data_4I8Q
#
_model_server_result.job_id            SzK-440Zd3Qn6fIW1qfnYA 
_model_server_result.datetime_utc      '2024-11-05 16:19:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4i8q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":609}' 
#
_entry.id    4I8Q 
#
_exptl.entry_id    4I8Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4I8Q 
_cell.length_a            98.04 
_cell.length_b            118.07 
_cell.length_c            128.21 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4I8Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        24 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_555 -x,-y+1/2,z -1 0 0 0 -1 0 0 0 1 0 59.035 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 I N N 
? 3 J N N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            O 
_struct_conn.ptnr1_label_comp_id            LEU 
_struct_conn.ptnr1_label_seq_id             202 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LEU 
_struct_conn.ptnr1_auth_seq_id              189 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            M 
_struct_conn.ptnr2_label_atom_id            NA 
_struct_conn.ptnr2_label_comp_id            NA 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             NA 
_struct_conn.ptnr2_auth_seq_id              612 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.262 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     4I8Q 
_atom_sites.fract_transf_matrix[1][1]    0.0102 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00847 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0078 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAD A 1 601 1 NAD NAD . 
C 3 EDO A 1 602 1 EDO EDO . 
D 3 EDO A 1 603 2 EDO EDO . 
E 3 EDO A 1 604 3 EDO EDO . 
F 3 EDO A 1 605 4 EDO EDO . 
G 3 EDO A 1 606 5 EDO EDO . 
H 4 PEG A 1 607 1 PEG PEG . 
I 3 EDO A 1 608 1 EDO EDO . 
J 3 EDO A 1 609 2 EDO EDO . 
K 4 PEG A 1 610 1 PEG PEG . 
L 4 PEG A 1 611 2 PEG PEG . 
M 5 NA A 1 612 1 NA NA . 
N 6 HOH A 1 701 1 HOH HOH . 
N 6 HOH A 2 702 2 HOH HOH . 
N 6 HOH A 3 703 3 HOH HOH . 
N 6 HOH A 4 704 4 HOH HOH . 
N 6 HOH A 5 705 5 HOH HOH . 
N 6 HOH A 6 706 6 HOH HOH . 
N 6 HOH A 7 707 7 HOH HOH . 
N 6 HOH A 8 708 8 HOH HOH . 
N 6 HOH A 9 709 9 HOH HOH . 
N 6 HOH A 10 710 10 HOH HOH . 
N 6 HOH A 11 711 11 HOH HOH . 
N 6 HOH A 12 712 12 HOH HOH . 
N 6 HOH A 13 713 13 HOH HOH . 
N 6 HOH A 14 714 14 HOH HOH . 
N 6 HOH A 15 715 15 HOH HOH . 
N 6 HOH A 16 716 16 HOH HOH . 
N 6 HOH A 17 717 17 HOH HOH . 
N 6 HOH A 18 718 18 HOH HOH . 
N 6 HOH A 19 719 20 HOH HOH . 
N 6 HOH A 20 720 21 HOH HOH . 
N 6 HOH A 21 722 24 HOH HOH . 
N 6 HOH A 22 723 25 HOH HOH . 
N 6 HOH A 23 724 26 HOH HOH . 
N 6 HOH A 24 725 27 HOH HOH . 
N 6 HOH A 25 726 28 HOH HOH . 
N 6 HOH A 26 727 29 HOH HOH . 
N 6 HOH A 27 728 32 HOH HOH . 
N 6 HOH A 28 729 33 HOH HOH . 
N 6 HOH A 29 730 34 HOH HOH . 
N 6 HOH A 30 731 35 HOH HOH . 
N 6 HOH A 31 732 36 HOH HOH . 
N 6 HOH A 32 733 37 HOH HOH . 
N 6 HOH A 33 734 38 HOH HOH . 
N 6 HOH A 34 735 39 HOH HOH . 
N 6 HOH A 35 736 40 HOH HOH . 
N 6 HOH A 36 737 41 HOH HOH . 
N 6 HOH A 37 738 42 HOH HOH . 
N 6 HOH A 38 739 43 HOH HOH . 
N 6 HOH A 39 740 44 HOH HOH . 
N 6 HOH A 40 741 45 HOH HOH . 
N 6 HOH A 41 742 46 HOH HOH . 
N 6 HOH A 42 743 47 HOH HOH . 
N 6 HOH A 43 744 48 HOH HOH . 
N 6 HOH A 44 745 49 HOH HOH . 
N 6 HOH A 45 746 50 HOH HOH . 
N 6 HOH A 46 747 51 HOH HOH . 
N 6 HOH A 47 748 52 HOH HOH . 
N 6 HOH A 48 749 53 HOH HOH . 
N 6 HOH A 49 750 54 HOH HOH . 
N 6 HOH A 50 751 55 HOH HOH . 
N 6 HOH A 51 752 56 HOH HOH . 
N 6 HOH A 52 753 57 HOH HOH . 
N 6 HOH A 53 754 58 HOH HOH . 
N 6 HOH A 54 755 59 HOH HOH . 
N 6 HOH A 55 756 60 HOH HOH . 
N 6 HOH A 56 757 61 HOH HOH . 
N 6 HOH A 57 758 62 HOH HOH . 
N 6 HOH A 58 759 63 HOH HOH . 
N 6 HOH A 59 760 64 HOH HOH . 
N 6 HOH A 60 761 65 HOH HOH . 
N 6 HOH A 61 762 66 HOH HOH . 
N 6 HOH A 62 763 67 HOH HOH . 
N 6 HOH A 63 764 68 HOH HOH . 
N 6 HOH A 64 765 69 HOH HOH . 
N 6 HOH A 65 766 70 HOH HOH . 
N 6 HOH A 66 767 71 HOH HOH . 
N 6 HOH A 67 768 72 HOH HOH . 
N 6 HOH A 68 769 73 HOH HOH . 
N 6 HOH A 69 770 74 HOH HOH . 
N 6 HOH A 70 771 75 HOH HOH . 
N 6 HOH A 71 772 76 HOH HOH . 
N 6 HOH A 72 773 77 HOH HOH . 
N 6 HOH A 73 774 78 HOH HOH . 
N 6 HOH A 74 775 80 HOH HOH . 
N 6 HOH A 75 776 81 HOH HOH . 
N 6 HOH A 76 777 82 HOH HOH . 
N 6 HOH A 77 778 83 HOH HOH . 
N 6 HOH A 78 779 84 HOH HOH . 
N 6 HOH A 79 780 86 HOH HOH . 
N 6 HOH A 80 781 87 HOH HOH . 
N 6 HOH A 81 782 88 HOH HOH . 
N 6 HOH A 82 783 89 HOH HOH . 
N 6 HOH A 83 784 90 HOH HOH . 
N 6 HOH A 84 785 92 HOH HOH . 
N 6 HOH A 85 786 93 HOH HOH . 
N 6 HOH A 86 787 94 HOH HOH . 
N 6 HOH A 87 788 95 HOH HOH . 
N 6 HOH A 88 789 96 HOH HOH . 
N 6 HOH A 89 790 97 HOH HOH . 
N 6 HOH A 90 791 98 HOH HOH . 
N 6 HOH A 91 792 99 HOH HOH . 
N 6 HOH A 92 793 100 HOH HOH . 
N 6 HOH A 93 794 102 HOH HOH . 
N 6 HOH A 94 795 103 HOH HOH . 
N 6 HOH A 95 796 104 HOH HOH . 
N 6 HOH A 96 797 106 HOH HOH . 
N 6 HOH A 97 798 107 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 3 -20.287 25.334 -29.956 1 33.07 ? C1 EDO 609 A 1 
HETATM 2 O O1 EDO . . . J 3 -21.034 25.288 -28.754 1 35.27 ? O1 EDO 609 A 1 
HETATM 3 C C2 EDO . . . J 3 -18.804 25.474 -29.572 1 31.05 ? C2 EDO 609 A 1 
HETATM 4 O O2 EDO . . . J 3 -18.454 24.338 -28.789 1 30.82 ? O2 EDO 609 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           216 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#