data_4IBG
#
_model_server_result.job_id            I9Ft1hg5Scsn_Fj92l1yug 
_model_server_result.datetime_utc      '2024-11-16 23:19:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ibg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":405}' 
#
_entry.id    4IBG 
#
_exptl.entry_id    4IBG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4IBG 
_cell.length_a            51.474 
_cell.length_b            65.937 
_cell.length_c            72.48 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IBG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 J N N 
? 4 K N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 189 n n 
C1 C2 GOL sing 190 n n 
C1 H11 GOL sing 191 n n 
C1 H12 GOL sing 192 n n 
O1 HO1 GOL sing 193 n n 
C2 O2 GOL sing 194 n n 
C2 C3 GOL sing 195 n n 
C2 H2 GOL sing 196 n n 
O2 HO2 GOL sing 197 n n 
C3 O3 GOL sing 198 n n 
C3 H31 GOL sing 199 n n 
C3 H32 GOL sing 200 n n 
O3 HO3 GOL sing 201 n n 
#
_atom_sites.entry_id                     4IBG 
_atom_sites.fract_transf_matrix[1][1]    0.019427 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015166 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013797 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 1D6 A 1 401 1 1D6 1D6 . 
D 3 SO4 A 1 402 2 SO4 SO4 . 
E 3 SO4 A 1 403 3 SO4 SO4 . 
F 3 SO4 A 1 404 5 SO4 SO4 . 
G 4 GOL A 1 405 1 GOL GOL . 
H 2 1D6 B 1 401 1 1D6 1D6 . 
I 3 SO4 B 1 402 4 SO4 SO4 . 
J 4 GOL B 1 403 1 GOL GOL . 
K 4 GOL B 1 404 1 GOL GOL . 
L 5 PO4 B 1 405 1 PO4 PO4 . 
M 6 HOH A 1 501 2 HOH HOH . 
M 6 HOH A 2 502 3 HOH HOH . 
M 6 HOH A 3 503 5 HOH HOH . 
M 6 HOH A 4 504 6 HOH HOH . 
M 6 HOH A 5 505 9 HOH HOH . 
M 6 HOH A 6 506 13 HOH HOH . 
M 6 HOH A 7 507 15 HOH HOH . 
M 6 HOH A 8 508 16 HOH HOH . 
M 6 HOH A 9 509 17 HOH HOH . 
M 6 HOH A 10 510 18 HOH HOH . 
M 6 HOH A 11 511 20 HOH HOH . 
M 6 HOH A 12 512 21 HOH HOH . 
M 6 HOH A 13 513 22 HOH HOH . 
M 6 HOH A 14 514 24 HOH HOH . 
M 6 HOH A 15 515 27 HOH HOH . 
M 6 HOH A 16 516 29 HOH HOH . 
M 6 HOH A 17 517 30 HOH HOH . 
M 6 HOH A 18 518 33 HOH HOH . 
M 6 HOH A 19 519 34 HOH HOH . 
M 6 HOH A 20 520 35 HOH HOH . 
M 6 HOH A 21 521 36 HOH HOH . 
M 6 HOH A 22 522 39 HOH HOH . 
M 6 HOH A 23 523 42 HOH HOH . 
M 6 HOH A 24 524 46 HOH HOH . 
M 6 HOH A 25 525 47 HOH HOH . 
M 6 HOH A 26 526 49 HOH HOH . 
M 6 HOH A 27 527 50 HOH HOH . 
M 6 HOH A 28 528 52 HOH HOH . 
M 6 HOH A 29 529 55 HOH HOH . 
M 6 HOH A 30 530 58 HOH HOH . 
M 6 HOH A 31 531 63 HOH HOH . 
M 6 HOH A 32 532 65 HOH HOH . 
M 6 HOH A 33 533 66 HOH HOH . 
M 6 HOH A 34 534 71 HOH HOH . 
M 6 HOH A 35 535 72 HOH HOH . 
M 6 HOH A 36 536 73 HOH HOH . 
M 6 HOH A 37 537 74 HOH HOH . 
M 6 HOH A 38 538 76 HOH HOH . 
M 6 HOH A 39 539 78 HOH HOH . 
M 6 HOH A 40 540 80 HOH HOH . 
M 6 HOH A 41 541 81 HOH HOH . 
M 6 HOH A 42 542 82 HOH HOH . 
M 6 HOH A 43 543 83 HOH HOH . 
M 6 HOH A 44 544 84 HOH HOH . 
M 6 HOH A 45 545 86 HOH HOH . 
M 6 HOH A 46 546 87 HOH HOH . 
M 6 HOH A 47 547 90 HOH HOH . 
M 6 HOH A 48 548 92 HOH HOH . 
M 6 HOH A 49 549 94 HOH HOH . 
M 6 HOH A 50 550 96 HOH HOH . 
M 6 HOH A 51 551 98 HOH HOH . 
M 6 HOH A 52 552 99 HOH HOH . 
M 6 HOH A 53 553 101 HOH HOH . 
M 6 HOH A 54 554 107 HOH HOH . 
M 6 HOH A 55 555 110 HOH HOH . 
M 6 HOH A 56 556 113 HOH HOH . 
M 6 HOH A 57 557 116 HOH HOH . 
M 6 HOH A 58 558 117 HOH HOH . 
M 6 HOH A 59 559 118 HOH HOH . 
M 6 HOH A 60 560 119 HOH HOH . 
M 6 HOH A 61 561 120 HOH HOH . 
M 6 HOH A 62 562 123 HOH HOH . 
M 6 HOH A 63 563 124 HOH HOH . 
M 6 HOH A 64 564 125 HOH HOH . 
M 6 HOH A 65 565 126 HOH HOH . 
M 6 HOH A 66 566 129 HOH HOH . 
M 6 HOH A 67 567 130 HOH HOH . 
M 6 HOH A 68 568 131 HOH HOH . 
M 6 HOH A 69 569 137 HOH HOH . 
M 6 HOH A 70 570 138 HOH HOH . 
M 6 HOH A 71 571 139 HOH HOH . 
M 6 HOH A 72 572 140 HOH HOH . 
M 6 HOH A 73 573 141 HOH HOH . 
M 6 HOH A 74 574 142 HOH HOH . 
M 6 HOH A 75 575 143 HOH HOH . 
M 6 HOH A 76 576 145 HOH HOH . 
M 6 HOH A 77 577 149 HOH HOH . 
M 6 HOH A 78 578 152 HOH HOH . 
M 6 HOH A 79 579 158 HOH HOH . 
M 6 HOH A 80 580 160 HOH HOH . 
M 6 HOH A 81 581 161 HOH HOH . 
M 6 HOH A 82 582 162 HOH HOH . 
M 6 HOH A 83 583 163 HOH HOH . 
M 6 HOH A 84 584 164 HOH HOH . 
M 6 HOH A 85 585 166 HOH HOH . 
M 6 HOH A 86 586 167 HOH HOH . 
M 6 HOH A 87 587 169 HOH HOH . 
M 6 HOH A 88 588 170 HOH HOH . 
M 6 HOH A 89 589 171 HOH HOH . 
M 6 HOH A 90 590 172 HOH HOH . 
M 6 HOH A 91 591 2 HOH HOH . 
M 6 HOH A 92 592 5 HOH HOH . 
M 6 HOH A 93 593 6 HOH HOH . 
M 6 HOH A 94 594 8 HOH HOH . 
M 6 HOH A 95 595 9 HOH HOH . 
M 6 HOH A 96 596 10 HOH HOH . 
M 6 HOH A 97 597 11 HOH HOH . 
M 6 HOH A 98 598 13 HOH HOH . 
M 6 HOH A 99 599 19 HOH HOH . 
M 6 HOH A 100 600 20 HOH HOH . 
M 6 HOH A 101 601 21 HOH HOH . 
M 6 HOH A 102 602 23 HOH HOH . 
M 6 HOH A 103 603 24 HOH HOH . 
M 6 HOH A 104 604 27 HOH HOH . 
M 6 HOH A 105 605 29 HOH HOH . 
M 6 HOH A 106 606 32 HOH HOH . 
M 6 HOH A 107 607 35 HOH HOH . 
M 6 HOH A 108 608 36 HOH HOH . 
M 6 HOH A 109 609 39 HOH HOH . 
M 6 HOH A 110 610 41 HOH HOH . 
N 6 HOH B 1 501 1 HOH HOH . 
N 6 HOH B 2 502 4 HOH HOH . 
N 6 HOH B 3 503 7 HOH HOH . 
N 6 HOH B 4 504 8 HOH HOH . 
N 6 HOH B 5 505 10 HOH HOH . 
N 6 HOH B 6 506 11 HOH HOH . 
N 6 HOH B 7 507 12 HOH HOH . 
N 6 HOH B 8 508 14 HOH HOH . 
N 6 HOH B 9 509 19 HOH HOH . 
N 6 HOH B 10 510 23 HOH HOH . 
N 6 HOH B 11 511 25 HOH HOH . 
N 6 HOH B 12 512 26 HOH HOH . 
N 6 HOH B 13 513 28 HOH HOH . 
N 6 HOH B 14 514 31 HOH HOH . 
N 6 HOH B 15 515 32 HOH HOH . 
N 6 HOH B 16 516 37 HOH HOH . 
N 6 HOH B 17 517 38 HOH HOH . 
N 6 HOH B 18 518 40 HOH HOH . 
N 6 HOH B 19 519 41 HOH HOH . 
N 6 HOH B 20 520 43 HOH HOH . 
N 6 HOH B 21 521 44 HOH HOH . 
N 6 HOH B 22 522 45 HOH HOH . 
N 6 HOH B 23 523 48 HOH HOH . 
N 6 HOH B 24 524 51 HOH HOH . 
N 6 HOH B 25 525 53 HOH HOH . 
N 6 HOH B 26 526 54 HOH HOH . 
N 6 HOH B 27 527 56 HOH HOH . 
N 6 HOH B 28 528 57 HOH HOH . 
N 6 HOH B 29 529 59 HOH HOH . 
N 6 HOH B 30 530 60 HOH HOH . 
N 6 HOH B 31 531 61 HOH HOH . 
N 6 HOH B 32 532 62 HOH HOH . 
N 6 HOH B 33 533 64 HOH HOH . 
N 6 HOH B 34 534 67 HOH HOH . 
N 6 HOH B 35 535 68 HOH HOH . 
N 6 HOH B 36 536 69 HOH HOH . 
N 6 HOH B 37 537 70 HOH HOH . 
N 6 HOH B 38 538 75 HOH HOH . 
N 6 HOH B 39 539 77 HOH HOH . 
N 6 HOH B 40 540 79 HOH HOH . 
N 6 HOH B 41 541 85 HOH HOH . 
N 6 HOH B 42 542 88 HOH HOH . 
N 6 HOH B 43 543 89 HOH HOH . 
N 6 HOH B 44 544 91 HOH HOH . 
N 6 HOH B 45 545 93 HOH HOH . 
N 6 HOH B 46 546 95 HOH HOH . 
N 6 HOH B 47 547 97 HOH HOH . 
N 6 HOH B 48 548 100 HOH HOH . 
N 6 HOH B 49 549 102 HOH HOH . 
N 6 HOH B 50 550 103 HOH HOH . 
N 6 HOH B 51 551 104 HOH HOH . 
N 6 HOH B 52 552 105 HOH HOH . 
N 6 HOH B 53 553 106 HOH HOH . 
N 6 HOH B 54 554 108 HOH HOH . 
N 6 HOH B 55 555 109 HOH HOH . 
N 6 HOH B 56 556 111 HOH HOH . 
N 6 HOH B 57 557 112 HOH HOH . 
N 6 HOH B 58 558 114 HOH HOH . 
N 6 HOH B 59 559 115 HOH HOH . 
N 6 HOH B 60 560 121 HOH HOH . 
N 6 HOH B 61 561 122 HOH HOH . 
N 6 HOH B 62 562 127 HOH HOH . 
N 6 HOH B 63 563 128 HOH HOH . 
N 6 HOH B 64 564 132 HOH HOH . 
N 6 HOH B 65 565 133 HOH HOH . 
N 6 HOH B 66 566 134 HOH HOH . 
N 6 HOH B 67 567 135 HOH HOH . 
N 6 HOH B 68 568 136 HOH HOH . 
N 6 HOH B 69 569 144 HOH HOH . 
N 6 HOH B 70 570 146 HOH HOH . 
N 6 HOH B 71 571 147 HOH HOH . 
N 6 HOH B 72 572 148 HOH HOH . 
N 6 HOH B 73 573 150 HOH HOH . 
N 6 HOH B 74 574 151 HOH HOH . 
N 6 HOH B 75 575 153 HOH HOH . 
N 6 HOH B 76 576 154 HOH HOH . 
N 6 HOH B 77 577 155 HOH HOH . 
N 6 HOH B 78 578 156 HOH HOH . 
N 6 HOH B 79 579 157 HOH HOH . 
N 6 HOH B 80 580 159 HOH HOH . 
N 6 HOH B 81 581 165 HOH HOH . 
N 6 HOH B 82 582 168 HOH HOH . 
N 6 HOH B 83 583 1 HOH HOH . 
N 6 HOH B 84 584 3 HOH HOH . 
N 6 HOH B 85 585 4 HOH HOH . 
N 6 HOH B 86 586 7 HOH HOH . 
N 6 HOH B 87 587 12 HOH HOH . 
N 6 HOH B 88 588 14 HOH HOH . 
N 6 HOH B 89 589 15 HOH HOH . 
N 6 HOH B 90 590 16 HOH HOH . 
N 6 HOH B 91 591 17 HOH HOH . 
N 6 HOH B 92 592 18 HOH HOH . 
N 6 HOH B 93 593 22 HOH HOH . 
N 6 HOH B 94 594 25 HOH HOH . 
N 6 HOH B 95 595 26 HOH HOH . 
N 6 HOH B 96 596 28 HOH HOH . 
N 6 HOH B 97 597 30 HOH HOH . 
N 6 HOH B 98 598 31 HOH HOH . 
N 6 HOH B 99 599 33 HOH HOH . 
N 6 HOH B 100 600 34 HOH HOH . 
N 6 HOH B 101 601 37 HOH HOH . 
N 6 HOH B 102 602 38 HOH HOH . 
N 6 HOH B 103 603 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 4 -3.568 29.01 8.826 1 36.62 ? C1 GOL 405 A 1 
HETATM 2 O O1 GOL . . . G 4 -3.694 30.407 8.946 1 36.69 ? O1 GOL 405 A 1 
HETATM 3 C C2 GOL . . . G 4 -2.325 28.665 8.004 1 19.89 ? C2 GOL 405 A 1 
HETATM 4 O O2 GOL . . . G 4 -1.182 29.224 8.604 1 19.48 ? O2 GOL 405 A 1 
HETATM 5 C C3 GOL . . . G 4 -2.171 27.15 7.948 1 43.11 ? C3 GOL 405 A 1 
HETATM 6 O O3 GOL . . . G 4 -1.331 26.779 6.884 1 31.85 ? O3 GOL 405 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           440 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#