . F 3 GOL A 1 104 5 GOL GOL . G 2 SO4 B 1 101 1 SO4 SO4 . H 2 SO4 B 1 102 3 SO4 SO4 . I 3 GOL B 1 103 2 GOL GOL . J 3 GOL B 1 104 3 GOL GOL . K 4 HOH A 1 201 3 HOH HOH . K 4 HOH A 2 202 5 HOH HOH . K 4 HOH A 3 203 8 HOH HOH . K 4 HOH A 4 204 9 HOH HOH . K 4 HOH A 5 205 10 HOH HOH . K 4 HOH A 6 206 11 HOH HOH . K 4 HOH A 7 207 12 HOH HOH . K 4 HOH A 8 208 13 HOH HOH . K 4 HOH A 9 209 15 HOH HOH . K 4 HOH A 10 210 18 HOH HOH . K 4 HOH A 11 211 22 HOH HOH . K 4 HOH A 12 212 23 HOH HOH . K 4 HOH A 13 213 24 HOH HOH . K 4 HOH A 14 214 25 HOH HOH . K 4 HOH A 15 215 28 HOH HOH . K 4 HOH A 16 216 29 HOH HOH . K 4 HOH A 17 217 30 HOH HOH . K 4 HOH A 18 218 35 HOH HOH . K 4 HOH A 19 219 37 HOH HOH . K 4 HOH A 20 220 40 HOH HOH . K 4 HOH A 21 221 42 HOH HOH . K 4 HOH A 22 222 45 HOH HOH . K 4 HOH A 23 223 46 HOH HOH . K 4 HOH A 24 224 47 HOH HOH . K 4 HOH A 25 225 49 HOH HOH . K 4 HOH A 26 226 51 HOH HOH . K 4 HOH A 27 227 54 HOH HOH . K 4 HOH A 28 228 55 HOH HOH . K 4 HOH A 29 229 57 HOH HOH . K 4 HOH A 30 230 59 HOH HOH . K 4 HOH A 31 231 62 HOH HOH . K 4 HOH A 32 232 65 HOH HOH . K 4 HOH A 33 233 67 HOH HOH . K 4 HOH A 34 234 69 HOH HOH . K 4 HOH A 35 235 70 HOH HOH . K 4 HOH A 36 236 71 HOH HOH . K 4 HOH A 37 237 73 HOH HOH . K 4 HOH A 38 238 74 HOH HOH . K 4 HOH A 39 239 75 HOH HOH . K 4 HOH A 40 240 76 HOH HOH . L 4 HOH B 1 201 1 HOH HOH . L 4 HOH B 2 202 2 HOH HOH . L 4 HOH B 3 203 4 HOH HOH . L 4 HOH B 4 204 6 HOH HOH . L 4 HOH B 5 205 7 HOH HOH . L 4 HOH B 6 206 14 HOH HOH . L 4 HOH B 7 207 16 HOH HOH . L 4 HOH B 8 208 17 HOH HOH . L 4 HOH B 9 209 19 HOH HOH . L 4 HOH B 10 210 20 HOH HOH . L 4 HOH B 11 211 21 HOH HOH . L 4 HOH B 12 212 26 HOH HOH . L 4 HOH B 13 213 27 HOH HOH . L 4 HOH B 14 214 31 HOH HOH . L 4 HOH B 15 215 32 HOH HOH . L 4 HOH B 16 216 33 HOH HOH . L 4 HOH B 17 217 34 HOH HOH . L 4 HOH B 18 218 36 HOH HOH . L 4 HOH B 19 219 39 HOH HOH . L 4 HOH B 20 220 41 HOH HOH . L 4 HOH B 21 221 43 HOH HOH . L 4 HOH B 22 222 44 HOH HOH . L 4 HOH B 23 223 48 HOH HOH . L 4 HOH B 24 224 50 HOH HOH . L 4 HOH B 25 225 52 HOH HOH . L 4 HOH B 26 226 53 HOH HOH . L 4 HOH B 27 227 56 HOH HOH . L 4 HOH B 28 228 58 HOH HOH . L 4 HOH B 29 229 60 HOH HOH . L 4 HOH B 30 230 61 HOH HOH . L 4 HOH B 31 231 63 HOH HOH . L 4 HOH B 32 232 64 HOH HOH . L 4 HOH B 33 233 66 HOH HOH . L 4 HOH B 34 234 68 HOH HOH . L 4 HOH B 35 235 72 HOH HOH . L 4 HOH B 36 236 77 HOH HOH . L 4 HOH B 37 237 78 HOH HOH . L 4 HOH B 38 238 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 12.75 -7.109 -11.424 1 50.12 ? C1 GOL 103 A 1 HETATM 2 O O1 GOL . . . E 3 11.951 -6.178 -10.682 1 42.81 ? O1 GOL 103 A 1 HETATM 3 C C2 GOL . . . E 3 12.045 -8.449 -11.62 1 47.61 ? C2 GOL 103 A 1 HETATM 4 O O2 GOL . . . E 3 12.294 -9.362 -10.534 1 64.91 ? O2 GOL 103 A 1 HETATM 5 C C3 GOL . . . E 3 10.56 -8.25 -11.715 1 50.32 ? C3 GOL 103 A 1 HETATM 6 O O3 GOL . . . E 3 10.085 -8.971 -12.858 1 47.25 ? O3 GOL 103 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #