data_4IBX # _model_server_result.job_id Tyk-bVuGvSdcHLamqGh8vA _model_server_result.datetime_utc '2024-10-19 11:37:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ibx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":302}' # _entry.id 4IBX # _exptl.entry_id 4IBX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IBX _cell.length_a 39.9 _cell.length_b 239 _cell.length_c 159.91 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IBX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F,G,L 1 1 B,H,M 2 1 C,I,J,N 3 1 D,K,O 4 1 E,P 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 77 1_555 A SG CYS 98 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 B SG CYS 52 B CYS 77 1_555 B SG CYS 98 B CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 C SG CYS 52 C CYS 77 1_555 C SG CYS 98 C CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 D SG CYS 52 D CYS 77 1_555 D SG CYS 98 D CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 E SG CYS 52 E CYS 77 1_555 E SG CYS 98 E CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 F CA CA . A CA 301 1_555 L O HOH . A HOH 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc2 F CA CA . A CA 301 1_555 M O HOH . B HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc3 F CA CA . A CA 301 1_555 M O HOH . B HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc4 F CA CA . A CA 301 1_555 M O HOH . B HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc5 I CA CA . C CA 301 1_555 N O HOH . C HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 218 n n O1 C6 MES sing 219 n n C2 C3 MES sing 220 n n C2 H21 MES sing 221 n n C2 H22 MES sing 222 n n C3 N4 MES sing 223 n n C3 H31 MES sing 224 n n C3 H32 MES sing 225 n n N4 C5 MES sing 226 n n N4 C7 MES sing 227 n n N4 HN4 MES sing 228 n n C5 C6 MES sing 229 n n C5 H51 MES sing 230 n n C5 H52 MES sing 231 n n C6 H61 MES sing 232 n n C6 H62 MES sing 233 n n C7 C8 MES sing 234 n n C7 H71 MES sing 235 n n C7 H72 MES sing 236 n n C8 S MES sing 237 n n C8 H81 MES sing 238 n n C8 H82 MES sing 239 n n S O1S MES doub 240 n n S O2S MES doub 241 n n S O3S MES sing 242 n n # _atom_sites.entry_id 4IBX _atom_sites.fract_transf_matrix[1][1] 0.025063 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006254 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CA A 1 301 1 CA CA . G 3 MES A 1 302 1 MES MES . H 3 MES B 1 301 1 MES MES . I 2 CA C 1 301 1 CA CA . J 4 SO4 C 1 302 1 SO4 SO4 . K 3 MES D 1 301 1 MES MES . L 5 HOH A 1 401 6 HOH HOH . L 5 HOH A 2 402 11 HOH HOH . L 5 HOH A 3 403 12 HOH HOH . L 5 HOH A 4 404 13 HOH HOH . L 5 HOH A 5 405 16 HOH HOH . L 5 HOH A 6 406 17 HOH HOH . L 5 HOH A 7 407 26 HOH HOH . L 5 HOH A 8 408 27 HOH HOH . L 5 HOH A 9 409 29 HOH HOH . L 5 HOH A 10 410 30 HOH HOH . L 5 HOH A 11 411 34 HOH HOH . L 5 HOH A 12 412 35 HOH HOH . L 5 HOH A 13 413 36 HOH HOH . L 5 HOH A 14 414 38 HOH HOH . L 5 HOH A 15 415 40 HOH HOH . L 5 HOH A 16 416 41 HOH HOH . L 5 HOH A 17 417 43 HOH HOH . L 5 HOH A 18 418 47 HOH HOH . L 5 HOH A 19 419 52 HOH HOH . L 5 HOH A 20 420 55 HOH HOH . L 5 HOH A 21 421 56 HOH HOH . L 5 HOH A 22 422 58 HOH HOH . L 5 HOH A 23 423 59 HOH HOH . L 5 HOH A 24 424 71 HOH HOH . L 5 HOH A 25 425 75 HOH HOH . L 5 HOH A 26 426 76 HOH HOH . L 5 HOH A 27 427 80 HOH HOH . L 5 HOH A 28 428 82 HOH HOH . L 5 HOH A 29 429 83 HOH HOH . L 5 HOH A 30 430 85 HOH HOH . L 5 HOH A 31 431 88 HOH HOH . L 5 HOH A 32 432 91 HOH HOH . L 5 HOH A 33 433 101 HOH HOH . L 5 HOH A 34 434 108 HOH HOH . M 5 HOH B 1 401 2 HOH HOH . M 5 HOH B 2 402 4 HOH HOH . M 5 HOH B 3 403 9 HOH HOH . M 5 HOH B 4 404 14 HOH HOH . M 5 HOH B 5 405 19 HOH HOH . M 5 HOH B 6 406 22 HOH HOH . M 5 HOH B 7 407 23 HOH HOH . M 5 HOH B 8 408 24 HOH HOH . M 5 HOH B 9 409 32 HOH HOH . M 5 HOH B 10 410 33 HOH HOH . M 5 HOH B 11 411 39 HOH HOH . M 5 HOH B 12 412 44 HOH HOH . M 5 HOH B 13 413 48 HOH HOH . M 5 HOH B 14 414 49 HOH HOH . M 5 HOH B 15 415 60 HOH HOH . M 5 HOH B 16 416 62 HOH HOH . M 5 HOH B 17 417 64 HOH HOH . M 5 HOH B 18 418 66 HOH HOH . M 5 HOH B 19 419 70 HOH HOH . M 5 HOH B 20 420 73 HOH HOH . M 5 HOH B 21 421 78 HOH HOH . M 5 HOH B 22 422 79 HOH HOH . M 5 HOH B 23 423 81 HOH HOH . M 5 HOH B 24 424 86 HOH HOH . M 5 HOH B 25 425 92 HOH HOH . M 5 HOH B 26 426 96 HOH HOH . M 5 HOH B 27 427 99 HOH HOH . M 5 HOH B 28 428 100 HOH HOH . M 5 HOH B 29 429 104 HOH HOH . M 5 HOH B 30 430 105 HOH HOH . N 5 HOH C 1 401 18 HOH HOH . N 5 HOH C 2 402 25 HOH HOH . N 5 HOH C 3 403 37 HOH HOH . N 5 HOH C 4 404 42 HOH HOH . N 5 HOH C 5 405 53 HOH HOH . N 5 HOH C 6 406 63 HOH HOH . N 5 HOH C 7 407 69 HOH HOH . N 5 HOH C 8 408 87 HOH HOH . N 5 HOH C 9 409 97 HOH HOH . N 5 HOH C 10 410 98 HOH HOH . N 5 HOH C 11 411 102 HOH HOH . O 5 HOH D 1 401 5 HOH HOH . O 5 HOH D 2 402 20 HOH HOH . O 5 HOH D 3 403 31 HOH HOH . O 5 HOH D 4 404 46 HOH HOH . O 5 HOH D 5 405 61 HOH HOH . O 5 HOH D 6 406 72 HOH HOH . O 5 HOH D 7 407 77 HOH HOH . O 5 HOH D 8 408 93 HOH HOH . O 5 HOH D 9 409 103 HOH HOH . O 5 HOH D 10 410 106 HOH HOH . P 5 HOH E 1 301 8 HOH HOH . P 5 HOH E 2 302 10 HOH HOH . P 5 HOH E 3 303 28 HOH HOH . P 5 HOH E 4 304 50 HOH HOH . P 5 HOH E 5 305 54 HOH HOH . P 5 HOH E 6 306 67 HOH HOH . P 5 HOH E 7 307 74 HOH HOH . P 5 HOH E 8 308 89 HOH HOH . P 5 HOH E 9 309 94 HOH HOH . P 5 HOH E 10 310 95 HOH HOH . P 5 HOH E 11 311 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . G 3 0.575 -58.96 -30.208 0.8 60.13 ? O1 MES 302 A 1 HETATM 2 C C2 MES . . . G 3 0.894 -58.288 -28.992 0.8 59.89 ? C2 MES 302 A 1 HETATM 3 C C3 MES . . . G 3 2.261 -57.623 -29.112 0.8 59.77 ? C3 MES 302 A 1 HETATM 4 N N4 MES . . . G 3 2.775 -58.036 -30.41 0.8 60.4 ? N4 MES 302 A 1 HETATM 5 C C5 MES . . . G 3 2.048 -57.694 -31.623 0.8 61.16 ? C5 MES 302 A 1 HETATM 6 C C6 MES . . . G 3 0.603 -58.079 -31.328 0.8 60.03 ? C6 MES 302 A 1 HETATM 7 C C7 MES . . . G 3 4.017 -58.789 -30.493 0.8 59.49 ? C7 MES 302 A 1 HETATM 8 C C8 MES . . . G 3 4.287 -59.263 -29.07 0.8 57.48 ? C8 MES 302 A 1 HETATM 9 S S MES . . . G 3 5.817 -58.811 -28.602 0.8 55.25 ? S MES 302 A 1 HETATM 10 O O1S MES . . . G 3 6.74 -58.902 -29.755 0.8 53.54 ? O1S MES 302 A 1 HETATM 11 O O2S MES . . . G 3 5.793 -57.418 -28.1 0.8 52.44 ? O2S MES 302 A 1 HETATM 12 O O3S MES . . . G 3 6.283 -59.717 -27.529 0.8 56.28 ? O3S MES 302 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #