data_4I6U
#
_model_server_result.job_id            HRz5z5GWIu5NpP6BiTetQA 
_model_server_result.datetime_utc      '2024-11-22 17:32:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4i6u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":105}' 
#
_entry.id    4I6U 
#
_exptl.entry_id    4I6U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4I6U 
_cell.length_a            48.61 
_cell.length_b            81.85 
_cell.length_c            135.08 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4I6U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G,H,I,J,K,M,O,R 1 1 
B,C,L,P,Q 2 1 
E,F,N,S,T 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 K N N 
? 5 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 13 A SER 10 1_555 G NA NA . A NA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.09 ? 
metalc ? metalc2 A O ILE 44 A ILE 41 1_555 G NA NA . A NA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? 
metalc ? metalc3 A O ARG 49 A ARG 46 1_555 G NA NA . A NA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 122 n n 
C1 C2 GOL sing 123 n n 
C1 H11 GOL sing 124 n n 
C1 H12 GOL sing 125 n n 
O1 HO1 GOL sing 126 n n 
C2 O2 GOL sing 127 n n 
C2 C3 GOL sing 128 n n 
C2 H2 GOL sing 129 n n 
O2 HO2 GOL sing 130 n n 
C3 O3 GOL sing 131 n n 
C3 H31 GOL sing 132 n n 
C3 H32 GOL sing 133 n n 
O3 HO3 GOL sing 134 n n 
#
_atom_sites.entry_id                     4I6U 
_atom_sites.fract_transf_matrix[1][1]    0.020572 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012217 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007403 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 NA A 1 101 1 NA NA . 
H 3 ACT A 1 102 1 ACT ACT . 
I 4 PEG A 1 103 1 PEG PEG . 
J 4 PEG A 1 104 2 PEG PEG . 
K 5 GOL A 1 105 1 GOL GOL . 
L 3 ACT C 1 101 3 ACT ACT . 
M 3 ACT D 1 101 2 ACT ACT . 
N 5 GOL F 1 101 2 GOL GOL . 
O 6 HOH A 1 201 5 HOH HOH . 
O 6 HOH A 2 202 6 HOH HOH . 
O 6 HOH A 3 203 11 HOH HOH . 
O 6 HOH A 4 204 12 HOH HOH . 
O 6 HOH A 5 205 20 HOH HOH . 
O 6 HOH A 6 206 25 HOH HOH . 
O 6 HOH A 7 207 38 HOH HOH . 
O 6 HOH A 8 208 44 HOH HOH . 
O 6 HOH A 9 209 56 HOH HOH . 
O 6 HOH A 10 210 63 HOH HOH . 
O 6 HOH A 11 211 73 HOH HOH . 
O 6 HOH A 12 212 88 HOH HOH . 
O 6 HOH A 13 213 89 HOH HOH . 
O 6 HOH A 14 214 100 HOH HOH . 
O 6 HOH A 15 215 101 HOH HOH . 
O 6 HOH A 16 216 102 HOH HOH . 
O 6 HOH A 17 217 104 HOH HOH . 
O 6 HOH A 18 218 108 HOH HOH . 
O 6 HOH A 19 219 109 HOH HOH . 
O 6 HOH A 20 220 116 HOH HOH . 
O 6 HOH A 21 221 123 HOH HOH . 
O 6 HOH A 22 222 125 HOH HOH . 
O 6 HOH A 23 223 130 HOH HOH . 
O 6 HOH A 24 224 133 HOH HOH . 
O 6 HOH A 25 225 139 HOH HOH . 
O 6 HOH A 26 226 144 HOH HOH . 
O 6 HOH A 27 227 99 HOH HOH . 
P 6 HOH B 1 101 7 HOH HOH . 
P 6 HOH B 2 102 13 HOH HOH . 
P 6 HOH B 3 103 14 HOH HOH . 
P 6 HOH B 4 104 16 HOH HOH . 
P 6 HOH B 5 105 17 HOH HOH . 
P 6 HOH B 6 106 18 HOH HOH . 
P 6 HOH B 7 107 24 HOH HOH . 
P 6 HOH B 8 108 35 HOH HOH . 
P 6 HOH B 9 109 37 HOH HOH . 
P 6 HOH B 10 110 39 HOH HOH . 
P 6 HOH B 11 111 40 HOH HOH . 
P 6 HOH B 12 112 43 HOH HOH . 
P 6 HOH B 13 113 45 HOH HOH . 
P 6 HOH B 14 114 46 HOH HOH . 
P 6 HOH B 15 115 53 HOH HOH . 
P 6 HOH B 16 116 65 HOH HOH . 
P 6 HOH B 17 117 67 HOH HOH . 
P 6 HOH B 18 118 68 HOH HOH . 
P 6 HOH B 19 119 70 HOH HOH . 
P 6 HOH B 20 120 71 HOH HOH . 
P 6 HOH B 21 121 76 HOH HOH . 
P 6 HOH B 22 122 78 HOH HOH . 
P 6 HOH B 23 123 82 HOH HOH . 
P 6 HOH B 24 124 83 HOH HOH . 
P 6 HOH B 25 125 91 HOH HOH . 
P 6 HOH B 26 126 113 HOH HOH . 
P 6 HOH B 27 127 114 HOH HOH . 
P 6 HOH B 28 128 129 HOH HOH . 
P 6 HOH B 29 129 134 HOH HOH . 
P 6 HOH B 30 130 145 HOH HOH . 
P 6 HOH B 31 131 146 HOH HOH . 
P 6 HOH B 32 132 147 HOH HOH . 
Q 6 HOH C 1 201 1 HOH HOH . 
Q 6 HOH C 2 202 2 HOH HOH . 
Q 6 HOH C 3 203 3 HOH HOH . 
Q 6 HOH C 4 204 19 HOH HOH . 
Q 6 HOH C 5 205 23 HOH HOH . 
Q 6 HOH C 6 206 28 HOH HOH . 
Q 6 HOH C 7 207 29 HOH HOH . 
Q 6 HOH C 8 208 32 HOH HOH . 
Q 6 HOH C 9 209 47 HOH HOH . 
Q 6 HOH C 10 210 50 HOH HOH . 
Q 6 HOH C 11 211 51 HOH HOH . 
Q 6 HOH C 12 212 52 HOH HOH . 
Q 6 HOH C 13 213 60 HOH HOH . 
Q 6 HOH C 14 214 61 HOH HOH . 
Q 6 HOH C 15 215 75 HOH HOH . 
Q 6 HOH C 16 216 81 HOH HOH . 
Q 6 HOH C 17 217 84 HOH HOH . 
Q 6 HOH C 18 218 92 HOH HOH . 
Q 6 HOH C 19 219 93 HOH HOH . 
Q 6 HOH C 20 220 94 HOH HOH . 
Q 6 HOH C 21 221 96 HOH HOH . 
Q 6 HOH C 22 222 103 HOH HOH . 
Q 6 HOH C 23 223 117 HOH HOH . 
Q 6 HOH C 24 224 136 HOH HOH . 
Q 6 HOH C 25 225 143 HOH HOH . 
Q 6 HOH C 26 226 148 HOH HOH . 
R 6 HOH D 1 201 9 HOH HOH . 
R 6 HOH D 2 202 15 HOH HOH . 
R 6 HOH D 3 203 21 HOH HOH . 
R 6 HOH D 4 204 26 HOH HOH . 
R 6 HOH D 5 205 34 HOH HOH . 
R 6 HOH D 6 206 90 HOH HOH . 
R 6 HOH D 7 207 111 HOH HOH . 
R 6 HOH D 8 208 115 HOH HOH . 
R 6 HOH D 9 209 118 HOH HOH . 
R 6 HOH D 10 210 121 HOH HOH . 
R 6 HOH D 11 211 122 HOH HOH . 
R 6 HOH D 12 212 126 HOH HOH . 
R 6 HOH D 13 213 127 HOH HOH . 
R 6 HOH D 14 214 141 HOH HOH . 
R 6 HOH D 15 215 149 HOH HOH . 
R 6 HOH D 16 216 150 HOH HOH . 
R 6 HOH D 17 217 151 HOH HOH . 
R 6 HOH D 18 218 152 HOH HOH . 
R 6 HOH D 19 219 154 HOH HOH . 
R 6 HOH D 20 220 155 HOH HOH . 
S 6 HOH E 1 101 4 HOH HOH . 
S 6 HOH E 2 102 22 HOH HOH . 
S 6 HOH E 3 103 27 HOH HOH . 
S 6 HOH E 4 104 31 HOH HOH . 
S 6 HOH E 5 105 49 HOH HOH . 
S 6 HOH E 6 106 54 HOH HOH . 
S 6 HOH E 7 107 55 HOH HOH . 
S 6 HOH E 8 108 57 HOH HOH . 
S 6 HOH E 9 109 59 HOH HOH . 
S 6 HOH E 10 110 62 HOH HOH . 
S 6 HOH E 11 111 77 HOH HOH . 
S 6 HOH E 12 112 80 HOH HOH . 
S 6 HOH E 13 113 87 HOH HOH . 
S 6 HOH E 14 114 95 HOH HOH . 
S 6 HOH E 15 115 110 HOH HOH . 
S 6 HOH E 16 116 112 HOH HOH . 
S 6 HOH E 17 117 124 HOH HOH . 
S 6 HOH E 18 118 128 HOH HOH . 
S 6 HOH E 19 119 140 HOH HOH . 
T 6 HOH F 1 201 8 HOH HOH . 
T 6 HOH F 2 202 33 HOH HOH . 
T 6 HOH F 3 203 36 HOH HOH . 
T 6 HOH F 4 204 42 HOH HOH . 
T 6 HOH F 5 205 48 HOH HOH . 
T 6 HOH F 6 206 58 HOH HOH . 
T 6 HOH F 7 207 64 HOH HOH . 
T 6 HOH F 8 208 66 HOH HOH . 
T 6 HOH F 9 209 72 HOH HOH . 
T 6 HOH F 10 210 74 HOH HOH . 
T 6 HOH F 11 211 79 HOH HOH . 
T 6 HOH F 12 212 97 HOH HOH . 
T 6 HOH F 13 213 98 HOH HOH . 
T 6 HOH F 14 214 105 HOH HOH . 
T 6 HOH F 15 215 119 HOH HOH . 
T 6 HOH F 16 216 131 HOH HOH . 
T 6 HOH F 17 217 132 HOH HOH . 
T 6 HOH F 18 218 135 HOH HOH . 
T 6 HOH F 19 219 137 HOH HOH . 
T 6 HOH F 20 220 142 HOH HOH . 
T 6 HOH F 21 221 153 HOH HOH . 
T 6 HOH F 22 222 156 HOH HOH . 
T 6 HOH F 23 223 157 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 5 -4.106 20.449 -6.015 1 40.19 ? C1 GOL 105 A 1 
HETATM 2 O O1 GOL . . . K 5 -3.401 19.635 -6.974 1 41.66 ? O1 GOL 105 A 1 
HETATM 3 C C2 GOL . . . K 5 -3.4 21.79 -5.851 1 39.01 ? C2 GOL 105 A 1 
HETATM 4 O O2 GOL . . . K 5 -2.403 22.02 -6.852 1 34.49 ? O2 GOL 105 A 1 
HETATM 5 C C3 GOL . . . K 5 -4.45 22.856 -5.901 1 40.27 ? C3 GOL 105 A 1 
HETATM 6 O O3 GOL . . . K 5 -3.896 24.158 -5.736 1 44.65 ? O3 GOL 105 A 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#