data_4IAY # _model_server_result.job_id 9GD2_BpgjvaPmxnIBQo8pA _model_server_result.datetime_utc '2024-10-14 06:14:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4iay # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 4IAY # _exptl.entry_id 4IAY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 87.62 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'STRONTIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IAY _cell.length_a 59.484 _cell.length_b 80.014 _cell.length_c 100.177 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IAY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 144 A PHE 138 1_555 A N SEP 145 A SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C SEP 145 A SEP 139 1_555 A N GLU 146 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C TRP 202 A TRP 196 1_555 A N TPO 203 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C TPO 203 A TPO 197 1_555 A N LEU 204 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C VAL 343 A VAL 337 1_555 A N SEP 344 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale6 A C SEP 344 A SEP 338 1_555 A N ILE 345 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale7 B C ALA 16 S ALA 620 1_555 B N SEP 17 S SEP 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 B C SEP 17 S SEP 621 1_555 B N ILE 18 S ILE 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? metalc ? metalc1 D SR SR . A SR 402 1_555 E O2A ADP . A ADP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc2 D SR SR . A SR 402 1_555 E O1B ADP . A ADP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc3 B O1P SEP 17 S SEP 621 1_555 C SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc4 A OD2 ASP 190 A ASP 184 1_555 D SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc5 A OD2 ASP 190 A ASP 184 1_555 C SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc6 A OD1 ASP 190 A ASP 184 1_555 C SR SR . A SR 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc7 A OD1 ASN 177 A ASN 171 1_555 D SR SR . A SR 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc8 D SR SR . A SR 402 1_555 F O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.769 ? metalc ? metalc9 C SR SR . A SR 401 1_555 G O HOH . S HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc10 C SR SR . A SR 401 1_555 F O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.857 ? metalc ? metalc11 C SR SR . A SR 401 1_555 F O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? metalc ? metalc12 C SR SR . A SR 401 1_555 F O HOH . A HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc13 D SR SR . A SR 402 1_555 G O HOH . S HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? # _chem_comp.formula 'Sr 2' _chem_comp.formula_weight 87.62 _chem_comp.id SR _chem_comp.mon_nstd_flag . _chem_comp.name 'STRONTIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4IAY _atom_sites.fract_transf_matrix[1][1] 0.016811 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009982 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SR A 1 401 351 SR SR . D 3 SR A 1 402 352 SR SR . E 4 ADP A 1 403 353 ADP ADP . F 5 HOH A 1 1001 1001 HOH HOH . F 5 HOH A 2 1002 1003 HOH HOH . F 5 HOH A 3 1003 1004 HOH HOH . F 5 HOH A 4 1004 1007 HOH HOH . F 5 HOH A 5 1005 1008 HOH HOH . F 5 HOH A 6 1006 1009 HOH HOH . F 5 HOH A 7 1007 1010 HOH HOH . F 5 HOH A 8 1008 1011 HOH HOH . F 5 HOH A 9 1009 1012 HOH HOH . F 5 HOH A 10 1010 1013 HOH HOH . F 5 HOH A 11 1011 1015 HOH HOH . F 5 HOH A 12 1012 1016 HOH HOH . F 5 HOH A 13 1013 1017 HOH HOH . F 5 HOH A 14 1014 1019 HOH HOH . F 5 HOH A 15 1015 1020 HOH HOH . F 5 HOH A 16 1016 1021 HOH HOH . F 5 HOH A 17 1017 1022 HOH HOH . F 5 HOH A 18 1018 1023 HOH HOH . F 5 HOH A 19 1019 1024 HOH HOH . F 5 HOH A 20 1020 1025 HOH HOH . F 5 HOH A 21 1021 1026 HOH HOH . F 5 HOH A 22 1022 1028 HOH HOH . F 5 HOH A 23 1023 1029 HOH HOH . F 5 HOH A 24 1024 1030 HOH HOH . F 5 HOH A 25 1025 1031 HOH HOH . F 5 HOH A 26 1026 1033 HOH HOH . F 5 HOH A 27 1027 1034 HOH HOH . F 5 HOH A 28 1028 1035 HOH HOH . F 5 HOH A 29 1029 1038 HOH HOH . F 5 HOH A 30 1030 1039 HOH HOH . F 5 HOH A 31 1031 1041 HOH HOH . F 5 HOH A 32 1032 1043 HOH HOH . F 5 HOH A 33 1033 1044 HOH HOH . F 5 HOH A 34 1034 1045 HOH HOH . F 5 HOH A 35 1035 1046 HOH HOH . F 5 HOH A 36 1036 1047 HOH HOH . F 5 HOH A 37 1037 1048 HOH HOH . F 5 HOH A 38 1038 1049 HOH HOH . F 5 HOH A 39 1039 1050 HOH HOH . F 5 HOH A 40 1040 1051 HOH HOH . F 5 HOH A 41 1041 1052 HOH HOH . F 5 HOH A 42 1042 1054 HOH HOH . F 5 HOH A 43 1043 1055 HOH HOH . F 5 HOH A 44 1044 1056 HOH HOH . F 5 HOH A 45 1045 1057 HOH HOH . F 5 HOH A 46 1046 1058 HOH HOH . F 5 HOH A 47 1047 1059 HOH HOH . F 5 HOH A 48 1048 1060 HOH HOH . F 5 HOH A 49 1049 1061 HOH HOH . F 5 HOH A 50 1050 1062 HOH HOH . F 5 HOH A 51 1051 1063 HOH HOH . F 5 HOH A 52 1052 1064 HOH HOH . F 5 HOH A 53 1053 1065 HOH HOH . F 5 HOH A 54 1054 1066 HOH HOH . F 5 HOH A 55 1055 1067 HOH HOH . F 5 HOH A 56 1056 1068 HOH HOH . F 5 HOH A 57 1057 1070 HOH HOH . F 5 HOH A 58 1058 1071 HOH HOH . F 5 HOH A 59 1059 1072 HOH HOH . F 5 HOH A 60 1060 1073 HOH HOH . F 5 HOH A 61 1061 1074 HOH HOH . F 5 HOH A 62 1062 1075 HOH HOH . F 5 HOH A 63 1063 1076 HOH HOH . F 5 HOH A 64 1064 1077 HOH HOH . F 5 HOH A 65 1065 1078 HOH HOH . F 5 HOH A 66 1066 1079 HOH HOH . F 5 HOH A 67 1067 1080 HOH HOH . F 5 HOH A 68 1068 1081 HOH HOH . F 5 HOH A 69 1069 1082 HOH HOH . F 5 HOH A 70 1070 1083 HOH HOH . F 5 HOH A 71 1071 1084 HOH HOH . F 5 HOH A 72 1072 1085 HOH HOH . F 5 HOH A 73 1073 1086 HOH HOH . F 5 HOH A 74 1074 1087 HOH HOH . F 5 HOH A 75 1075 1088 HOH HOH . F 5 HOH A 76 1076 1089 HOH HOH . F 5 HOH A 77 1077 1090 HOH HOH . F 5 HOH A 78 1078 1092 HOH HOH . F 5 HOH A 79 1079 1093 HOH HOH . F 5 HOH A 80 1080 1094 HOH HOH . F 5 HOH A 81 1081 1095 HOH HOH . F 5 HOH A 82 1082 1097 HOH HOH . F 5 HOH A 83 1083 1098 HOH HOH . F 5 HOH A 84 1084 1099 HOH HOH . F 5 HOH A 85 1085 1100 HOH HOH . F 5 HOH A 86 1086 1101 HOH HOH . F 5 HOH A 87 1087 1102 HOH HOH . F 5 HOH A 88 1088 1103 HOH HOH . F 5 HOH A 89 1089 1104 HOH HOH . F 5 HOH A 90 1090 1105 HOH HOH . F 5 HOH A 91 1091 1106 HOH HOH . F 5 HOH A 92 1092 1107 HOH HOH . F 5 HOH A 93 1093 1108 HOH HOH . F 5 HOH A 94 1094 1109 HOH HOH . F 5 HOH A 95 1095 1110 HOH HOH . F 5 HOH A 96 1096 1111 HOH HOH . F 5 HOH A 97 1097 1114 HOH HOH . F 5 HOH A 98 1098 1115 HOH HOH . F 5 HOH A 99 1099 1117 HOH HOH . F 5 HOH A 100 1100 1118 HOH HOH . F 5 HOH A 101 1101 1120 HOH HOH . F 5 HOH A 102 1102 1121 HOH HOH . F 5 HOH A 103 1103 1122 HOH HOH . F 5 HOH A 104 1104 1123 HOH HOH . F 5 HOH A 105 1105 1124 HOH HOH . F 5 HOH A 106 1106 1125 HOH HOH . F 5 HOH A 107 1107 1126 HOH HOH . F 5 HOH A 108 1108 1127 HOH HOH . F 5 HOH A 109 1109 1128 HOH HOH . F 5 HOH A 110 1110 1129 HOH HOH . F 5 HOH A 111 1111 1131 HOH HOH . F 5 HOH A 112 1112 1132 HOH HOH . F 5 HOH A 113 1113 1133 HOH HOH . F 5 HOH A 114 1114 1134 HOH HOH . F 5 HOH A 115 1115 1135 HOH HOH . F 5 HOH A 116 1116 1137 HOH HOH . F 5 HOH A 117 1117 1138 HOH HOH . F 5 HOH A 118 1118 1139 HOH HOH . F 5 HOH A 119 1119 1140 HOH HOH . F 5 HOH A 120 1120 1141 HOH HOH . F 5 HOH A 121 1121 1142 HOH HOH . F 5 HOH A 122 1122 1143 HOH HOH . F 5 HOH A 123 1123 1145 HOH HOH . F 5 HOH A 124 1124 1146 HOH HOH . F 5 HOH A 125 1125 1147 HOH HOH . F 5 HOH A 126 1126 1148 HOH HOH . F 5 HOH A 127 1127 1149 HOH HOH . F 5 HOH A 128 1128 1150 HOH HOH . F 5 HOH A 129 1129 1151 HOH HOH . F 5 HOH A 130 1130 1152 HOH HOH . F 5 HOH A 131 1131 1154 HOH HOH . F 5 HOH A 132 1132 1155 HOH HOH . F 5 HOH A 133 1133 1156 HOH HOH . F 5 HOH A 134 1134 1157 HOH HOH . F 5 HOH A 135 1135 1158 HOH HOH . F 5 HOH A 136 1136 1159 HOH HOH . F 5 HOH A 137 1137 1160 HOH HOH . F 5 HOH A 138 1138 1161 HOH HOH . F 5 HOH A 139 1139 1162 HOH HOH . F 5 HOH A 140 1140 1163 HOH HOH . F 5 HOH A 141 1141 1164 HOH HOH . F 5 HOH A 142 1142 1165 HOH HOH . F 5 HOH A 143 1143 1167 HOH HOH . F 5 HOH A 144 1144 1168 HOH HOH . F 5 HOH A 145 1145 1169 HOH HOH . F 5 HOH A 146 1146 1171 HOH HOH . F 5 HOH A 147 1147 1172 HOH HOH . F 5 HOH A 148 1148 1173 HOH HOH . F 5 HOH A 149 1149 1174 HOH HOH . F 5 HOH A 150 1150 1175 HOH HOH . F 5 HOH A 151 1151 1177 HOH HOH . F 5 HOH A 152 1152 1178 HOH HOH . F 5 HOH A 153 1153 1179 HOH HOH . F 5 HOH A 154 1154 1180 HOH HOH . F 5 HOH A 155 1155 1181 HOH HOH . F 5 HOH A 156 1156 1182 HOH HOH . F 5 HOH A 157 1157 1183 HOH HOH . F 5 HOH A 158 1158 1184 HOH HOH . F 5 HOH A 159 1159 1185 HOH HOH . F 5 HOH A 160 1160 1187 HOH HOH . F 5 HOH A 161 1161 1189 HOH HOH . F 5 HOH A 162 1162 1190 HOH HOH . F 5 HOH A 163 1163 1191 HOH HOH . F 5 HOH A 164 1164 1192 HOH HOH . F 5 HOH A 165 1165 1193 HOH HOH . F 5 HOH A 166 1166 1194 HOH HOH . F 5 HOH A 167 1167 1195 HOH HOH . F 5 HOH A 168 1168 1196 HOH HOH . G 5 HOH S 1 701 1002 HOH HOH . G 5 HOH S 2 702 1005 HOH HOH . G 5 HOH S 3 703 1006 HOH HOH . G 5 HOH S 4 704 1014 HOH HOH . G 5 HOH S 5 705 1018 HOH HOH . G 5 HOH S 6 706 1027 HOH HOH . G 5 HOH S 7 707 1032 HOH HOH . G 5 HOH S 8 708 1036 HOH HOH . G 5 HOH S 9 709 1037 HOH HOH . G 5 HOH S 10 710 1040 HOH HOH . G 5 HOH S 11 711 1042 HOH HOH . G 5 HOH S 12 712 1053 HOH HOH . G 5 HOH S 13 713 1069 HOH HOH . G 5 HOH S 14 714 1091 HOH HOH . G 5 HOH S 15 715 1096 HOH HOH . G 5 HOH S 16 716 1112 HOH HOH . G 5 HOH S 17 717 1113 HOH HOH . G 5 HOH S 18 718 1116 HOH HOH . G 5 HOH S 19 719 1119 HOH HOH . G 5 HOH S 20 720 1130 HOH HOH . G 5 HOH S 21 721 1136 HOH HOH . G 5 HOH S 22 722 1144 HOH HOH . G 5 HOH S 23 723 1153 HOH HOH . G 5 HOH S 24 724 1166 HOH HOH . G 5 HOH S 25 725 1170 HOH HOH . G 5 HOH S 26 726 1176 HOH HOH . G 5 HOH S 27 727 1186 HOH HOH . G 5 HOH S 28 728 1188 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol SR _atom_site.label_atom_id SR _atom_site.label_comp_id SR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -2.964 _atom_site.Cartn_y 10.221 _atom_site.Cartn_z -16.872 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id SR _atom_site.auth_comp_id SR _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #