data_4IB8 # _model_server_result.job_id QkDE90b-_dk1PM2q2xqk7A _model_server_result.datetime_utc '2024-11-29 09:58:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ib8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4IB8 # _exptl.entry_id 4IB8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.397 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECYL SULFATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4IB8 _cell.length_a 53.25 _cell.length_b 53.25 _cell.length_c 110.88 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IB8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 36.96 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C12 H26 O4 S' _chem_comp.formula_weight 266.397 _chem_comp.id SDS _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECYL SULFATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1S SDS doub 277 n n S O2S SDS sing 278 n n S O3S SDS sing 279 n n S O4 SDS doub 280 n n O2S C1 SDS sing 281 n n O3S H3S SDS sing 282 n n C1 C12 SDS sing 283 n n C1 H1C1 SDS sing 284 n n C1 H1C2 SDS sing 285 n n C2 C3 SDS sing 286 n n C2 H2C1 SDS sing 287 n n C2 H2C2 SDS sing 288 n n C2 H2C3 SDS sing 289 n n C3 C4 SDS sing 290 n n C3 H3C1 SDS sing 291 n n C3 H3C2 SDS sing 292 n n C4 C5 SDS sing 293 n n C4 H4C1 SDS sing 294 n n C4 H4C2 SDS sing 295 n n C5 C6 SDS sing 296 n n C5 H5C1 SDS sing 297 n n C5 H5C2 SDS sing 298 n n C6 C7 SDS sing 299 n n C6 H6C1 SDS sing 300 n n C6 H6C2 SDS sing 301 n n C7 C8 SDS sing 302 n n C7 H7C1 SDS sing 303 n n C7 H7C2 SDS sing 304 n n C8 C9 SDS sing 305 n n C8 H8C1 SDS sing 306 n n C8 H8C2 SDS sing 307 n n C9 C10 SDS sing 308 n n C9 H9C1 SDS sing 309 n n C9 H9C2 SDS sing 310 n n C10 C11 SDS sing 311 n n C10 H101 SDS sing 312 n n C10 H102 SDS sing 313 n n C11 C12 SDS sing 314 n n C11 H111 SDS sing 315 n n C11 H112 SDS sing 316 n n C12 H121 SDS sing 317 n n C12 H122 SDS sing 318 n n # _atom_sites.entry_id 4IB8 _atom_sites.fract_transf_matrix[1][1] 0.018779 _atom_sites.fract_transf_matrix[1][2] 0.010842 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021685 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009019 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SDS A 1 201 1 SDS SDS . C 3 HOH A 1 301 1 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 8 HOH HOH . C 3 HOH A 6 306 9 HOH HOH . C 3 HOH A 7 307 11 HOH HOH . C 3 HOH A 8 308 12 HOH HOH . C 3 HOH A 9 309 13 HOH HOH . C 3 HOH A 10 310 14 HOH HOH . C 3 HOH A 11 311 15 HOH HOH . C 3 HOH A 12 312 16 HOH HOH . C 3 HOH A 13 313 19 HOH HOH . C 3 HOH A 14 314 20 HOH HOH . C 3 HOH A 15 315 21 HOH HOH . C 3 HOH A 16 316 23 HOH HOH . C 3 HOH A 17 317 317 HOH HOH . C 3 HOH A 18 318 25 HOH HOH . C 3 HOH A 19 319 26 HOH HOH . C 3 HOH A 20 320 28 HOH HOH . C 3 HOH A 21 321 30 HOH HOH . C 3 HOH A 22 322 31 HOH HOH . C 3 HOH A 23 323 32 HOH HOH . C 3 HOH A 24 324 33 HOH HOH . C 3 HOH A 25 325 34 HOH HOH . C 3 HOH A 26 326 35 HOH HOH . C 3 HOH A 27 327 36 HOH HOH . C 3 HOH A 28 328 37 HOH HOH . C 3 HOH A 29 329 38 HOH HOH . C 3 HOH A 30 330 39 HOH HOH . C 3 HOH A 31 331 40 HOH HOH . C 3 HOH A 32 332 41 HOH HOH . C 3 HOH A 33 333 42 HOH HOH . C 3 HOH A 34 334 43 HOH HOH . C 3 HOH A 35 335 44 HOH HOH . C 3 HOH A 36 336 45 HOH HOH . C 3 HOH A 37 337 46 HOH HOH . C 3 HOH A 38 338 47 HOH HOH . C 3 HOH A 39 339 48 HOH HOH . C 3 HOH A 40 340 49 HOH HOH . C 3 HOH A 41 341 51 HOH HOH . C 3 HOH A 42 342 52 HOH HOH . C 3 HOH A 43 343 53 HOH HOH . C 3 HOH A 44 344 54 HOH HOH . C 3 HOH A 45 345 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SDS . . . B 2 -3.796 1.61 0.573 0.7 76.66 ? S SDS 201 A 1 HETATM 2 O O1S SDS . . . B 2 -2.836 0.587 0.09 0.7 73.76 ? O1S SDS 201 A 1 HETATM 3 O O2S SDS . . . B 2 -4.997 0.944 1.323 0.7 69.65 ? O2S SDS 201 A 1 HETATM 4 O O3S SDS . . . B 2 -3.121 2.516 1.529 0.7 78.44 ? O3S SDS 201 A 1 HETATM 5 O O4 SDS . . . B 2 -4.259 2.42 -0.581 0.7 75.93 ? O4 SDS 201 A 1 HETATM 6 C C1 SDS . . . B 2 -5.751 -0.14 0.769 0.7 61.28 ? C1 SDS 201 A 1 HETATM 7 C C2 SDS . . . B 2 -17.665 5.388 -1.571 0.7 29.31 ? C2 SDS 201 A 1 HETATM 8 C C3 SDS . . . B 2 -16.255 5.048 -1.986 0.7 28.78 ? C3 SDS 201 A 1 HETATM 9 C C4 SDS . . . B 2 -15.309 5.098 -0.799 0.7 28.7 ? C4 SDS 201 A 1 HETATM 10 C C5 SDS . . . B 2 -14.219 4.049 -0.992 0.7 29.76 ? C5 SDS 201 A 1 HETATM 11 C C6 SDS . . . B 2 -12.975 4.368 -0.179 0.7 30.68 ? C6 SDS 201 A 1 HETATM 12 C C7 SDS . . . B 2 -12.321 3.069 0.269 0.7 32.66 ? C7 SDS 201 A 1 HETATM 13 C C8 SDS . . . B 2 -10.862 2.984 -0.161 0.7 36.64 ? C8 SDS 201 A 1 HETATM 14 C C9 SDS . . . B 2 -9.983 2.47 0.965 0.7 39.62 ? C9 SDS 201 A 1 HETATM 15 C C10 SDS . . . B 2 -9.219 1.239 0.515 0.7 43.22 ? C10 SDS 201 A 1 HETATM 16 C C11 SDS . . . B 2 -7.737 1.383 0.825 0.7 47.56 ? C11 SDS 201 A 1 HETATM 17 C C12 SDS . . . B 2 -6.939 0.398 -0.016 0.7 53.21 ? C12 SDS 201 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 17 #