data_4I99 # _model_server_result.job_id jknv817Qf-MnAnkvr6lWag _model_server_result.datetime_utc '2024-11-29 14:11:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i99 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1201}' # _entry.id 4I99 # _exptl.entry_id 4I99 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4I99 _cell.length_a 117.855 _cell.length_b 117.855 _cell.length_c 94.482 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I99 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 57 A ALA 57 1_555 A N MSE 58 A MSE 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 58 A MSE 58 1_555 A N ARG 59 A ARG 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C ALA 133 A ALA 133 1_555 A N MSE 134 A MSE 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C MSE 134 A MSE 134 1_555 A N ILE 135 A ILE 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C LYS 153 A LYS 153 1_555 A N MSE 154 A MSE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 A C MSE 154 A MSE 154 1_555 A N SER 155 A SER 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 A C PHE 190 A PHE 1013 1_555 A N MSE 191 A MSE 1014 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 A C MSE 191 A MSE 1014 1_555 A N ARG 192 A ARG 1015 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale9 A C ALA 245 A ALA 1068 1_555 A N MSE 246 A MSE 1069 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C MSE 246 A MSE 1069 1_555 A N SER 247 A SER 1070 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 A C VAL 309 A VAL 1132 1_555 A N MSE 310 A MSE 1133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 A C MSE 310 A MSE 1133 1_555 A N MSE 311 A MSE 1134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale13 A C MSE 311 A MSE 1134 1_555 A N ALA 312 A ALA 1135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 A C SER 321 A SER 1144 1_555 A N MSE 322 A MSE 1145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale15 A C MSE 322 A MSE 1145 1_555 A N ARG 323 A ARG 1146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale16 A C ALA 337 A ALA 1160 1_555 A N MSE 338 A MSE 1161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale17 B C ALA 57 B ALA 57 1_555 B N MSE 58 B MSE 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale18 B C MSE 58 B MSE 58 1_555 B N ARG 59 B ARG 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 B C ALA 133 B ALA 133 1_555 B N MSE 134 B MSE 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale20 B C MSE 134 B MSE 134 1_555 B N ILE 135 B ILE 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale21 B C LYS 153 B LYS 153 1_555 B N MSE 154 B MSE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 B C MSE 154 B MSE 154 1_555 B N SER 155 B SER 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 B C PHE 190 B PHE 1013 1_555 B N MSE 191 B MSE 1014 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale24 B C MSE 191 B MSE 1014 1_555 B N ARG 192 B ARG 1015 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale25 B C ALA 245 B ALA 1068 1_555 B N MSE 246 B MSE 1069 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale26 B C MSE 246 B MSE 1069 1_555 B N SER 247 B SER 1070 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale27 B C VAL 309 B VAL 1132 1_555 B N MSE 310 B MSE 1133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale28 B C MSE 310 B MSE 1133 1_555 B N MSE 311 B MSE 1134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale29 B C MSE 311 B MSE 1134 1_555 B N ALA 312 B ALA 1135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale30 B C SER 321 B SER 1144 1_555 B N MSE 322 B MSE 1145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale31 B C MSE 322 B MSE 1145 1_555 B N ARG 323 B ARG 1146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale32 B C ALA 337 B ALA 1160 1_555 B N MSE 338 B MSE 1161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale33 B C MSE 338 B MSE 1161 1_555 B N LYS 339 B LYS 1162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 266 n n P O2 PO4 sing 267 n n P O3 PO4 sing 268 n n P O4 PO4 sing 269 n n # _atom_sites.entry_id 4I99 _atom_sites.fract_transf_matrix[1][1] 0.008485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PO4 A 1 1201 1 PO4 PO4 . F 3 PO4 A 1 1202 3 PO4 PO4 . G 3 PO4 B 1 1201 2 PO4 PO4 . H 4 HOH A 1 1301 3 HOH HOH . H 4 HOH A 2 1302 4 HOH HOH . H 4 HOH A 3 1303 5 HOH HOH . H 4 HOH A 4 1304 6 HOH HOH . H 4 HOH A 5 1305 9 HOH HOH . H 4 HOH A 6 1306 11 HOH HOH . H 4 HOH A 7 1307 12 HOH HOH . H 4 HOH A 8 1308 16 HOH HOH . H 4 HOH A 9 1309 17 HOH HOH . H 4 HOH A 10 1310 20 HOH HOH . H 4 HOH A 11 1311 21 HOH HOH . H 4 HOH A 12 1312 22 HOH HOH . H 4 HOH A 13 1313 25 HOH HOH . H 4 HOH A 14 1314 26 HOH HOH . H 4 HOH A 15 1315 27 HOH HOH . H 4 HOH A 16 1316 28 HOH HOH . H 4 HOH A 17 1317 30 HOH HOH . H 4 HOH A 18 1318 31 HOH HOH . H 4 HOH A 19 1319 33 HOH HOH . H 4 HOH A 20 1320 36 HOH HOH . H 4 HOH A 21 1321 39 HOH HOH . H 4 HOH A 22 1322 41 HOH HOH . H 4 HOH A 23 1323 42 HOH HOH . H 4 HOH A 24 1324 44 HOH HOH . H 4 HOH A 25 1325 51 HOH HOH . H 4 HOH A 26 1326 54 HOH HOH . H 4 HOH A 27 1327 60 HOH HOH . H 4 HOH A 28 1328 61 HOH HOH . H 4 HOH A 29 1329 62 HOH HOH . H 4 HOH A 30 1330 64 HOH HOH . H 4 HOH A 31 1331 65 HOH HOH . H 4 HOH A 32 1332 67 HOH HOH . H 4 HOH A 33 1333 69 HOH HOH . H 4 HOH A 34 1334 71 HOH HOH . H 4 HOH A 35 1335 72 HOH HOH . H 4 HOH A 36 1336 73 HOH HOH . H 4 HOH A 37 1337 76 HOH HOH . H 4 HOH A 38 1338 77 HOH HOH . H 4 HOH A 39 1339 78 HOH HOH . H 4 HOH A 40 1340 81 HOH HOH . H 4 HOH A 41 1341 82 HOH HOH . H 4 HOH A 42 1342 89 HOH HOH . H 4 HOH A 43 1343 90 HOH HOH . I 4 HOH B 1 1301 1 HOH HOH . I 4 HOH B 2 1302 2 HOH HOH . I 4 HOH B 3 1303 7 HOH HOH . I 4 HOH B 4 1304 8 HOH HOH . I 4 HOH B 5 1305 10 HOH HOH . I 4 HOH B 6 1306 13 HOH HOH . I 4 HOH B 7 1307 14 HOH HOH . I 4 HOH B 8 1308 15 HOH HOH . I 4 HOH B 9 1309 18 HOH HOH . I 4 HOH B 10 1310 19 HOH HOH . I 4 HOH B 11 1311 23 HOH HOH . I 4 HOH B 12 1312 29 HOH HOH . I 4 HOH B 13 1313 32 HOH HOH . I 4 HOH B 14 1314 34 HOH HOH . I 4 HOH B 15 1315 37 HOH HOH . I 4 HOH B 16 1316 38 HOH HOH . I 4 HOH B 17 1317 40 HOH HOH . I 4 HOH B 18 1318 43 HOH HOH . I 4 HOH B 19 1319 45 HOH HOH . I 4 HOH B 20 1320 46 HOH HOH . I 4 HOH B 21 1321 47 HOH HOH . I 4 HOH B 22 1322 48 HOH HOH . I 4 HOH B 23 1323 49 HOH HOH . I 4 HOH B 24 1324 50 HOH HOH . I 4 HOH B 25 1325 52 HOH HOH . I 4 HOH B 26 1326 53 HOH HOH . I 4 HOH B 27 1327 55 HOH HOH . I 4 HOH B 28 1328 56 HOH HOH . I 4 HOH B 29 1329 57 HOH HOH . I 4 HOH B 30 1330 58 HOH HOH . I 4 HOH B 31 1331 59 HOH HOH . I 4 HOH B 32 1332 63 HOH HOH . I 4 HOH B 33 1333 66 HOH HOH . I 4 HOH B 34 1334 70 HOH HOH . I 4 HOH B 35 1335 79 HOH HOH . I 4 HOH B 36 1336 80 HOH HOH . I 4 HOH B 37 1337 83 HOH HOH . I 4 HOH B 38 1338 84 HOH HOH . I 4 HOH B 39 1339 85 HOH HOH . I 4 HOH B 40 1340 86 HOH HOH . I 4 HOH B 41 1341 87 HOH HOH . I 4 HOH B 42 1342 88 HOH HOH . I 4 HOH B 43 1343 91 HOH HOH . J 4 HOH C 1 301 24 HOH HOH . J 4 HOH C 2 302 35 HOH HOH . J 4 HOH C 3 303 68 HOH HOH . J 4 HOH C 4 304 74 HOH HOH . J 4 HOH C 5 305 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 3 74.312 5.088 60.168 1 45.08 ? P PO4 1201 A 1 HETATM 2 O O1 PO4 . . . E 3 73.363 6.024 60.82 1 45.93 ? O1 PO4 1201 A 1 HETATM 3 O O2 PO4 . . . E 3 74.416 5.418 58.726 1 46.38 ? O2 PO4 1201 A 1 HETATM 4 O O3 PO4 . . . E 3 75.648 5.21 60.803 1 47.13 ? O3 PO4 1201 A 1 HETATM 5 O O4 PO4 . . . E 3 73.821 3.699 60.324 1 47.55 ? O4 PO4 1201 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #