data_4IAH # _model_server_result.job_id HKJeTK9i12P31TiXqY3C3Q _model_server_result.datetime_utc '2024-11-08 09:49:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4iah # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4IAH # _exptl.entry_id 4IAH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 623.634 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4-({(4-carboxybutyl)[2-(5-fluoro-2-{[4'-(trifluoromethyl)biphenyl-4-yl]methoxy}phenyl)ethyl]amino}methyl)benzoic acid" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IAH _cell.length_a 122.573 _cell.length_b 122.573 _cell.length_c 122.573 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IAH _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA trimeric 3 software_defined_assembly 3 PISA trimeric 3 software_defined_assembly 4 PISA hexameric 6 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 A,C,D,G 3 1,2,3 B,E,F,H 4 1,2,3 A,B,C,D,E,F,G,H 5 1,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_454 -z-1/2,-x,y-1/2 0 0 -1 -1 0 0 0 1 0 -61.2865 0 -61.2865 3 'crystal symmetry operation' 10_554 -y,z+1/2,-x-1/2 0 -1 0 0 0 1 -1 0 0 0 61.2865 -61.2865 4 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 5 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 121 A GLU 121 1_555 A N SNC 122 A SNC 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C SNC 122 A SNC 122 1_555 A N GLN 123 A GLN 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C GLU 121 B GLU 121 1_555 B N SNC 122 B SNC 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 B C SNC 122 B SNC 122 1_555 B N GLN 123 B GLN 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C35 H33 F4 N O5' _chem_comp.formula_weight 623.634 _chem_comp.id 1DX _chem_comp.mon_nstd_flag . _chem_comp.name "4-({(4-carboxybutyl)[2-(5-fluoro-2-{[4'-(trifluoromethyl)biphenyl-4-yl]methoxy}phenyl)ethyl]amino}methyl)benzoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FAA CAC 1DX sing 1 n n OAA CBG 1DX doub 2 n n CAB CAC 1DX doub 3 n y CAB CAE 1DX sing 4 n y OAB CBH 1DX sing 5 n n CAC CAD 1DX sing 6 n y OAC CBG 1DX sing 7 n n CAD CBN 1DX doub 8 n y OAD CBH 1DX doub 9 n n CAE CBO 1DX doub 10 n y FAE CAI 1DX sing 11 n n CAG CAH 1DX doub 12 n y CAG CAJ 1DX sing 13 n y CAH CAI 1DX sing 14 n n CAH CZD 1DX sing 15 n y CAI FAJ 1DX sing 16 n n CAI FAK 1DX sing 17 n n CAJ CBI 1DX doub 18 n y CAK CBI 1DX sing 19 n y CAK CZD 1DX doub 20 n y CAN CAP 1DX doub 21 n y CAN CBJ 1DX sing 22 n y CAO CAQ 1DX sing 23 n y CAO CBJ 1DX doub 24 n y CAP CBK 1DX sing 25 n y CAQ CBK 1DX doub 26 n y CAR CAT 1DX doub 27 n y CAR CBL 1DX sing 28 n y CAS CAU 1DX sing 29 n y CAS CBL 1DX doub 30 n y CAT CBM 1DX sing 31 n y CAU CBM 1DX doub 32 n y CAV CAW 1DX sing 33 n n CAV CAX 1DX sing 34 n n CAW CBB 1DX sing 35 n n CAX CBG 1DX sing 36 n n CBA CBC 1DX sing 37 n n CBA CBN 1DX sing 38 n n CBB NBP 1DX sing 39 n n CBC NBP 1DX sing 40 n n CBD OBF 1DX sing 41 n n CBD CBK 1DX sing 42 n n CBE CBL 1DX sing 43 n n CBE NBP 1DX sing 44 n n OBF CBO 1DX sing 45 n n CBH CBM 1DX sing 46 n n CBI CBJ 1DX sing 47 n n CBN CBO 1DX sing 48 n y CAB HAB 1DX sing 49 n n OAB H2 1DX sing 50 n n OAC H3 1DX sing 51 n n CAD HAD 1DX sing 52 n n CAE HAE 1DX sing 53 n n CAG HAG 1DX sing 54 n n CAJ HAJ 1DX sing 55 n n CAK HAK 1DX sing 56 n n CAN HAN 1DX sing 57 n n CAO HAO 1DX sing 58 n n CAP HAP 1DX sing 59 n n CAQ HAQ 1DX sing 60 n n CAR HAR 1DX sing 61 n n CAS HAS 1DX sing 62 n n CAT HAT 1DX sing 63 n n CAU HAU 1DX sing 64 n n CAV HAV 1DX sing 65 n n CAV HAVA 1DX sing 66 n n CAW HAW 1DX sing 67 n n CAW HAWA 1DX sing 68 n n CAX HAX 1DX sing 69 n n CAX HAXA 1DX sing 70 n n CBA HBA 1DX sing 71 n n CBA HBAA 1DX sing 72 n n CBB HBB 1DX sing 73 n n CBB HBBA 1DX sing 74 n n CBC HBC 1DX sing 75 n n CBC HBCA 1DX sing 76 n n CBD HBD 1DX sing 77 n n CBD HBDA 1DX sing 78 n n CBE HBE 1DX sing 79 n n CBE HBEA 1DX sing 80 n n CZD HZD 1DX sing 81 n n # _atom_sites.entry_id 4IAH _atom_sites.fract_transf_matrix[1][1] 0.008158 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008158 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008158 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1DX A 1 201 1 1DX 1DX . D 3 MLI A 1 202 1 MLI MLI . E 2 1DX B 1 201 2 1DX 1DX . F 3 MLI B 1 202 2 MLI MLI . G 4 HOH A 1 301 2 HOH HOH . G 4 HOH A 2 302 6 HOH HOH . G 4 HOH A 3 303 12 HOH HOH . G 4 HOH A 4 304 15 HOH HOH . G 4 HOH A 5 305 18 HOH HOH . G 4 HOH A 6 306 21 HOH HOH . G 4 HOH A 7 307 22 HOH HOH . G 4 HOH A 8 308 23 HOH HOH . G 4 HOH A 9 309 25 HOH HOH . G 4 HOH A 10 310 26 HOH HOH . G 4 HOH A 11 311 29 HOH HOH . G 4 HOH A 12 312 30 HOH HOH . G 4 HOH A 13 313 32 HOH HOH . G 4 HOH A 14 314 35 HOH HOH . G 4 HOH A 15 315 39 HOH HOH . H 4 HOH B 1 301 3 HOH HOH . H 4 HOH B 2 302 4 HOH HOH . H 4 HOH B 3 303 5 HOH HOH . H 4 HOH B 4 304 7 HOH HOH . H 4 HOH B 5 305 8 HOH HOH . H 4 HOH B 6 306 9 HOH HOH . H 4 HOH B 7 307 10 HOH HOH . H 4 HOH B 8 308 11 HOH HOH . H 4 HOH B 9 309 13 HOH HOH . H 4 HOH B 10 310 14 HOH HOH . H 4 HOH B 11 311 16 HOH HOH . H 4 HOH B 12 312 19 HOH HOH . H 4 HOH B 13 313 24 HOH HOH . H 4 HOH B 14 314 28 HOH HOH . H 4 HOH B 15 315 31 HOH HOH . H 4 HOH B 16 316 33 HOH HOH . H 4 HOH B 17 317 34 HOH HOH . H 4 HOH B 18 318 36 HOH HOH . H 4 HOH B 19 319 37 HOH HOH . H 4 HOH B 20 320 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAA 1DX . . . C 2 -28.609 9.325 -25.972 1 27.52 ? FAA 1DX 201 A 1 HETATM 2 O OAA 1DX . . . C 2 -19.432 4.818 -26.243 1 29.42 ? OAA 1DX 201 A 1 HETATM 3 C CAB 1DX . . . C 2 -27.915 11.519 -26.467 1 28.1 ? CAB 1DX 201 A 1 HETATM 4 O OAB 1DX . . . C 2 -14.66 11.485 -28.002 1 28.97 ? OAB 1DX 201 A 1 HETATM 5 C CAC 1DX . . . C 2 -27.627 10.166 -26.328 1 27.77 ? CAC 1DX 201 A 1 HETATM 6 O OAC 1DX . . . C 2 -17.843 6.208 -25.688 1 29.74 ? OAC 1DX 201 A 1 HETATM 7 C CAD 1DX . . . C 2 -26.342 9.692 -26.574 1 27.63 ? CAD 1DX 201 A 1 HETATM 8 O OAD 1DX . . . C 2 -15.193 9.782 -29.254 1 28.69 ? OAD 1DX 201 A 1 HETATM 9 C CAE 1DX . . . C 2 -26.921 12.4 -26.873 1 28.14 ? CAE 1DX 201 A 1 HETATM 10 F FAE 1DX . . . C 2 -16.325 18.963 -31.49 1 33.8 ? FAE 1DX 201 A 1 HETATM 11 C CAG 1DX . . . C 2 -18.655 18.217 -30.188 1 32.71 ? CAG 1DX 201 A 1 HETATM 12 C CAH 1DX . . . C 2 -17.548 17.385 -30.335 1 33.08 ? CAH 1DX 201 A 1 HETATM 13 C CAI 1DX . . . C 2 -16.195 17.958 -30.641 1 33.64 ? CAI 1DX 201 A 1 HETATM 14 C CAJ 1DX . . . C 2 -19.901 17.674 -29.884 1 32.29 ? CAJ 1DX 201 A 1 HETATM 15 F FAJ 1DX . . . C 2 -15.64 18.393 -29.518 1 33.35 ? FAJ 1DX 201 A 1 HETATM 16 C CAK 1DX . . . C 2 -18.928 15.472 -29.873 1 32.43 ? CAK 1DX 201 A 1 HETATM 17 F FAK 1DX . . . C 2 -15.439 17.012 -31.177 1 33.93 ? FAK 1DX 201 A 1 HETATM 18 C CAN 1DX . . . C 2 -21.346 14.349 -29.287 1 30.77 ? CAN 1DX 201 A 1 HETATM 19 C CAO 1DX . . . C 2 -22.396 16.507 -29.225 1 30.59 ? CAO 1DX 201 A 1 HETATM 20 C CAP 1DX . . . C 2 -22.558 13.749 -28.985 1 30.4 ? CAP 1DX 201 A 1 HETATM 21 C CAQ 1DX . . . C 2 -23.61 15.908 -28.912 1 30.11 ? CAQ 1DX 201 A 1 HETATM 22 C CAR 1DX . . . C 2 -19.272 10.216 -28.315 1 28.46 ? CAR 1DX 201 A 1 HETATM 23 C CAS 1DX . . . C 2 -18.711 12.152 -27.024 1 28.54 ? CAS 1DX 201 A 1 HETATM 24 C CAT 1DX . . . C 2 -17.933 10.063 -28.661 1 28.52 ? CAT 1DX 201 A 1 HETATM 25 C CAU 1DX . . . C 2 -17.372 12 -27.37 1 28.54 ? CAU 1DX 201 A 1 HETATM 26 C CAV 1DX . . . C 2 -20.128 7.734 -24.573 1 29.3 ? CAV 1DX 201 A 1 HETATM 27 C CAW 1DX . . . C 2 -21.273 8.742 -24.491 1 29.13 ? CAW 1DX 201 A 1 HETATM 28 C CAX 1DX . . . C 2 -20.032 7.108 -25.962 1 29.44 ? CAX 1DX 201 A 1 HETATM 29 C CBA 1DX . . . C 2 -23.941 10.083 -27.212 1 28.08 ? CBA 1DX 201 A 1 HETATM 30 C CBB 1DX . . . C 2 -20.893 10.088 -25.102 1 28.8 ? CBB 1DX 201 A 1 HETATM 31 C CBC 1DX . . . C 2 -23.052 10.454 -26.031 1 28.3 ? CBC 1DX 201 A 1 HETATM 32 C CBD 1DX . . . C 2 -24.978 13.848 -28.424 1 29.48 ? CBD 1DX 201 A 1 HETATM 33 C CBE 1DX . . . C 2 -21.12 11.426 -27.109 1 28.48 ? CBE 1DX 201 A 1 HETATM 34 O OBF 1DX . . . C 2 -24.665 12.805 -27.504 1 28.83 ? OBF 1DX 201 A 1 HETATM 35 C CBG 1DX . . . C 2 -19.037 5.966 -25.956 1 29.48 ? CBG 1DX 201 A 1 HETATM 36 C CBH 1DX . . . C 2 -15.524 10.753 -28.535 1 28.78 ? CBH 1DX 201 A 1 HETATM 37 C CBI 1DX . . . C 2 -20.039 16.298 -29.726 1 31.9 ? CBI 1DX 201 A 1 HETATM 38 C CBJ 1DX . . . C 2 -21.262 15.728 -29.412 1 30.96 ? CBJ 1DX 201 A 1 HETATM 39 C CBK 1DX . . . C 2 -23.688 14.527 -28.803 1 29.92 ? CBK 1DX 201 A 1 HETATM 40 C CBL 1DX . . . C 2 -19.664 11.254 -27.484 1 28.33 ? CBL 1DX 201 A 1 HETATM 41 C CBM 1DX . . . C 2 -16.978 10.962 -28.205 1 28.49 ? CBM 1DX 201 A 1 HETATM 42 C CBN 1DX . . . C 2 -25.344 10.58 -26.961 1 28.01 ? CBN 1DX 201 A 1 HETATM 43 C CBO 1DX . . . C 2 -25.638 11.926 -27.118 1 28.37 ? CBO 1DX 201 A 1 HETATM 44 N NBP 1DX . . . C 2 -21.63 10.262 -26.36 1 28.57 ? NBP 1DX 201 A 1 HETATM 45 C CZD 1DX . . . C 2 -17.684 16.014 -30.171 1 32.71 ? CZD 1DX 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 45 #