data_4IB4 # _model_server_result.job_id 6ESJJZ5w9_7QBiVMH4U4HA _model_server_result.datetime_utc '2024-11-21 13:43:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ib4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2007}' # _entry.id 4IB4 # _exptl.entry_id 4IB4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IB4 _cell.length_a 60.571 _cell.length_b 119.75 _cell.length_c 170.607 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IB4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 103 A CYS 128 1_555 A SG CYS 182 A CYS 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 366 A CYS 350 1_555 A SG CYS 369 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 A SG CYS 413 A CYS 397 1_555 C C1 PLM . A PLM 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.658 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLB _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O19 OLB doub 452 n n C1 O20 OLB sing 453 n n C2 C1 OLB sing 454 n n C3 C2 OLB sing 455 n n C4 C3 OLB sing 456 n n C5 C4 OLB sing 457 n n C5 C6 OLB sing 458 n n O20 C21 OLB sing 459 n n C21 C22 OLB sing 460 n n C22 C24 OLB sing 461 n n O23 C22 OLB sing 462 n n C24 O25 OLB sing 463 n n C6 C7 OLB sing 464 n n C7 C8 OLB sing 465 n n C8 C9 OLB sing 466 n n C9 C10 OLB doub 467 z n C10 C11 OLB sing 468 n n C2 H2 OLB sing 469 n n C2 H2A OLB sing 470 n n C3 H3 OLB sing 471 n n C3 H3A OLB sing 472 n n C4 H4 OLB sing 473 n n C4 H4A OLB sing 474 n n C5 H5 OLB sing 475 n n C5 H5A OLB sing 476 n n C21 H21 OLB sing 477 n n C21 H21A OLB sing 478 n n C22 H22 OLB sing 479 n n O23 HO23 OLB sing 480 n n C24 H24 OLB sing 481 n n C24 H24A OLB sing 482 n n O25 HO25 OLB sing 483 n n C6 H16 OLB sing 484 n n C6 H17 OLB sing 485 n n C7 H18 OLB sing 486 n n C7 H19 OLB sing 487 n n C8 H20 OLB sing 488 n n C8 H211 OLB sing 489 n n C9 H221 OLB sing 490 n n C10 H23 OLB sing 491 n n C11 H241 OLB sing 492 n n C11 H25 OLB sing 493 n n C11 C12 OLB sing 494 n n C12 H26 OLB sing 495 n n C12 C13 OLB sing 496 n n C12 H27 OLB sing 497 n n C13 C14 OLB sing 498 n n C13 H28 OLB sing 499 n n C13 H29 OLB sing 500 n n C14 H30 OLB sing 501 n n C14 H31 OLB sing 502 n n C14 C15 OLB sing 503 n n C15 C16 OLB sing 504 n n C15 H32 OLB sing 505 n n C15 H33 OLB sing 506 n n C16 H34 OLB sing 507 n n C16 H35 OLB sing 508 n n C16 C17 OLB sing 509 n n C17 C18 OLB sing 510 n n C17 H36 OLB sing 511 n n C17 H37 OLB sing 512 n n C18 H38 OLB sing 513 n n C18 H39 OLB sing 514 n n C18 H40 OLB sing 515 n n # _atom_sites.entry_id 4IB4 _atom_sites.fract_transf_matrix[1][1] 0.01651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008351 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005861 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ERM A 1 2001 2001 ERM EGM . C 3 PLM A 1 2002 2002 PLM PLM . D 4 CLR A 1 2003 2003 CLR CLR . E 5 OLC A 1 2004 2004 OLC OLC . F 6 OLB A 1 2005 2005 OLB OLB . G 6 OLB A 1 2006 2006 OLB OLB . H 6 OLB A 1 2007 2007 OLB OLB . I 7 OLA A 1 2008 2008 OLA OLA . J 7 OLA A 1 2009 2009 OLA OLA . K 8 PEG A 1 2010 2010 PEG PEG . L 8 PEG A 1 2011 2011 PEG PEG . M 9 HOH A 1 2012 2012 HOH HOH . M 9 HOH A 2 2013 2013 HOH HOH . M 9 HOH A 3 2014 2014 HOH HOH . M 9 HOH A 4 2015 2015 HOH HOH . M 9 HOH A 5 2016 2016 HOH HOH . M 9 HOH A 6 2017 2017 HOH HOH . M 9 HOH A 7 2018 2018 HOH HOH . M 9 HOH A 8 2019 2019 HOH HOH . M 9 HOH A 9 2020 2020 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLB . . . H 6 3.185 21.413 -17.953 1 98.44 ? C1 OLB 2007 A 1 HETATM 2 C C2 OLB . . . H 6 3.034 21.178 -16.458 1 96.6 ? C2 OLB 2007 A 1 HETATM 3 C C3 OLB . . . H 6 4.074 21.785 -15.521 1 95.16 ? C3 OLB 2007 A 1 HETATM 4 C C4 OLB . . . H 6 3.718 21.969 -14.048 1 93.72 ? C4 OLB 2007 A 1 HETATM 5 C C5 OLB . . . H 6 4.777 22.567 -13.13 1 92.32 ? C5 OLB 2007 A 1 HETATM 6 O O19 OLB . . . H 6 3.427 22.543 -18.359 1 99.43 ? O19 OLB 2007 A 1 HETATM 7 O O20 OLB . . . H 6 3.235 20.329 -18.843 1 99.05 ? O20 OLB 2007 A 1 HETATM 8 C C21 OLB . . . H 6 2.284 20.19 -19.873 1 99.95 ? C21 OLB 2007 A 1 HETATM 9 C C22 OLB . . . H 6 2.769 19.962 -21.279 1 100.75 ? C22 OLB 2007 A 1 HETATM 10 O O23 OLB . . . H 6 2.717 18.621 -21.604 1 100.82 ? O23 OLB 2007 A 1 HETATM 11 C C24 OLB . . . H 6 1.933 20.752 -22.25 1 101.03 ? C24 OLB 2007 A 1 HETATM 12 O O25 OLB . . . H 6 2.088 20.496 -23.603 1 100.87 ? O25 OLB 2007 A 1 HETATM 13 C C6 OLB . . . H 6 4.341 23.025 -11.746 1 91.22 ? C6 OLB 2007 A 1 HETATM 14 C C7 OLB . . . H 6 5.411 23.303 -10.708 1 90.29 ? C7 OLB 2007 A 1 HETATM 15 C C8 OLB . . . H 6 5.054 23.117 -9.253 1 89.53 ? C8 OLB 2007 A 1 HETATM 16 C C9 OLB . . . H 6 6.057 22.439 -8.352 1 88.66 ? C9 OLB 2007 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #