data_4I9T # _model_server_result.job_id C8i1p5JublTl5bxCTUqphw _model_server_result.datetime_utc '2024-11-23 19:53:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 4I9T # _exptl.entry_id 4I9T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4I9T _cell.length_a 85.587 _cell.length_b 57.829 _cell.length_c 60.783 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id INS _chem_comp.mon_nstd_flag . _chem_comp.name 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms MYO-INOSITOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 INS sing 160 n n C1 C6 INS sing 161 n n C1 O1 INS sing 162 n n C1 H1 INS sing 163 n n C2 C3 INS sing 164 n n C2 O2 INS sing 165 n n C2 H2 INS sing 166 n n C3 C4 INS sing 167 n n C3 O3 INS sing 168 n n C3 H3 INS sing 169 n n C4 C5 INS sing 170 n n C4 O4 INS sing 171 n n C4 H4 INS sing 172 n n C5 C6 INS sing 173 n n C5 O5 INS sing 174 n n C5 H5 INS sing 175 n n C6 O6 INS sing 176 n n C6 H6 INS sing 177 n n O1 HO1 INS sing 178 n n O2 HO2 INS sing 179 n n O3 HO3 INS sing 180 n n O4 HO4 INS sing 181 n n O5 HO5 INS sing 182 n n O6 HO6 INS sing 183 n n # _atom_sites.entry_id 4I9T _atom_sites.fract_transf_matrix[1][1] 0.011684 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017292 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 501 501 SO4 SO4 . C 3 INS A 1 502 502 INS INS . D 3 INS A 1 503 503 INS INS . E 4 PGE A 1 504 504 PGE PIG . F 4 PGE A 1 505 505 PGE PIG . G 5 HOH A 1 601 1 HOH HOH . G 5 HOH A 2 602 2 HOH HOH . G 5 HOH A 3 603 3 HOH HOH . G 5 HOH A 4 604 4 HOH HOH . G 5 HOH A 5 605 5 HOH HOH . G 5 HOH A 6 606 6 HOH HOH . G 5 HOH A 7 607 7 HOH HOH . G 5 HOH A 8 608 8 HOH HOH . G 5 HOH A 9 609 9 HOH HOH . G 5 HOH A 10 610 10 HOH HOH . G 5 HOH A 11 611 11 HOH HOH . G 5 HOH A 12 612 12 HOH HOH . G 5 HOH A 13 613 13 HOH HOH . G 5 HOH A 14 614 14 HOH HOH . G 5 HOH A 15 615 15 HOH HOH . G 5 HOH A 16 616 16 HOH HOH . G 5 HOH A 17 617 17 HOH HOH . G 5 HOH A 18 618 18 HOH HOH . G 5 HOH A 19 619 19 HOH HOH . G 5 HOH A 20 620 20 HOH HOH . G 5 HOH A 21 621 21 HOH HOH . G 5 HOH A 22 622 22 HOH HOH . G 5 HOH A 23 623 24 HOH HOH . G 5 HOH A 24 624 25 HOH HOH . G 5 HOH A 25 625 27 HOH HOH . G 5 HOH A 26 626 28 HOH HOH . G 5 HOH A 27 627 29 HOH HOH . G 5 HOH A 28 628 30 HOH HOH . G 5 HOH A 29 629 31 HOH HOH . G 5 HOH A 30 630 32 HOH HOH . G 5 HOH A 31 631 33 HOH HOH . G 5 HOH A 32 632 34 HOH HOH . G 5 HOH A 33 633 35 HOH HOH . G 5 HOH A 34 634 36 HOH HOH . G 5 HOH A 35 635 37 HOH HOH . G 5 HOH A 36 636 39 HOH HOH . G 5 HOH A 37 637 40 HOH HOH . G 5 HOH A 38 638 41 HOH HOH . G 5 HOH A 39 639 42 HOH HOH . G 5 HOH A 40 640 43 HOH HOH . G 5 HOH A 41 641 44 HOH HOH . G 5 HOH A 42 642 45 HOH HOH . G 5 HOH A 43 643 46 HOH HOH . G 5 HOH A 44 644 48 HOH HOH . G 5 HOH A 45 645 49 HOH HOH . G 5 HOH A 46 646 50 HOH HOH . G 5 HOH A 47 647 51 HOH HOH . G 5 HOH A 48 648 52 HOH HOH . G 5 HOH A 49 649 53 HOH HOH . G 5 HOH A 50 650 54 HOH HOH . G 5 HOH A 51 651 55 HOH HOH . G 5 HOH A 52 652 56 HOH HOH . G 5 HOH A 53 653 57 HOH HOH . G 5 HOH A 54 654 58 HOH HOH . G 5 HOH A 55 655 59 HOH HOH . G 5 HOH A 56 656 60 HOH HOH . G 5 HOH A 57 657 61 HOH HOH . G 5 HOH A 58 658 63 HOH HOH . G 5 HOH A 59 659 64 HOH HOH . G 5 HOH A 60 660 65 HOH HOH . G 5 HOH A 61 661 66 HOH HOH . G 5 HOH A 62 662 67 HOH HOH . G 5 HOH A 63 663 68 HOH HOH . G 5 HOH A 64 664 69 HOH HOH . G 5 HOH A 65 665 70 HOH HOH . G 5 HOH A 66 666 71 HOH HOH . G 5 HOH A 67 667 72 HOH HOH . G 5 HOH A 68 668 73 HOH HOH . G 5 HOH A 69 669 74 HOH HOH . G 5 HOH A 70 670 75 HOH HOH . G 5 HOH A 71 671 76 HOH HOH . G 5 HOH A 72 672 77 HOH HOH . G 5 HOH A 73 673 78 HOH HOH . G 5 HOH A 74 674 79 HOH HOH . G 5 HOH A 75 675 80 HOH HOH . G 5 HOH A 76 676 81 HOH HOH . G 5 HOH A 77 677 82 HOH HOH . G 5 HOH A 78 678 83 HOH HOH . G 5 HOH A 79 679 84 HOH HOH . G 5 HOH A 80 680 85 HOH HOH . G 5 HOH A 81 681 86 HOH HOH . G 5 HOH A 82 682 87 HOH HOH . G 5 HOH A 83 683 88 HOH HOH . G 5 HOH A 84 684 89 HOH HOH . G 5 HOH A 85 685 91 HOH HOH . G 5 HOH A 86 686 92 HOH HOH . G 5 HOH A 87 687 93 HOH HOH . G 5 HOH A 88 688 94 HOH HOH . G 5 HOH A 89 689 96 HOH HOH . G 5 HOH A 90 690 97 HOH HOH . G 5 HOH A 91 691 98 HOH HOH . G 5 HOH A 92 692 99 HOH HOH . G 5 HOH A 93 693 100 HOH HOH . G 5 HOH A 94 694 101 HOH HOH . G 5 HOH A 95 695 102 HOH HOH . G 5 HOH A 96 696 103 HOH HOH . G 5 HOH A 97 697 104 HOH HOH . G 5 HOH A 98 698 105 HOH HOH . G 5 HOH A 99 699 106 HOH HOH . G 5 HOH A 100 700 107 HOH HOH . G 5 HOH A 101 701 108 HOH HOH . G 5 HOH A 102 702 109 HOH HOH . G 5 HOH A 103 703 110 HOH HOH . G 5 HOH A 104 704 111 HOH HOH . G 5 HOH A 105 705 112 HOH HOH . G 5 HOH A 106 706 113 HOH HOH . G 5 HOH A 107 707 114 HOH HOH . G 5 HOH A 108 708 115 HOH HOH . G 5 HOH A 109 709 116 HOH HOH . G 5 HOH A 110 710 117 HOH HOH . G 5 HOH A 111 711 118 HOH HOH . G 5 HOH A 112 712 119 HOH HOH . G 5 HOH A 113 713 120 HOH HOH . G 5 HOH A 114 714 121 HOH HOH . G 5 HOH A 115 715 122 HOH HOH . G 5 HOH A 116 716 123 HOH HOH . G 5 HOH A 117 717 124 HOH HOH . G 5 HOH A 118 718 125 HOH HOH . G 5 HOH A 119 719 126 HOH HOH . G 5 HOH A 120 720 127 HOH HOH . G 5 HOH A 121 721 128 HOH HOH . G 5 HOH A 122 722 129 HOH HOH . G 5 HOH A 123 723 130 HOH HOH . G 5 HOH A 124 724 131 HOH HOH . G 5 HOH A 125 725 132 HOH HOH . G 5 HOH A 126 726 133 HOH HOH . G 5 HOH A 127 727 134 HOH HOH . G 5 HOH A 128 728 135 HOH HOH . G 5 HOH A 129 729 136 HOH HOH . G 5 HOH A 130 730 137 HOH HOH . G 5 HOH A 131 731 139 HOH HOH . G 5 HOH A 132 732 140 HOH HOH . G 5 HOH A 133 733 141 HOH HOH . G 5 HOH A 134 734 142 HOH HOH . G 5 HOH A 135 735 143 HOH HOH . G 5 HOH A 136 736 146 HOH HOH . G 5 HOH A 137 737 147 HOH HOH . G 5 HOH A 138 738 148 HOH HOH . G 5 HOH A 139 739 149 HOH HOH . G 5 HOH A 140 740 150 HOH HOH . G 5 HOH A 141 741 151 HOH HOH . G 5 HOH A 142 742 152 HOH HOH . G 5 HOH A 143 743 153 HOH HOH . G 5 HOH A 144 744 154 HOH HOH . G 5 HOH A 145 745 156 HOH HOH . G 5 HOH A 146 746 157 HOH HOH . G 5 HOH A 147 747 158 HOH HOH . G 5 HOH A 148 748 160 HOH HOH . G 5 HOH A 149 749 161 HOH HOH . G 5 HOH A 150 750 162 HOH HOH . G 5 HOH A 151 751 163 HOH HOH . G 5 HOH A 152 752 164 HOH HOH . G 5 HOH A 153 753 165 HOH HOH . G 5 HOH A 154 754 166 HOH HOH . G 5 HOH A 155 755 167 HOH HOH . G 5 HOH A 156 756 168 HOH HOH . G 5 HOH A 157 757 169 HOH HOH . G 5 HOH A 158 758 170 HOH HOH . G 5 HOH A 159 759 171 HOH HOH . G 5 HOH A 160 760 172 HOH HOH . G 5 HOH A 161 761 173 HOH HOH . G 5 HOH A 162 762 174 HOH HOH . G 5 HOH A 163 763 175 HOH HOH . G 5 HOH A 164 764 176 HOH HOH . G 5 HOH A 165 765 177 HOH HOH . G 5 HOH A 166 766 178 HOH HOH . G 5 HOH A 167 767 179 HOH HOH . G 5 HOH A 168 768 180 HOH HOH . G 5 HOH A 169 769 181 HOH HOH . G 5 HOH A 170 770 182 HOH HOH . G 5 HOH A 171 771 183 HOH HOH . G 5 HOH A 172 772 184 HOH HOH . G 5 HOH A 173 773 185 HOH HOH . G 5 HOH A 174 774 186 HOH HOH . G 5 HOH A 175 775 187 HOH HOH . G 5 HOH A 176 776 188 HOH HOH . G 5 HOH A 177 777 189 HOH HOH . G 5 HOH A 178 778 190 HOH HOH . G 5 HOH A 179 779 191 HOH HOH . G 5 HOH A 180 780 192 HOH HOH . G 5 HOH A 181 781 193 HOH HOH . G 5 HOH A 182 782 194 HOH HOH . G 5 HOH A 183 783 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 INS . . . D 3 -13.314 -21.365 19.646 1 44.25 ? C1 INS 503 A 1 HETATM 2 C C2 INS . . . D 3 -13.944 -21.241 21.067 1 51.05 ? C2 INS 503 A 1 HETATM 3 C C3 INS . . . D 3 -14.742 -22.49 21.473 1 50.97 ? C3 INS 503 A 1 HETATM 4 C C4 INS . . . D 3 -13.944 -23.777 21.304 1 47.09 ? C4 INS 503 A 1 HETATM 5 C C5 INS . . . D 3 -13.613 -23.87 19.819 1 45.98 ? C5 INS 503 A 1 HETATM 6 C C6 INS . . . D 3 -12.635 -22.751 19.411 1 44.56 ? C6 INS 503 A 1 HETATM 7 O O1 INS . . . D 3 -12.511 -20.189 19.387 1 44.24 ? O1 INS 503 A 1 HETATM 8 O O2 INS . . . D 3 -12.926 -21.048 22.031 1 43.87 ? O2 INS 503 A 1 HETATM 9 O O3 INS . . . D 3 -15.138 -22.407 22.834 1 53.15 ? O3 INS 503 A 1 HETATM 10 O O4 INS . . . D 3 -14.79 -24.839 21.751 1 55.68 ? O4 INS 503 A 1 HETATM 11 O O5 INS . . . D 3 -13.167 -25.176 19.402 1 44.51 ? O5 INS 503 A 1 HETATM 12 O O6 INS . . . D 3 -12.301 -23.076 18.05 1 39.75 ? O6 INS 503 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #