data_4IGD
#
_model_server_result.job_id            XyWsSUSWwYnKIEIDqKh--g 
_model_server_result.datetime_utc      '2025-02-05 13:52:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4igd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":702}' 
#
_entry.id    4IGD 
#
_exptl.entry_id    4IGD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4IGD 
_cell.length_a            63.31 
_cell.length_b            69.61 
_cell.length_c            117.68 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IGD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 8 A CYS 301 1_555 A SG CYS 56 A CYS 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 A SG CYS 36 A CYS 329 1_555 A SG CYS 69 A CYS 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 A SG CYS 74 A CYS 367 1_555 A SG CYS 121 A CYS 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 104 A CYS 397 1_555 A SG CYS 139 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf5 A SG CYS 143 A CYS 436 1_555 A SG CYS 279 A CYS 572 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf6 A SG CYS 182 A CYS 475 1_555 A SG CYS 198 A CYS 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 A SG CYS 321 A CYS 614 1_555 A SG CYS 338 A CYS 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf8 A SG CYS 349 A CYS 642 1_555 A SG CYS 379 A CYS 672 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4IGD 
_atom_sites.fract_transf_matrix[1][1]    0.015795 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014366 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008498 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 701 1 GOL GOL . 
C 2 GOL A 1 702 2 GOL GOL . 
D 3 HOH A 1 801 1 HOH HOH . 
D 3 HOH A 2 802 2 HOH HOH . 
D 3 HOH A 3 803 3 HOH HOH . 
D 3 HOH A 4 804 4 HOH HOH . 
D 3 HOH A 5 805 5 HOH HOH . 
D 3 HOH A 6 806 6 HOH HOH . 
D 3 HOH A 7 807 7 HOH HOH . 
D 3 HOH A 8 808 8 HOH HOH . 
D 3 HOH A 9 809 9 HOH HOH . 
D 3 HOH A 10 810 10 HOH HOH . 
D 3 HOH A 11 811 11 HOH HOH . 
D 3 HOH A 12 812 12 HOH HOH . 
D 3 HOH A 13 813 13 HOH HOH . 
D 3 HOH A 14 814 14 HOH HOH . 
D 3 HOH A 15 815 15 HOH HOH . 
D 3 HOH A 16 816 16 HOH HOH . 
D 3 HOH A 17 817 17 HOH HOH . 
D 3 HOH A 18 818 18 HOH HOH . 
D 3 HOH A 19 819 19 HOH HOH . 
D 3 HOH A 20 820 20 HOH HOH . 
D 3 HOH A 21 821 21 HOH HOH . 
D 3 HOH A 22 822 22 HOH HOH . 
D 3 HOH A 23 823 23 HOH HOH . 
D 3 HOH A 24 824 24 HOH HOH . 
D 3 HOH A 25 825 25 HOH HOH . 
D 3 HOH A 26 826 26 HOH HOH . 
D 3 HOH A 27 827 27 HOH HOH . 
D 3 HOH A 28 828 28 HOH HOH . 
D 3 HOH A 29 829 32 HOH HOH . 
D 3 HOH A 30 830 34 HOH HOH . 
D 3 HOH A 31 831 35 HOH HOH . 
D 3 HOH A 32 832 36 HOH HOH . 
D 3 HOH A 33 833 37 HOH HOH . 
D 3 HOH A 34 834 38 HOH HOH . 
D 3 HOH A 35 835 39 HOH HOH . 
D 3 HOH A 36 836 41 HOH HOH . 
D 3 HOH A 37 837 42 HOH HOH . 
D 3 HOH A 38 838 43 HOH HOH . 
D 3 HOH A 39 839 44 HOH HOH . 
D 3 HOH A 40 840 46 HOH HOH . 
D 3 HOH A 41 841 47 HOH HOH . 
D 3 HOH A 42 842 48 HOH HOH . 
D 3 HOH A 43 843 49 HOH HOH . 
D 3 HOH A 44 844 50 HOH HOH . 
D 3 HOH A 45 845 51 HOH HOH . 
D 3 HOH A 46 846 52 HOH HOH . 
D 3 HOH A 47 847 53 HOH HOH . 
D 3 HOH A 48 848 54 HOH HOH . 
D 3 HOH A 49 849 55 HOH HOH . 
D 3 HOH A 50 850 57 HOH HOH . 
D 3 HOH A 51 851 58 HOH HOH . 
D 3 HOH A 52 852 59 HOH HOH . 
D 3 HOH A 53 853 60 HOH HOH . 
D 3 HOH A 54 854 62 HOH HOH . 
D 3 HOH A 55 855 63 HOH HOH . 
D 3 HOH A 56 856 64 HOH HOH . 
D 3 HOH A 57 857 65 HOH HOH . 
D 3 HOH A 58 858 66 HOH HOH . 
D 3 HOH A 59 859 67 HOH HOH . 
D 3 HOH A 60 860 68 HOH HOH . 
D 3 HOH A 61 861 69 HOH HOH . 
D 3 HOH A 62 862 70 HOH HOH . 
D 3 HOH A 63 863 72 HOH HOH . 
D 3 HOH A 64 864 73 HOH HOH . 
D 3 HOH A 65 865 75 HOH HOH . 
D 3 HOH A 66 866 76 HOH HOH . 
D 3 HOH A 67 867 78 HOH HOH . 
D 3 HOH A 68 868 79 HOH HOH . 
D 3 HOH A 69 869 81 HOH HOH . 
D 3 HOH A 70 870 82 HOH HOH . 
D 3 HOH A 71 871 83 HOH HOH . 
D 3 HOH A 72 872 84 HOH HOH . 
D 3 HOH A 73 873 85 HOH HOH . 
D 3 HOH A 74 874 86 HOH HOH . 
D 3 HOH A 75 875 87 HOH HOH . 
D 3 HOH A 76 876 88 HOH HOH . 
D 3 HOH A 77 877 90 HOH HOH . 
D 3 HOH A 78 878 91 HOH HOH . 
D 3 HOH A 79 879 95 HOH HOH . 
D 3 HOH A 80 880 96 HOH HOH . 
D 3 HOH A 81 881 98 HOH HOH . 
D 3 HOH A 82 882 99 HOH HOH . 
D 3 HOH A 83 883 100 HOH HOH . 
D 3 HOH A 84 884 101 HOH HOH . 
D 3 HOH A 85 885 102 HOH HOH . 
D 3 HOH A 86 886 103 HOH HOH . 
D 3 HOH A 87 887 104 HOH HOH . 
D 3 HOH A 88 888 105 HOH HOH . 
D 3 HOH A 89 889 106 HOH HOH . 
D 3 HOH A 90 890 107 HOH HOH . 
D 3 HOH A 91 891 108 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 31.422 13.228 -12.647 1 57.28 ? C1 GOL 702 A 1 
HETATM 2 O O1 GOL . . . C 2 32.186 14.166 -11.921 1 58.24 ? O1 GOL 702 A 1 
HETATM 3 C C2 GOL . . . C 2 30.112 12.967 -11.916 1 53.42 ? C2 GOL 702 A 1 
HETATM 4 O O2 GOL . . . C 2 29.86 14.041 -11.039 1 50.79 ? O2 GOL 702 A 1 
HETATM 5 C C3 GOL . . . C 2 28.974 12.859 -12.926 1 52.23 ? C3 GOL 702 A 1 
HETATM 6 O O3 GOL . . . C 2 29.348 12.009 -13.988 1 52.19 ? O3 GOL 702 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           6 
#