data_4IB4 # _model_server_result.job_id fwRTFBLigQSWdHE0Yp6FeA _model_server_result.datetime_utc '2024-11-21 13:58:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ib4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2003}' # _entry.id 4IB4 # _exptl.entry_id 4IB4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IB4 _cell.length_a 60.571 _cell.length_b 119.75 _cell.length_c 170.607 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IB4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 103 A CYS 128 1_555 A SG CYS 182 A CYS 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 366 A CYS 350 1_555 A SG CYS 369 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 A SG CYS 413 A CYS 397 1_555 C C1 PLM . A PLM 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.658 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 4IB4 _atom_sites.fract_transf_matrix[1][1] 0.01651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008351 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005861 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ERM A 1 2001 2001 ERM EGM . C 3 PLM A 1 2002 2002 PLM PLM . D 4 CLR A 1 2003 2003 CLR CLR . E 5 OLC A 1 2004 2004 OLC OLC . F 6 OLB A 1 2005 2005 OLB OLB . G 6 OLB A 1 2006 2006 OLB OLB . H 6 OLB A 1 2007 2007 OLB OLB . I 7 OLA A 1 2008 2008 OLA OLA . J 7 OLA A 1 2009 2009 OLA OLA . K 8 PEG A 1 2010 2010 PEG PEG . L 8 PEG A 1 2011 2011 PEG PEG . M 9 HOH A 1 2012 2012 HOH HOH . M 9 HOH A 2 2013 2013 HOH HOH . M 9 HOH A 3 2014 2014 HOH HOH . M 9 HOH A 4 2015 2015 HOH HOH . M 9 HOH A 5 2016 2016 HOH HOH . M 9 HOH A 6 2017 2017 HOH HOH . M 9 HOH A 7 2018 2018 HOH HOH . M 9 HOH A 8 2019 2019 HOH HOH . M 9 HOH A 9 2020 2020 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . D 4 7.052 26.143 -13.21 1 70.31 ? C1 CLR 2003 A 1 HETATM 2 C C2 CLR . . . D 4 7.059 25.872 -14.718 1 69.96 ? C2 CLR 2003 A 1 HETATM 3 C C3 CLR . . . D 4 6.807 27.126 -15.549 1 70.48 ? C3 CLR 2003 A 1 HETATM 4 C C4 CLR . . . D 4 7.819 28.221 -15.212 1 69.7 ? C4 CLR 2003 A 1 HETATM 5 C C5 CLR . . . D 4 7.871 28.475 -13.713 1 70.24 ? C5 CLR 2003 A 1 HETATM 6 C C6 CLR . . . D 4 7.892 29.77 -13.32 1 70.37 ? C6 CLR 2003 A 1 HETATM 7 C C7 CLR . . . D 4 7.513 30.226 -11.922 1 70.85 ? C7 CLR 2003 A 1 HETATM 8 C C8 CLR . . . D 4 7.852 29.168 -10.861 1 71.74 ? C8 CLR 2003 A 1 HETATM 9 C C9 CLR . . . D 4 7.363 27.773 -11.333 1 71.02 ? C9 CLR 2003 A 1 HETATM 10 C C10 CLR . . . D 4 7.926 27.312 -12.706 1 70.39 ? C10 CLR 2003 A 1 HETATM 11 C C11 CLR . . . D 4 7.312 26.686 -10.231 1 71.59 ? C11 CLR 2003 A 1 HETATM 12 C C12 CLR . . . D 4 6.817 27.161 -8.855 1 72.64 ? C12 CLR 2003 A 1 HETATM 13 C C13 CLR . . . D 4 7.475 28.463 -8.362 1 74.37 ? C13 CLR 2003 A 1 HETATM 14 C C14 CLR . . . D 4 7.256 29.503 -9.474 1 73.56 ? C14 CLR 2003 A 1 HETATM 15 C C15 CLR . . . D 4 7.456 30.884 -8.855 1 74.02 ? C15 CLR 2003 A 1 HETATM 16 C C16 CLR . . . D 4 6.955 30.68 -7.425 1 74.88 ? C16 CLR 2003 A 1 HETATM 17 C C17 CLR . . . D 4 6.715 29.17 -7.218 1 75.64 ? C17 CLR 2003 A 1 HETATM 18 C C18 CLR . . . D 4 8.96 28.228 -7.992 1 75.07 ? C18 CLR 2003 A 1 HETATM 19 C C19 CLR . . . D 4 9.388 26.845 -12.593 1 69.64 ? C19 CLR 2003 A 1 HETATM 20 C C20 CLR . . . D 4 6.834 28.7 -5.745 1 78.34 ? C20 CLR 2003 A 1 HETATM 21 C C21 CLR . . . D 4 6.48 27.23 -5.493 1 78.53 ? C21 CLR 2003 A 1 HETATM 22 C C22 CLR . . . D 4 5.955 29.544 -4.821 1 81.29 ? C22 CLR 2003 A 1 HETATM 23 C C23 CLR . . . D 4 6.604 29.771 -3.465 1 83.66 ? C23 CLR 2003 A 1 HETATM 24 C C24 CLR . . . D 4 5.573 29.596 -2.36 1 86.11 ? C24 CLR 2003 A 1 HETATM 25 C C25 CLR . . . D 4 6.179 29.936 -1.006 1 88.43 ? C25 CLR 2003 A 1 HETATM 26 C C26 CLR . . . D 4 5.776 31.341 -0.575 1 88.61 ? C26 CLR 2003 A 1 HETATM 27 C C27 CLR . . . D 4 5.789 28.895 0.038 1 89.74 ? C27 CLR 2003 A 1 HETATM 28 O O1 CLR . . . D 4 6.923 26.772 -16.93 1 71.31 ? O1 CLR 2003 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #