data_4I8M # _model_server_result.job_id mhYH3aUfz0roLkfjqhjVRw _model_server_result.datetime_utc '2024-12-01 02:01:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i8m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4I8M # _exptl.entry_id 4I8M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4I8M _cell.length_a 169.267 _cell.length_b 169.267 _cell.length_c 305.599 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4I8M _atom_sites.fract_transf_matrix[1][1] 0.005908 _atom_sites.fract_transf_matrix[1][2] 0.003411 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006822 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003272 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 601 601 GOL GOL . C 3 HOH A 1 701 701 HOH HOH . C 3 HOH A 2 702 702 HOH HOH . C 3 HOH A 3 703 703 HOH HOH . C 3 HOH A 4 704 704 HOH HOH . C 3 HOH A 5 705 705 HOH HOH . C 3 HOH A 6 706 706 HOH HOH . C 3 HOH A 7 707 707 HOH HOH . C 3 HOH A 8 708 708 HOH HOH . C 3 HOH A 9 709 709 HOH HOH . C 3 HOH A 10 710 710 HOH HOH . C 3 HOH A 11 711 711 HOH HOH . C 3 HOH A 12 712 712 HOH HOH . C 3 HOH A 13 713 713 HOH HOH . C 3 HOH A 14 714 714 HOH HOH . C 3 HOH A 15 715 715 HOH HOH . C 3 HOH A 16 716 716 HOH HOH . C 3 HOH A 17 717 717 HOH HOH . C 3 HOH A 18 718 718 HOH HOH . C 3 HOH A 19 719 719 HOH HOH . C 3 HOH A 20 720 720 HOH HOH . C 3 HOH A 21 721 721 HOH HOH . C 3 HOH A 22 722 722 HOH HOH . C 3 HOH A 23 723 723 HOH HOH . C 3 HOH A 24 724 724 HOH HOH . C 3 HOH A 25 725 725 HOH HOH . C 3 HOH A 26 726 726 HOH HOH . C 3 HOH A 27 727 727 HOH HOH . C 3 HOH A 28 728 728 HOH HOH . C 3 HOH A 29 729 729 HOH HOH . C 3 HOH A 30 730 730 HOH HOH . C 3 HOH A 31 731 731 HOH HOH . C 3 HOH A 32 732 732 HOH HOH . C 3 HOH A 33 733 733 HOH HOH . C 3 HOH A 34 734 734 HOH HOH . C 3 HOH A 35 735 735 HOH HOH . C 3 HOH A 36 736 736 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -56.992 65.138 -7.625 1 107.76 ? C1 GOL 601 A 1 HETATM 2 O O1 GOL . . . B 2 -56.397 63.918 -8.006 1 107.73 ? O1 GOL 601 A 1 HETATM 3 C C2 GOL . . . B 2 -58.385 65.236 -8.235 1 107.78 ? C2 GOL 601 A 1 HETATM 4 O O2 GOL . . . B 2 -58.476 66.409 -9.011 1 107.78 ? O2 GOL 601 A 1 HETATM 5 C C3 GOL . . . B 2 -59.425 65.285 -7.122 1 107.82 ? C3 GOL 601 A 1 HETATM 6 O O3 GOL . . . B 2 -60.717 65.306 -7.687 1 107.86 ? O3 GOL 601 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #