data_4IAE # _model_server_result.job_id mAFhc-t8mRgM2X4FL_n-Gg _model_server_result.datetime_utc '2024-11-08 10:03:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4iae # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":202}' # _entry.id 4IAE # _exptl.entry_id 4IAE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 102.046 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MALONATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IAE _cell.length_a 121.913 _cell.length_b 121.913 _cell.length_c 121.913 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IAE _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA trimeric 3 software_defined_assembly 3 PISA trimeric 3 software_defined_assembly 4 PISA hexameric 6 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 A,C,D,E,H 3 1,2,3 B,F,G,I 4 1,2,3 A,B,C,D,E,F,G,H,I 5 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 -z+1/2,-x,y+1/2 0 0 -1 -1 0 0 0 1 0 60.9565 0 60.9565 3 'crystal symmetry operation' 10_545 -y,z-1/2,-x+1/2 0 -1 0 0 0 1 -1 0 0 0 -60.9565 60.9565 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N # _chem_comp.formula 'C3 H2 O4 -2' _chem_comp.formula_weight 102.046 _chem_comp.id MLI _chem_comp.mon_nstd_flag . _chem_comp.name 'MALONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MLI sing 318 n n C1 C3 MLI sing 319 n n C1 H11 MLI sing 320 n n C1 H12 MLI sing 321 n n C2 O6 MLI doub 322 n n C2 O7 MLI sing 323 n n C3 O8 MLI doub 324 n n C3 O9 MLI sing 325 n n # _atom_sites.entry_id 4IAE _atom_sites.fract_transf_matrix[1][1] 0.008203 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1DX A 1 201 1 1DX 1DX . D 3 MLI A 1 202 1 MLI MLI . E 3 MLI A 1 203 2 MLI MLI . F 2 1DX B 1 201 2 1DX 1DX . G 3 MLI B 1 202 3 MLI MLI . H 4 HOH A 1 301 2 HOH HOH . H 4 HOH A 2 302 3 HOH HOH . H 4 HOH A 3 303 4 HOH HOH . H 4 HOH A 4 304 6 HOH HOH . H 4 HOH A 5 305 7 HOH HOH . H 4 HOH A 6 306 12 HOH HOH . H 4 HOH A 7 307 13 HOH HOH . H 4 HOH A 8 308 15 HOH HOH . H 4 HOH A 9 309 16 HOH HOH . H 4 HOH A 10 310 20 HOH HOH . H 4 HOH A 11 311 23 HOH HOH . H 4 HOH A 12 312 28 HOH HOH . H 4 HOH A 13 313 30 HOH HOH . H 4 HOH A 14 314 31 HOH HOH . H 4 HOH A 15 315 33 HOH HOH . H 4 HOH A 16 316 36 HOH HOH . H 4 HOH A 17 317 39 HOH HOH . H 4 HOH A 18 318 42 HOH HOH . H 4 HOH A 19 319 43 HOH HOH . H 4 HOH A 20 320 48 HOH HOH . H 4 HOH A 21 321 50 HOH HOH . H 4 HOH A 22 322 52 HOH HOH . H 4 HOH A 23 323 53 HOH HOH . H 4 HOH A 24 324 55 HOH HOH . H 4 HOH A 25 325 57 HOH HOH . H 4 HOH A 26 326 58 HOH HOH . H 4 HOH A 27 327 60 HOH HOH . H 4 HOH A 28 328 62 HOH HOH . H 4 HOH A 29 329 64 HOH HOH . H 4 HOH A 30 330 65 HOH HOH . H 4 HOH A 31 331 67 HOH HOH . H 4 HOH A 32 332 70 HOH HOH . H 4 HOH A 33 333 72 HOH HOH . H 4 HOH A 34 334 75 HOH HOH . H 4 HOH A 35 335 76 HOH HOH . H 4 HOH A 36 336 77 HOH HOH . H 4 HOH A 37 337 78 HOH HOH . H 4 HOH A 38 338 83 HOH HOH . H 4 HOH A 39 339 85 HOH HOH . H 4 HOH A 40 340 91 HOH HOH . H 4 HOH A 41 341 92 HOH HOH . H 4 HOH A 42 342 93 HOH HOH . H 4 HOH A 43 343 97 HOH HOH . H 4 HOH A 44 344 98 HOH HOH . H 4 HOH A 45 345 99 HOH HOH . H 4 HOH A 46 346 101 HOH HOH . H 4 HOH A 47 347 102 HOH HOH . H 4 HOH A 48 348 103 HOH HOH . H 4 HOH A 49 349 106 HOH HOH . H 4 HOH A 50 350 110 HOH HOH . H 4 HOH A 51 351 111 HOH HOH . H 4 HOH A 52 352 116 HOH HOH . H 4 HOH A 53 353 117 HOH HOH . H 4 HOH A 54 354 118 HOH HOH . H 4 HOH A 55 355 120 HOH HOH . H 4 HOH A 56 356 121 HOH HOH . H 4 HOH A 57 357 122 HOH HOH . H 4 HOH A 58 358 127 HOH HOH . H 4 HOH A 59 359 130 HOH HOH . H 4 HOH A 60 360 133 HOH HOH . H 4 HOH A 61 361 138 HOH HOH . H 4 HOH A 62 362 139 HOH HOH . H 4 HOH A 63 363 141 HOH HOH . H 4 HOH A 64 364 142 HOH HOH . H 4 HOH A 65 365 144 HOH HOH . H 4 HOH A 66 366 145 HOH HOH . H 4 HOH A 67 367 146 HOH HOH . H 4 HOH A 68 368 153 HOH HOH . H 4 HOH A 69 369 155 HOH HOH . H 4 HOH A 70 370 156 HOH HOH . H 4 HOH A 71 371 157 HOH HOH . H 4 HOH A 72 372 158 HOH HOH . H 4 HOH A 73 373 159 HOH HOH . H 4 HOH A 74 374 162 HOH HOH . I 4 HOH B 1 301 1 HOH HOH . I 4 HOH B 2 302 5 HOH HOH . I 4 HOH B 3 303 8 HOH HOH . I 4 HOH B 4 304 9 HOH HOH . I 4 HOH B 5 305 10 HOH HOH . I 4 HOH B 6 306 11 HOH HOH . I 4 HOH B 7 307 14 HOH HOH . I 4 HOH B 8 308 17 HOH HOH . I 4 HOH B 9 309 18 HOH HOH . I 4 HOH B 10 310 19 HOH HOH . I 4 HOH B 11 311 21 HOH HOH . I 4 HOH B 12 312 22 HOH HOH . I 4 HOH B 13 313 24 HOH HOH . I 4 HOH B 14 314 25 HOH HOH . I 4 HOH B 15 315 26 HOH HOH . I 4 HOH B 16 316 27 HOH HOH . I 4 HOH B 17 317 29 HOH HOH . I 4 HOH B 18 318 32 HOH HOH . I 4 HOH B 19 319 34 HOH HOH . I 4 HOH B 20 320 35 HOH HOH . I 4 HOH B 21 321 37 HOH HOH . I 4 HOH B 22 322 38 HOH HOH . I 4 HOH B 23 323 40 HOH HOH . I 4 HOH B 24 324 41 HOH HOH . I 4 HOH B 25 325 44 HOH HOH . I 4 HOH B 26 326 45 HOH HOH . I 4 HOH B 27 327 46 HOH HOH . I 4 HOH B 28 328 47 HOH HOH . I 4 HOH B 29 329 49 HOH HOH . I 4 HOH B 30 330 51 HOH HOH . I 4 HOH B 31 331 54 HOH HOH . I 4 HOH B 32 332 56 HOH HOH . I 4 HOH B 33 333 59 HOH HOH . I 4 HOH B 34 334 61 HOH HOH . I 4 HOH B 35 335 63 HOH HOH . I 4 HOH B 36 336 68 HOH HOH . I 4 HOH B 37 337 71 HOH HOH . I 4 HOH B 38 338 73 HOH HOH . I 4 HOH B 39 339 74 HOH HOH . I 4 HOH B 40 340 79 HOH HOH . I 4 HOH B 41 341 80 HOH HOH . I 4 HOH B 42 342 81 HOH HOH . I 4 HOH B 43 343 82 HOH HOH . I 4 HOH B 44 344 84 HOH HOH . I 4 HOH B 45 345 86 HOH HOH . I 4 HOH B 46 346 87 HOH HOH . I 4 HOH B 47 347 88 HOH HOH . I 4 HOH B 48 348 89 HOH HOH . I 4 HOH B 49 349 90 HOH HOH . I 4 HOH B 50 350 94 HOH HOH . I 4 HOH B 51 351 95 HOH HOH . I 4 HOH B 52 352 96 HOH HOH . I 4 HOH B 53 353 100 HOH HOH . I 4 HOH B 54 354 104 HOH HOH . I 4 HOH B 55 355 105 HOH HOH . I 4 HOH B 56 356 107 HOH HOH . I 4 HOH B 57 357 108 HOH HOH . I 4 HOH B 58 358 109 HOH HOH . I 4 HOH B 59 359 112 HOH HOH . I 4 HOH B 60 360 113 HOH HOH . I 4 HOH B 61 361 115 HOH HOH . I 4 HOH B 62 362 119 HOH HOH . I 4 HOH B 63 363 123 HOH HOH . I 4 HOH B 64 364 124 HOH HOH . I 4 HOH B 65 365 125 HOH HOH . I 4 HOH B 66 366 126 HOH HOH . I 4 HOH B 67 367 128 HOH HOH . I 4 HOH B 68 368 129 HOH HOH . I 4 HOH B 69 369 132 HOH HOH . I 4 HOH B 70 370 134 HOH HOH . I 4 HOH B 71 371 135 HOH HOH . I 4 HOH B 72 372 136 HOH HOH . I 4 HOH B 73 373 137 HOH HOH . I 4 HOH B 74 374 140 HOH HOH . I 4 HOH B 75 375 147 HOH HOH . I 4 HOH B 76 376 148 HOH HOH . I 4 HOH B 77 377 149 HOH HOH . I 4 HOH B 78 378 150 HOH HOH . I 4 HOH B 79 379 152 HOH HOH . I 4 HOH B 80 380 160 HOH HOH . I 4 HOH B 81 381 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLI . . . G 3 -14.283 50.968 83.298 1 86.79 ? C1 MLI 202 B 1 HETATM 2 C C2 MLI . . . G 3 -13.782 52.066 82.388 1 91.49 ? C2 MLI 202 B 1 HETATM 3 C C3 MLI . . . G 3 -15.479 50.295 82.667 1 90.2 ? C3 MLI 202 B 1 HETATM 4 O O6 MLI . . . G 3 -14.311 52.229 81.266 1 88.22 ? O6 MLI 202 B 1 HETATM 5 O O7 MLI . . . G 3 -12.842 52.78 82.795 1 95.13 ? O7 MLI 202 B 1 HETATM 6 O O8 MLI . . . G 3 -15.688 50.394 81.436 1 82.58 ? O8 MLI 202 B 1 HETATM 7 O O9 MLI . . . G 3 -16.231 49.646 83.423 1 93.59 ? O9 MLI 202 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #