data_4I9O # _model_server_result.job_id bkQtrHxTRpWgTg24JqUoTQ _model_server_result.datetime_utc '2025-02-05 03:56:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i9o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 4I9O # _exptl.entry_id 4I9O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 367.814 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-{4-[4-chloro-3-(trifluoromethyl)phenyl]-4-hydroxypiperidin-1-yl}-3-sulfanylpropan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4I9O _cell.length_a 48.33 _cell.length_b 48.33 _cell.length_c 85.464 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I9O _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 48.33 48.33 42.732 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 53 A ARG 624 1_555 A N MSE 54 A MSE 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale2 A C MSE 54 A MSE 625 1_555 A N GLU 55 A GLU 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale3 A C ASP 67 A ASP 638 1_555 A N MSE 68 A MSE 639 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale4 A C MSE 68 A MSE 639 1_555 A N TYR 69 A TYR 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale5 A SG CYS 93 A CYS 664 1_555 B S KI1 . A KI1 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? # _chem_comp.formula 'C15 H17 Cl F3 N O2 S' _chem_comp.formula_weight 367.814 _chem_comp.id KI1 _chem_comp.mon_nstd_flag . _chem_comp.name 1-{4-[4-chloro-3-(trifluoromethyl)phenyl]-4-hydroxypiperidin-1-yl}-3-sulfanylpropan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 S KI1 sing 182 n n C1 C2 KI1 sing 183 n n O2 C3 KI1 doub 184 n n C2 C3 KI1 sing 185 n n C3 N KI1 sing 186 n n C14 C15 KI1 doub 187 n y C14 C13 KI1 sing 188 n y C15 C9 KI1 sing 189 n y N C6 KI1 sing 190 n n N C4 KI1 sing 191 n n C7 C6 KI1 sing 192 n n C7 C8 KI1 sing 193 n n CL C13 KI1 sing 194 n n C13 C11 KI1 doub 195 n y C9 C8 KI1 sing 196 n n C9 C10 KI1 doub 197 n y C4 C5 KI1 sing 198 n n C8 C5 KI1 sing 199 n n C8 O1 KI1 sing 200 n n C11 C10 KI1 sing 201 n y C11 C12 KI1 sing 202 n n C12 F1 KI1 sing 203 n n C12 F2 KI1 sing 204 n n C12 F3 KI1 sing 205 n n C2 H1 KI1 sing 206 n n C2 H2 KI1 sing 207 n n C1 H3 KI1 sing 208 n n C1 H4 KI1 sing 209 n n S H5 KI1 sing 210 n n C6 H6 KI1 sing 211 n n C6 H7 KI1 sing 212 n n C7 H8 KI1 sing 213 n n C7 H9 KI1 sing 214 n n O1 H10 KI1 sing 215 n n C5 H11 KI1 sing 216 n n C5 H12 KI1 sing 217 n n C4 H13 KI1 sing 218 n n C4 H14 KI1 sing 219 n n C15 H15 KI1 sing 220 n n C14 H16 KI1 sing 221 n n C10 H17 KI1 sing 222 n n # _atom_sites.entry_id 4I9O _atom_sites.fract_transf_matrix[1][1] 0.020691 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011701 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KI1 A 1 701 1 KI1 KI1 . C 3 EDO A 1 702 1 EDO EDO . D 3 EDO A 1 703 2 EDO EDO . E 4 HOH A 1 801 1 HOH HOH . E 4 HOH A 2 802 2 HOH HOH . E 4 HOH A 3 803 3 HOH HOH . E 4 HOH A 4 804 4 HOH HOH . E 4 HOH A 5 805 5 HOH HOH . E 4 HOH A 6 806 6 HOH HOH . E 4 HOH A 7 807 7 HOH HOH . E 4 HOH A 8 808 8 HOH HOH . E 4 HOH A 9 809 9 HOH HOH . E 4 HOH A 10 810 10 HOH HOH . E 4 HOH A 11 811 11 HOH HOH . E 4 HOH A 12 812 12 HOH HOH . E 4 HOH A 13 813 13 HOH HOH . E 4 HOH A 14 814 14 HOH HOH . E 4 HOH A 15 815 15 HOH HOH . E 4 HOH A 16 816 16 HOH HOH . E 4 HOH A 17 817 17 HOH HOH . E 4 HOH A 18 818 18 HOH HOH . E 4 HOH A 19 819 19 HOH HOH . E 4 HOH A 20 820 20 HOH HOH . E 4 HOH A 21 821 21 HOH HOH . E 4 HOH A 22 822 22 HOH HOH . E 4 HOH A 23 823 23 HOH HOH . E 4 HOH A 24 824 24 HOH HOH . E 4 HOH A 25 825 25 HOH HOH . E 4 HOH A 26 826 26 HOH HOH . E 4 HOH A 27 827 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 KI1 . . . B 2 25.266 -2.137 14.493 1 66.82 ? O2 KI1 701 A 1 HETATM 2 C C3 KI1 . . . B 2 25.938 -1.699 15.41 1 61.75 ? C3 KI1 701 A 1 HETATM 3 C C2 KI1 . . . B 2 27.443 -1.834 15.384 1 61.87 ? C2 KI1 701 A 1 HETATM 4 C C1 KI1 . . . B 2 28.473 -1.504 14.408 1 62.77 ? C1 KI1 701 A 1 HETATM 5 S S KI1 . . . B 2 28.767 0.284 14.462 1 62.03 ? S KI1 701 A 1 HETATM 6 N N KI1 . . . B 2 25.377 -1.073 16.465 1 57.27 ? N KI1 701 A 1 HETATM 7 C C6 KI1 . . . B 2 23.943 -0.779 16.587 1 55.64 ? C6 KI1 701 A 1 HETATM 8 C C7 KI1 . . . B 2 23.685 0.722 16.532 1 52.98 ? C7 KI1 701 A 1 HETATM 9 C C8 KI1 . . . B 2 24.443 1.456 17.647 1 49.11 ? C8 KI1 701 A 1 HETATM 10 O O1 KI1 . . . B 2 23.839 1.101 18.893 1 48.55 ? O1 KI1 701 A 1 HETATM 11 C C5 KI1 . . . B 2 25.895 0.97 17.704 1 52.43 ? C5 KI1 701 A 1 HETATM 12 C C4 KI1 . . . B 2 26.124 -0.527 17.605 1 55.47 ? C4 KI1 701 A 1 HETATM 13 C C9 KI1 . . . B 2 24.381 2.971 17.478 1 45.8 ? C9 KI1 701 A 1 HETATM 14 C C15 KI1 . . . B 2 24.457 3.573 16.223 1 46.98 ? C15 KI1 701 A 1 HETATM 15 C C14 KI1 . . . B 2 24.422 4.952 16.09 1 48.98 ? C14 KI1 701 A 1 HETATM 16 C C13 KI1 . . . B 2 24.327 5.754 17.222 1 49.26 ? C13 KI1 701 A 1 HETATM 17 CL CL KI1 . . . B 2 24.309 7.475 17.006 1 56.14 ? CL KI1 701 A 1 HETATM 18 C C11 KI1 . . . B 2 24.255 5.187 18.493 1 46.65 ? C11 KI1 701 A 1 HETATM 19 C C10 KI1 . . . B 2 24.277 3.8 18.591 1 45.27 ? C10 KI1 701 A 1 HETATM 20 C C12 KI1 . . . B 2 24.213 6.02 19.737 1 48.37 ? C12 KI1 701 A 1 HETATM 21 F F1 KI1 . . . B 2 23.132 6.787 19.798 1 49.21 ? F1 KI1 701 A 1 HETATM 22 F F2 KI1 . . . B 2 25.251 6.831 19.808 1 48.96 ? F2 KI1 701 A 1 HETATM 23 F F3 KI1 . . . B 2 24.141 5.301 20.838 1 47.44 ? F3 KI1 701 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #