data_4I6T # _model_server_result.job_id zvNczeeISWY50dPIBTc3Ow _model_server_result.datetime_utc '2025-07-05 01:54:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i6t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4I6T # _exptl.entry_id 4I6T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 102.046 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MALONATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4I6T _cell.length_a 65.449 _cell.length_b 65.449 _cell.length_c 72.29 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I6T _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H2 O4 -2' _chem_comp.formula_weight 102.046 _chem_comp.id MLI _chem_comp.mon_nstd_flag . _chem_comp.name 'MALONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MLI sing 224 n n C1 C3 MLI sing 225 n n C1 H11 MLI sing 226 n n C1 H12 MLI sing 227 n n C2 O6 MLI doub 228 n n C2 O7 MLI sing 229 n n C3 O8 MLI doub 230 n n C3 O9 MLI sing 231 n n # _atom_sites.entry_id 4I6T _atom_sites.fract_transf_matrix[1][1] 0.015279 _atom_sites.fract_transf_matrix[1][2] 0.008821 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013833 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MLI A 1 101 1 MLI MLI . D 3 HOH A 1 201 1 HOH HOH . D 3 HOH A 2 202 2 HOH HOH . D 3 HOH A 3 203 3 HOH HOH . D 3 HOH A 4 204 4 HOH HOH . D 3 HOH A 5 205 5 HOH HOH . D 3 HOH A 6 206 6 HOH HOH . D 3 HOH A 7 207 7 HOH HOH . D 3 HOH A 8 208 9 HOH HOH . D 3 HOH A 9 209 11 HOH HOH . D 3 HOH A 10 210 12 HOH HOH . D 3 HOH A 11 211 13 HOH HOH . D 3 HOH A 12 212 14 HOH HOH . D 3 HOH A 13 213 15 HOH HOH . D 3 HOH A 14 214 16 HOH HOH . D 3 HOH A 15 215 17 HOH HOH . D 3 HOH A 16 216 20 HOH HOH . D 3 HOH A 17 217 21 HOH HOH . D 3 HOH A 18 218 23 HOH HOH . D 3 HOH A 19 219 27 HOH HOH . D 3 HOH A 20 220 28 HOH HOH . D 3 HOH A 21 221 30 HOH HOH . D 3 HOH A 22 222 31 HOH HOH . D 3 HOH A 23 223 32 HOH HOH . D 3 HOH A 24 224 35 HOH HOH . D 3 HOH A 25 225 41 HOH HOH . D 3 HOH A 26 226 42 HOH HOH . D 3 HOH A 27 227 45 HOH HOH . D 3 HOH A 28 228 48 HOH HOH . D 3 HOH A 29 229 49 HOH HOH . D 3 HOH A 30 230 52 HOH HOH . D 3 HOH A 31 231 53 HOH HOH . D 3 HOH A 32 232 56 HOH HOH . D 3 HOH A 33 233 58 HOH HOH . D 3 HOH A 34 234 59 HOH HOH . D 3 HOH A 35 235 60 HOH HOH . D 3 HOH A 36 236 61 HOH HOH . D 3 HOH A 37 237 62 HOH HOH . D 3 HOH A 38 238 67 HOH HOH . D 3 HOH A 39 239 74 HOH HOH . D 3 HOH A 40 240 78 HOH HOH . D 3 HOH A 41 241 81 HOH HOH . D 3 HOH A 42 242 82 HOH HOH . D 3 HOH A 43 243 83 HOH HOH . D 3 HOH A 44 244 85 HOH HOH . D 3 HOH A 45 245 86 HOH HOH . D 3 HOH A 46 246 87 HOH HOH . E 3 HOH B 1 101 84 HOH HOH . E 3 HOH B 2 102 8 HOH HOH . E 3 HOH B 3 103 10 HOH HOH . E 3 HOH B 4 104 18 HOH HOH . E 3 HOH B 5 105 19 HOH HOH . E 3 HOH B 6 106 22 HOH HOH . E 3 HOH B 7 107 24 HOH HOH . E 3 HOH B 8 108 25 HOH HOH . E 3 HOH B 9 109 26 HOH HOH . E 3 HOH B 10 110 29 HOH HOH . E 3 HOH B 11 111 33 HOH HOH . E 3 HOH B 12 112 34 HOH HOH . E 3 HOH B 13 113 36 HOH HOH . E 3 HOH B 14 114 37 HOH HOH . E 3 HOH B 15 115 38 HOH HOH . E 3 HOH B 16 116 39 HOH HOH . E 3 HOH B 17 117 40 HOH HOH . E 3 HOH B 18 118 43 HOH HOH . E 3 HOH B 19 119 44 HOH HOH . E 3 HOH B 20 120 46 HOH HOH . E 3 HOH B 21 121 47 HOH HOH . E 3 HOH B 22 122 50 HOH HOH . E 3 HOH B 23 123 51 HOH HOH . E 3 HOH B 24 124 54 HOH HOH . E 3 HOH B 25 125 55 HOH HOH . E 3 HOH B 26 126 57 HOH HOH . E 3 HOH B 27 127 63 HOH HOH . E 3 HOH B 28 128 64 HOH HOH . E 3 HOH B 29 129 65 HOH HOH . E 3 HOH B 30 130 66 HOH HOH . E 3 HOH B 31 131 68 HOH HOH . E 3 HOH B 32 132 69 HOH HOH . E 3 HOH B 33 133 70 HOH HOH . E 3 HOH B 34 134 72 HOH HOH . E 3 HOH B 35 135 73 HOH HOH . E 3 HOH B 36 136 75 HOH HOH . E 3 HOH B 37 137 76 HOH HOH . E 3 HOH B 38 138 77 HOH HOH . E 3 HOH B 39 139 79 HOH HOH . E 3 HOH B 40 140 80 HOH HOH . E 3 HOH B 41 141 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLI . . . C 2 -35.465 29.477 -11.59 1 54.79 ? C1 MLI 101 A 1 HETATM 2 C C2 MLI . . . C 2 -35.383 30.066 -12.981 1 56.34 ? C2 MLI 101 A 1 HETATM 3 C C3 MLI . . . C 2 -35.619 27.969 -11.534 1 56.6 ? C3 MLI 101 A 1 HETATM 4 O O6 MLI . . . C 2 -36.199 30.96 -13.267 1 56.26 ? O6 MLI 101 A 1 HETATM 5 O O7 MLI . . . C 2 -34.53 29.647 -13.801 1 63.53 ? O7 MLI 101 A 1 HETATM 6 O O8 MLI . . . C 2 -36.516 27.379 -12.176 1 54.8 ? O8 MLI 101 A 1 HETATM 7 O O9 MLI . . . C 2 -34.829 27.346 -10.794 1 56.25 ? O9 MLI 101 A 1 # _model_server_stats.io_time_ms 553 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #