data_4I9V # _model_server_result.job_id 2tWTesUknqQHOXmjSNjZpQ _model_server_result.datetime_utc '2024-11-30 21:21:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4i9v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4I9V # _exptl.entry_id 4I9V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4I9V _cell.length_a 25.606 _cell.length_b 41.344 _cell.length_c 64.319 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4I9V _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DT 8 A DT 8 1_555 A P 5HC 9 A 5HC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.591 ? covale ? covale2 A O3' 5HC 9 A 5HC 9 1_555 A P DG 10 A DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.525 ? covale ? covale3 B O3' DT 8 B DT 20 1_555 B P 5HC 9 B 5HC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.566 ? covale ? covale4 B O3' 5HC 9 B 5HC 21 1_555 B P DG 10 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.536 ? metalc ? metalc1 C MG MG . A MG 101 1_555 F O HOH . A HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc2 C MG MG . A MG 101 1_555 F O HOH . A HOH 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc3 C MG MG . A MG 101 1_555 G O HOH . B HOH 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc4 C MG MG . A MG 101 1_555 G O HOH . B HOH 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc5 C MG MG . A MG 101 1_555 G O HOH . B HOH 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc6 C MG MG . A MG 101 1_555 G O HOH . B HOH 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 B N3 DC 11 B DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 B O2 DC 11 B DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 B N4 DC 11 B DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 A DC 3 1_555 B N1 DG 10 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 A DC 3 1_555 B O6 DG 10 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 A DC 3 1_555 B N2 DG 10 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DA 5 A DA 5 1_555 B N3 DT 8 B DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N6 DA 5 A DA 5 1_555 B O4 DT 8 B DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DA 6 A DA 6 1_555 B N3 DT 7 B DT 19 1_555 ? ? ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N6 DA 6 A DA 6 1_555 B O4 DT 7 B DT 19 1_555 ? ? ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DT 7 A DT 7 1_555 B N1 DA 6 B DA 18 1_555 ? ? ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A O4 DT 7 A DT 7 1_555 B N6 DA 6 B DA 18 1_555 ? ? ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N3 DT 8 A DT 8 1_555 B N1 DA 5 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A O4 DT 8 A DT 8 1_555 B N6 DA 5 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N1 DG 10 A DG 10 1_555 B N3 DC 3 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N2 DG 10 A DG 10 1_555 B O2 DC 3 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O6 DG 10 A DG 10 1_555 B N4 DC 3 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N3 DC 11 A DC 11 1_555 B N1 DG 2 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N4 DC 11 A DC 11 1_555 B O6 DG 2 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O2 DC 11 A DC 11 1_555 B N2 DG 2 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N1 DG 12 A DG 12 1_555 B N3 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N2 DG 12 A DG 12 1_555 B O2 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O6 DG 12 A DG 12 1_555 B N4 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4I9V _atom_sites.fract_transf_matrix[1][1] 0.039053 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015548 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 101 101 MG MG . D 3 SPK B 1 101 101 SPK SPK . E 3 SPK B 1 102 102 SPK SPK . F 4 HOH A 1 201 201 HOH HOH . F 4 HOH A 2 202 202 HOH HOH . F 4 HOH A 3 203 203 HOH HOH . F 4 HOH A 4 204 205 HOH HOH . F 4 HOH A 5 205 206 HOH HOH . F 4 HOH A 6 206 207 HOH HOH . F 4 HOH A 7 207 208 HOH HOH . F 4 HOH A 8 208 209 HOH HOH . F 4 HOH A 9 209 210 HOH HOH . F 4 HOH A 10 210 211 HOH HOH . F 4 HOH A 11 211 212 HOH HOH . F 4 HOH A 12 212 213 HOH HOH . F 4 HOH A 13 213 214 HOH HOH . F 4 HOH A 14 214 215 HOH HOH . F 4 HOH A 15 215 216 HOH HOH . F 4 HOH A 16 216 217 HOH HOH . F 4 HOH A 17 217 218 HOH HOH . F 4 HOH A 18 218 219 HOH HOH . F 4 HOH A 19 219 220 HOH HOH . F 4 HOH A 20 220 221 HOH HOH . F 4 HOH A 21 221 222 HOH HOH . F 4 HOH A 22 222 223 HOH HOH . F 4 HOH A 23 223 224 HOH HOH . F 4 HOH A 24 224 225 HOH HOH . F 4 HOH A 25 225 226 HOH HOH . F 4 HOH A 26 226 227 HOH HOH . F 4 HOH A 27 227 228 HOH HOH . F 4 HOH A 28 228 229 HOH HOH . F 4 HOH A 29 229 230 HOH HOH . F 4 HOH A 30 230 231 HOH HOH . F 4 HOH A 31 231 232 HOH HOH . F 4 HOH A 32 232 233 HOH HOH . F 4 HOH A 33 233 234 HOH HOH . F 4 HOH A 34 234 235 HOH HOH . F 4 HOH A 35 235 236 HOH HOH . F 4 HOH A 36 236 237 HOH HOH . F 4 HOH A 37 237 238 HOH HOH . F 4 HOH A 38 238 239 HOH HOH . F 4 HOH A 39 239 240 HOH HOH . F 4 HOH A 40 240 242 HOH HOH . F 4 HOH A 41 241 243 HOH HOH . F 4 HOH A 42 242 244 HOH HOH . F 4 HOH A 43 243 245 HOH HOH . F 4 HOH A 44 244 246 HOH HOH . F 4 HOH A 45 245 247 HOH HOH . F 4 HOH A 46 246 248 HOH HOH . F 4 HOH A 47 247 249 HOH HOH . F 4 HOH A 48 248 250 HOH HOH . F 4 HOH A 49 249 251 HOH HOH . F 4 HOH A 50 250 252 HOH HOH . F 4 HOH A 51 251 253 HOH HOH . F 4 HOH A 52 252 254 HOH HOH . F 4 HOH A 53 253 255 HOH HOH . F 4 HOH A 54 254 256 HOH HOH . F 4 HOH A 55 255 257 HOH HOH . F 4 HOH A 56 256 258 HOH HOH . F 4 HOH A 57 257 259 HOH HOH . F 4 HOH A 58 258 260 HOH HOH . F 4 HOH A 59 259 261 HOH HOH . F 4 HOH A 60 260 262 HOH HOH . F 4 HOH A 61 261 263 HOH HOH . F 4 HOH A 62 262 264 HOH HOH . F 4 HOH A 63 263 265 HOH HOH . F 4 HOH A 64 264 266 HOH HOH . F 4 HOH A 65 265 267 HOH HOH . F 4 HOH A 66 266 268 HOH HOH . F 4 HOH A 67 267 269 HOH HOH . F 4 HOH A 68 268 270 HOH HOH . F 4 HOH A 69 269 271 HOH HOH . F 4 HOH A 70 270 272 HOH HOH . F 4 HOH A 71 271 273 HOH HOH . F 4 HOH A 72 272 274 HOH HOH . F 4 HOH A 73 273 275 HOH HOH . F 4 HOH A 74 274 276 HOH HOH . F 4 HOH A 75 275 277 HOH HOH . F 4 HOH A 76 276 278 HOH HOH . F 4 HOH A 77 277 279 HOH HOH . F 4 HOH A 78 278 280 HOH HOH . F 4 HOH A 79 279 281 HOH HOH . F 4 HOH A 80 280 282 HOH HOH . F 4 HOH A 81 281 283 HOH HOH . F 4 HOH A 82 282 294 HOH HOH . F 4 HOH A 83 283 241 HOH HOH . G 4 HOH B 1 201 204 HOH HOH . G 4 HOH B 2 202 201 HOH HOH . G 4 HOH B 3 203 202 HOH HOH . G 4 HOH B 4 204 203 HOH HOH . G 4 HOH B 5 205 204 HOH HOH . G 4 HOH B 6 206 205 HOH HOH . G 4 HOH B 7 207 206 HOH HOH . G 4 HOH B 8 208 207 HOH HOH . G 4 HOH B 9 209 208 HOH HOH . G 4 HOH B 10 210 209 HOH HOH . G 4 HOH B 11 211 210 HOH HOH . G 4 HOH B 12 212 211 HOH HOH . G 4 HOH B 13 213 212 HOH HOH . G 4 HOH B 14 214 213 HOH HOH . G 4 HOH B 15 215 214 HOH HOH . G 4 HOH B 16 216 215 HOH HOH . G 4 HOH B 17 217 216 HOH HOH . G 4 HOH B 18 218 217 HOH HOH . G 4 HOH B 19 219 218 HOH HOH . G 4 HOH B 20 220 219 HOH HOH . G 4 HOH B 21 221 220 HOH HOH . G 4 HOH B 22 222 221 HOH HOH . G 4 HOH B 23 223 222 HOH HOH . G 4 HOH B 24 224 223 HOH HOH . G 4 HOH B 25 225 224 HOH HOH . G 4 HOH B 26 226 225 HOH HOH . G 4 HOH B 27 227 226 HOH HOH . G 4 HOH B 28 228 227 HOH HOH . G 4 HOH B 29 229 228 HOH HOH . G 4 HOH B 30 230 229 HOH HOH . G 4 HOH B 31 231 230 HOH HOH . G 4 HOH B 32 232 231 HOH HOH . G 4 HOH B 33 233 232 HOH HOH . G 4 HOH B 34 234 233 HOH HOH . G 4 HOH B 35 235 234 HOH HOH . G 4 HOH B 36 236 235 HOH HOH . G 4 HOH B 37 237 236 HOH HOH . G 4 HOH B 38 238 237 HOH HOH . G 4 HOH B 39 239 238 HOH HOH . G 4 HOH B 40 240 239 HOH HOH . G 4 HOH B 41 241 240 HOH HOH . G 4 HOH B 42 242 241 HOH HOH . G 4 HOH B 43 243 242 HOH HOH . G 4 HOH B 44 244 243 HOH HOH . G 4 HOH B 45 245 244 HOH HOH . G 4 HOH B 46 246 245 HOH HOH . G 4 HOH B 47 247 246 HOH HOH . G 4 HOH B 48 248 247 HOH HOH . G 4 HOH B 49 249 248 HOH HOH . G 4 HOH B 50 250 249 HOH HOH . G 4 HOH B 51 251 250 HOH HOH . G 4 HOH B 52 252 251 HOH HOH . G 4 HOH B 53 253 252 HOH HOH . G 4 HOH B 54 254 253 HOH HOH . G 4 HOH B 55 255 254 HOH HOH . G 4 HOH B 56 256 255 HOH HOH . G 4 HOH B 57 257 256 HOH HOH . G 4 HOH B 58 258 257 HOH HOH . G 4 HOH B 59 259 258 HOH HOH . G 4 HOH B 60 260 259 HOH HOH . G 4 HOH B 61 261 260 HOH HOH . G 4 HOH B 62 262 261 HOH HOH . G 4 HOH B 63 263 262 HOH HOH . G 4 HOH B 64 264 263 HOH HOH . G 4 HOH B 65 265 264 HOH HOH . G 4 HOH B 66 266 265 HOH HOH . G 4 HOH B 67 267 266 HOH HOH . G 4 HOH B 68 268 267 HOH HOH . G 4 HOH B 69 269 268 HOH HOH . G 4 HOH B 70 270 269 HOH HOH . G 4 HOH B 71 271 270 HOH HOH . G 4 HOH B 72 272 271 HOH HOH . G 4 HOH B 73 273 272 HOH HOH . G 4 HOH B 74 274 273 HOH HOH . G 4 HOH B 75 275 274 HOH HOH . G 4 HOH B 76 276 275 HOH HOH . G 4 HOH B 77 277 276 HOH HOH . G 4 HOH B 78 278 277 HOH HOH . G 4 HOH B 79 279 278 HOH HOH . G 4 HOH B 80 280 279 HOH HOH . G 4 HOH B 81 281 280 HOH HOH . G 4 HOH B 82 282 281 HOH HOH . G 4 HOH B 83 283 282 HOH HOH . G 4 HOH B 84 284 283 HOH HOH . G 4 HOH B 85 285 284 HOH HOH . G 4 HOH B 86 286 285 HOH HOH . G 4 HOH B 87 287 286 HOH HOH . G 4 HOH B 88 288 287 HOH HOH . G 4 HOH B 89 289 288 HOH HOH . G 4 HOH B 90 290 289 HOH HOH . G 4 HOH B 91 291 290 HOH HOH . G 4 HOH B 92 292 291 HOH HOH . G 4 HOH B 93 293 292 HOH HOH . G 4 HOH B 94 294 293 HOH HOH . G 4 HOH B 95 295 295 HOH HOH . G 4 HOH B 96 296 296 HOH HOH . G 4 HOH B 97 297 297 HOH HOH . G 4 HOH B 98 298 298 HOH HOH . G 4 HOH B 99 299 299 HOH HOH . G 4 HOH B 100 300 300 HOH HOH . G 4 HOH B 101 301 301 HOH HOH . G 4 HOH B 102 302 302 HOH HOH . G 4 HOH B 103 303 303 HOH HOH . G 4 HOH B 104 304 304 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -2.09 _atom_site.Cartn_y 10.717 _atom_site.Cartn_z -18.618 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #