data_4IGH # _model_server_result.job_id 4YamqF8eYaZ1sNr4t8OXDA _model_server_result.datetime_utc '2024-11-07 23:41:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4igh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 4IGH # _exptl.entry_id 4IGH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.096 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OROTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4IGH _cell.length_a 90.786 _cell.length_b 90.786 _cell.length_c 122.485 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IGH _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H4 N2 O4' _chem_comp.formula_weight 156.096 _chem_comp.id ORO _chem_comp.mon_nstd_flag . _chem_comp.name 'OROTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 ORO sing 347 n y N1 C6 ORO sing 348 n y N1 HN1 ORO sing 349 n n C2 O2 ORO doub 350 n n C2 N3 ORO sing 351 n y N3 C4 ORO sing 352 n y N3 HN3 ORO sing 353 n n C4 O4 ORO doub 354 n n C4 C5 ORO sing 355 n y C5 C6 ORO doub 356 n y C5 H5 ORO sing 357 n n C6 C7 ORO sing 358 n n C7 O71 ORO doub 359 n n C7 O72 ORO sing 360 n n O72 HO7 ORO sing 361 n n # _atom_sites.entry_id 4IGH _atom_sites.fract_transf_matrix[1][1] 0.011015 _atom_sites.fract_transf_matrix[1][2] 0.006359 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008164 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 501 500 FMN FMN . C 3 ORO A 1 502 501 ORO ORO . D 4 1EA A 1 503 502 1EA 1EA . E 5 ZWI A 1 504 503 ZWI ZWI . F 6 GOL A 1 505 1001 GOL GOL . G 6 GOL A 1 506 1003 GOL GOL . H 7 HOH A 1 601 1 HOH HOH . H 7 HOH A 2 602 2 HOH HOH . H 7 HOH A 3 603 3 HOH HOH . H 7 HOH A 4 604 4 HOH HOH . H 7 HOH A 5 605 5 HOH HOH . H 7 HOH A 6 606 6 HOH HOH . H 7 HOH A 7 607 7 HOH HOH . H 7 HOH A 8 608 8 HOH HOH . H 7 HOH A 9 609 9 HOH HOH . H 7 HOH A 10 610 10 HOH HOH . H 7 HOH A 11 611 11 HOH HOH . H 7 HOH A 12 612 12 HOH HOH . H 7 HOH A 13 613 13 HOH HOH . H 7 HOH A 14 614 14 HOH HOH . H 7 HOH A 15 615 15 HOH HOH . H 7 HOH A 16 616 16 HOH HOH . H 7 HOH A 17 617 17 HOH HOH . H 7 HOH A 18 618 18 HOH HOH . H 7 HOH A 19 619 19 HOH HOH . H 7 HOH A 20 620 20 HOH HOH . H 7 HOH A 21 621 21 HOH HOH . H 7 HOH A 22 622 22 HOH HOH . H 7 HOH A 23 623 23 HOH HOH . H 7 HOH A 24 624 24 HOH HOH . H 7 HOH A 25 625 25 HOH HOH . H 7 HOH A 26 626 26 HOH HOH . H 7 HOH A 27 627 27 HOH HOH . H 7 HOH A 28 628 28 HOH HOH . H 7 HOH A 29 629 29 HOH HOH . H 7 HOH A 30 630 30 HOH HOH . H 7 HOH A 31 631 31 HOH HOH . H 7 HOH A 32 632 32 HOH HOH . H 7 HOH A 33 633 33 HOH HOH . H 7 HOH A 34 634 34 HOH HOH . H 7 HOH A 35 635 35 HOH HOH . H 7 HOH A 36 636 36 HOH HOH . H 7 HOH A 37 637 37 HOH HOH . H 7 HOH A 38 638 38 HOH HOH . H 7 HOH A 39 639 39 HOH HOH . H 7 HOH A 40 640 40 HOH HOH . H 7 HOH A 41 641 41 HOH HOH . H 7 HOH A 42 642 42 HOH HOH . H 7 HOH A 43 643 43 HOH HOH . H 7 HOH A 44 644 44 HOH HOH . H 7 HOH A 45 645 45 HOH HOH . H 7 HOH A 46 646 46 HOH HOH . H 7 HOH A 47 647 47 HOH HOH . H 7 HOH A 48 648 48 HOH HOH . H 7 HOH A 49 649 49 HOH HOH . H 7 HOH A 50 650 50 HOH HOH . H 7 HOH A 51 651 51 HOH HOH . H 7 HOH A 52 652 52 HOH HOH . H 7 HOH A 53 653 53 HOH HOH . H 7 HOH A 54 654 54 HOH HOH . H 7 HOH A 55 655 55 HOH HOH . H 7 HOH A 56 656 56 HOH HOH . H 7 HOH A 57 657 57 HOH HOH . H 7 HOH A 58 658 58 HOH HOH . H 7 HOH A 59 659 59 HOH HOH . H 7 HOH A 60 660 60 HOH HOH . H 7 HOH A 61 661 61 HOH HOH . H 7 HOH A 62 662 62 HOH HOH . H 7 HOH A 63 663 63 HOH HOH . H 7 HOH A 64 664 64 HOH HOH . H 7 HOH A 65 665 65 HOH HOH . H 7 HOH A 66 666 66 HOH HOH . H 7 HOH A 67 667 67 HOH HOH . H 7 HOH A 68 668 68 HOH HOH . H 7 HOH A 69 669 69 HOH HOH . H 7 HOH A 70 670 70 HOH HOH . H 7 HOH A 71 671 71 HOH HOH . H 7 HOH A 72 672 72 HOH HOH . H 7 HOH A 73 673 73 HOH HOH . H 7 HOH A 74 674 74 HOH HOH . H 7 HOH A 75 675 75 HOH HOH . H 7 HOH A 76 676 76 HOH HOH . H 7 HOH A 77 677 77 HOH HOH . H 7 HOH A 78 678 78 HOH HOH . H 7 HOH A 79 679 79 HOH HOH . H 7 HOH A 80 680 80 HOH HOH . H 7 HOH A 81 681 81 HOH HOH . H 7 HOH A 82 682 82 HOH HOH . H 7 HOH A 83 683 83 HOH HOH . H 7 HOH A 84 684 84 HOH HOH . H 7 HOH A 85 685 85 HOH HOH . H 7 HOH A 86 686 86 HOH HOH . H 7 HOH A 87 687 87 HOH HOH . H 7 HOH A 88 688 88 HOH HOH . H 7 HOH A 89 689 89 HOH HOH . H 7 HOH A 90 690 90 HOH HOH . H 7 HOH A 91 691 91 HOH HOH . H 7 HOH A 92 692 92 HOH HOH . H 7 HOH A 93 693 93 HOH HOH . H 7 HOH A 94 694 94 HOH HOH . H 7 HOH A 95 695 95 HOH HOH . H 7 HOH A 96 696 96 HOH HOH . H 7 HOH A 97 697 97 HOH HOH . H 7 HOH A 98 698 98 HOH HOH . H 7 HOH A 99 699 99 HOH HOH . H 7 HOH A 100 700 100 HOH HOH . H 7 HOH A 101 701 101 HOH HOH . H 7 HOH A 102 702 102 HOH HOH . H 7 HOH A 103 703 103 HOH HOH . H 7 HOH A 104 704 104 HOH HOH . H 7 HOH A 105 705 105 HOH HOH . H 7 HOH A 106 706 106 HOH HOH . H 7 HOH A 107 707 107 HOH HOH . H 7 HOH A 108 708 108 HOH HOH . H 7 HOH A 109 709 109 HOH HOH . H 7 HOH A 110 710 110 HOH HOH . H 7 HOH A 111 711 111 HOH HOH . H 7 HOH A 112 712 112 HOH HOH . H 7 HOH A 113 713 113 HOH HOH . H 7 HOH A 114 714 114 HOH HOH . H 7 HOH A 115 715 115 HOH HOH . H 7 HOH A 116 716 116 HOH HOH . H 7 HOH A 117 717 117 HOH HOH . H 7 HOH A 118 718 118 HOH HOH . H 7 HOH A 119 719 119 HOH HOH . H 7 HOH A 120 720 120 HOH HOH . H 7 HOH A 121 721 121 HOH HOH . H 7 HOH A 122 722 122 HOH HOH . H 7 HOH A 123 723 123 HOH HOH . H 7 HOH A 124 724 124 HOH HOH . H 7 HOH A 125 725 125 HOH HOH . H 7 HOH A 126 726 126 HOH HOH . H 7 HOH A 127 727 127 HOH HOH . H 7 HOH A 128 728 128 HOH HOH . H 7 HOH A 129 729 129 HOH HOH . H 7 HOH A 130 730 130 HOH HOH . H 7 HOH A 131 731 131 HOH HOH . H 7 HOH A 132 732 132 HOH HOH . H 7 HOH A 133 733 133 HOH HOH . H 7 HOH A 134 734 134 HOH HOH . H 7 HOH A 135 735 135 HOH HOH . H 7 HOH A 136 736 136 HOH HOH . H 7 HOH A 137 737 137 HOH HOH . H 7 HOH A 138 738 138 HOH HOH . H 7 HOH A 139 739 139 HOH HOH . H 7 HOH A 140 740 140 HOH HOH . H 7 HOH A 141 741 141 HOH HOH . H 7 HOH A 142 742 142 HOH HOH . H 7 HOH A 143 743 143 HOH HOH . H 7 HOH A 144 744 144 HOH HOH . H 7 HOH A 145 745 145 HOH HOH . H 7 HOH A 146 746 146 HOH HOH . H 7 HOH A 147 747 147 HOH HOH . H 7 HOH A 148 748 148 HOH HOH . H 7 HOH A 149 749 149 HOH HOH . H 7 HOH A 150 750 150 HOH HOH . H 7 HOH A 151 751 151 HOH HOH . H 7 HOH A 152 752 152 HOH HOH . H 7 HOH A 153 753 153 HOH HOH . H 7 HOH A 154 754 154 HOH HOH . H 7 HOH A 155 755 155 HOH HOH . H 7 HOH A 156 756 156 HOH HOH . H 7 HOH A 157 757 157 HOH HOH . H 7 HOH A 158 758 158 HOH HOH . H 7 HOH A 159 759 159 HOH HOH . H 7 HOH A 160 760 160 HOH HOH . H 7 HOH A 161 761 161 HOH HOH . H 7 HOH A 162 762 162 HOH HOH . H 7 HOH A 163 763 163 HOH HOH . H 7 HOH A 164 764 164 HOH HOH . H 7 HOH A 165 765 165 HOH HOH . H 7 HOH A 166 766 166 HOH HOH . H 7 HOH A 167 767 167 HOH HOH . H 7 HOH A 168 768 168 HOH HOH . H 7 HOH A 169 769 169 HOH HOH . H 7 HOH A 170 770 170 HOH HOH . H 7 HOH A 171 771 171 HOH HOH . H 7 HOH A 172 772 172 HOH HOH . H 7 HOH A 173 773 173 HOH HOH . H 7 HOH A 174 774 174 HOH HOH . H 7 HOH A 175 775 175 HOH HOH . H 7 HOH A 176 776 176 HOH HOH . H 7 HOH A 177 777 177 HOH HOH . H 7 HOH A 178 778 178 HOH HOH . H 7 HOH A 179 779 179 HOH HOH . H 7 HOH A 180 780 180 HOH HOH . H 7 HOH A 181 781 181 HOH HOH . H 7 HOH A 182 782 182 HOH HOH . H 7 HOH A 183 783 183 HOH HOH . H 7 HOH A 184 784 184 HOH HOH . H 7 HOH A 185 785 185 HOH HOH . H 7 HOH A 186 786 186 HOH HOH . H 7 HOH A 187 787 187 HOH HOH . H 7 HOH A 188 788 188 HOH HOH . H 7 HOH A 189 789 189 HOH HOH . H 7 HOH A 190 790 190 HOH HOH . H 7 HOH A 191 791 191 HOH HOH . H 7 HOH A 192 792 192 HOH HOH . H 7 HOH A 193 793 193 HOH HOH . H 7 HOH A 194 794 194 HOH HOH . H 7 HOH A 195 795 195 HOH HOH . H 7 HOH A 196 796 196 HOH HOH . H 7 HOH A 197 797 197 HOH HOH . H 7 HOH A 198 798 198 HOH HOH . H 7 HOH A 199 799 199 HOH HOH . H 7 HOH A 200 800 200 HOH HOH . H 7 HOH A 201 801 201 HOH HOH . H 7 HOH A 202 802 202 HOH HOH . H 7 HOH A 203 803 203 HOH HOH . H 7 HOH A 204 804 204 HOH HOH . H 7 HOH A 205 805 205 HOH HOH . H 7 HOH A 206 806 206 HOH HOH . H 7 HOH A 207 807 207 HOH HOH . H 7 HOH A 208 808 208 HOH HOH . H 7 HOH A 209 809 209 HOH HOH . H 7 HOH A 210 810 210 HOH HOH . H 7 HOH A 211 811 211 HOH HOH . H 7 HOH A 212 812 212 HOH HOH . H 7 HOH A 213 813 213 HOH HOH . H 7 HOH A 214 814 214 HOH HOH . H 7 HOH A 215 815 215 HOH HOH . H 7 HOH A 216 816 216 HOH HOH . H 7 HOH A 217 817 217 HOH HOH . H 7 HOH A 218 818 218 HOH HOH . H 7 HOH A 219 819 219 HOH HOH . H 7 HOH A 220 820 220 HOH HOH . H 7 HOH A 221 821 221 HOH HOH . H 7 HOH A 222 822 222 HOH HOH . H 7 HOH A 223 823 223 HOH HOH . H 7 HOH A 224 824 224 HOH HOH . H 7 HOH A 225 825 225 HOH HOH . H 7 HOH A 226 826 226 HOH HOH . H 7 HOH A 227 827 227 HOH HOH . H 7 HOH A 228 828 228 HOH HOH . H 7 HOH A 229 829 229 HOH HOH . H 7 HOH A 230 830 230 HOH HOH . H 7 HOH A 231 831 231 HOH HOH . H 7 HOH A 232 832 232 HOH HOH . H 7 HOH A 233 833 234 HOH HOH . H 7 HOH A 234 834 235 HOH HOH . H 7 HOH A 235 835 236 HOH HOH . H 7 HOH A 236 836 237 HOH HOH . H 7 HOH A 237 837 238 HOH HOH . H 7 HOH A 238 838 239 HOH HOH . H 7 HOH A 239 839 240 HOH HOH . H 7 HOH A 240 840 241 HOH HOH . H 7 HOH A 241 841 242 HOH HOH . H 7 HOH A 242 842 243 HOH HOH . H 7 HOH A 243 843 244 HOH HOH . H 7 HOH A 244 844 245 HOH HOH . H 7 HOH A 245 845 246 HOH HOH . H 7 HOH A 246 846 247 HOH HOH . H 7 HOH A 247 847 248 HOH HOH . H 7 HOH A 248 848 249 HOH HOH . H 7 HOH A 249 849 250 HOH HOH . H 7 HOH A 250 850 251 HOH HOH . H 7 HOH A 251 851 252 HOH HOH . H 7 HOH A 252 852 253 HOH HOH . H 7 HOH A 253 853 254 HOH HOH . H 7 HOH A 254 854 255 HOH HOH . H 7 HOH A 255 855 256 HOH HOH . H 7 HOH A 256 856 257 HOH HOH . H 7 HOH A 257 857 258 HOH HOH . H 7 HOH A 258 858 259 HOH HOH . H 7 HOH A 259 859 260 HOH HOH . H 7 HOH A 260 860 261 HOH HOH . H 7 HOH A 261 861 262 HOH HOH . H 7 HOH A 262 862 263 HOH HOH . H 7 HOH A 263 863 264 HOH HOH . H 7 HOH A 264 864 265 HOH HOH . H 7 HOH A 265 865 266 HOH HOH . H 7 HOH A 266 866 267 HOH HOH . H 7 HOH A 267 867 268 HOH HOH . H 7 HOH A 268 868 269 HOH HOH . H 7 HOH A 269 869 270 HOH HOH . H 7 HOH A 270 870 271 HOH HOH . H 7 HOH A 271 871 272 HOH HOH . H 7 HOH A 272 872 273 HOH HOH . H 7 HOH A 273 873 274 HOH HOH . H 7 HOH A 274 874 275 HOH HOH . H 7 HOH A 275 875 276 HOH HOH . H 7 HOH A 276 876 277 HOH HOH . H 7 HOH A 277 877 278 HOH HOH . H 7 HOH A 278 878 279 HOH HOH . H 7 HOH A 279 879 280 HOH HOH . H 7 HOH A 280 880 281 HOH HOH . H 7 HOH A 281 881 282 HOH HOH . H 7 HOH A 282 882 283 HOH HOH . H 7 HOH A 283 883 284 HOH HOH . H 7 HOH A 284 884 286 HOH HOH . H 7 HOH A 285 885 287 HOH HOH . H 7 HOH A 286 886 288 HOH HOH . H 7 HOH A 287 887 289 HOH HOH . H 7 HOH A 288 888 290 HOH HOH . H 7 HOH A 289 889 291 HOH HOH . H 7 HOH A 290 890 292 HOH HOH . H 7 HOH A 291 891 293 HOH HOH . H 7 HOH A 292 892 294 HOH HOH . H 7 HOH A 293 893 295 HOH HOH . H 7 HOH A 294 894 296 HOH HOH . H 7 HOH A 295 895 298 HOH HOH . H 7 HOH A 296 896 299 HOH HOH . H 7 HOH A 297 897 300 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ORO . . . C 3 3.099 46.402 6.93 1 11.71 ? N1 ORO 502 A 1 HETATM 2 C C2 ORO . . . C 3 4.071 45.545 7.349 1 9.08 ? C2 ORO 502 A 1 HETATM 3 O O2 ORO . . . C 3 4.464 45.431 8.517 1 9.68 ? O2 ORO 502 A 1 HETATM 4 N N3 ORO . . . C 3 4.738 44.842 6.415 1 8.22 ? N3 ORO 502 A 1 HETATM 5 C C4 ORO . . . C 3 4.444 44.913 5.108 1 9.06 ? C4 ORO 502 A 1 HETATM 6 O O4 ORO . . . C 3 5.056 44.288 4.264 1 9.86 ? O4 ORO 502 A 1 HETATM 7 C C5 ORO . . . C 3 3.474 45.804 4.72 1 7.31 ? C5 ORO 502 A 1 HETATM 8 C C6 ORO . . . C 3 2.767 46.526 5.663 1 10.26 ? C6 ORO 502 A 1 HETATM 9 C C7 ORO . . . C 3 1.802 47.547 5.165 1 11.92 ? C7 ORO 502 A 1 HETATM 10 O O71 ORO . . . C 3 2.228 48.13 4.181 1 12.45 ? O71 ORO 502 A 1 HETATM 11 O O72 ORO . . . C 3 0.737 47.742 5.705 1 12.44 ? O72 ORO 502 A 1 HETATM 12 H HN1 ORO . . . C 3 2.628 46.991 7.614 1 10.65 ? HN1 ORO 502 A 1 HETATM 13 H HN3 ORO . . . C 3 5.444 44.189 6.705 1 7.55 ? HN3 ORO 502 A 1 HETATM 14 H H5 ORO . . . C 3 3.235 45.909 3.697 1 7.39 ? H5 ORO 502 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 14 #