data_4IJ6 # _model_server_result.job_id HcQXY8O3YgcQlY9m2ZRLgQ _model_server_result.datetime_utc '2024-12-01 06:23:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ij6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":303}' # _entry.id 4IJ6 # _exptl.entry_id 4IJ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IJ6 _cell.length_a 49.33 _cell.length_b 68.92 _cell.length_c 123.55 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IJ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 198 A CYS 198 1_555 B SG CYS 198 B CYS 198 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 198 A CYS 198 1_555 B SG CYS 198 B CYS 198 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4IJ6 _atom_sites.fract_transf_matrix[1][1] 0.020272 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01451 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SEP A 1 301 1 SEP SEP . D 3 CL A 1 302 1 CL CL . E 4 EDO A 1 303 1 EDO EDO . F 4 EDO A 1 304 5 EDO EDO . G 2 SEP B 1 301 1 SEP SEP . H 3 CL B 1 302 2 CL CL . I 4 EDO B 1 303 2 EDO EDO . J 4 EDO B 1 304 3 EDO EDO . K 4 EDO B 1 305 4 EDO EDO . L 4 EDO B 1 306 6 EDO EDO . M 4 EDO B 1 307 7 EDO EDO . N 5 HOH A 1 401 1 HOH HOH . N 5 HOH A 2 402 2 HOH HOH . N 5 HOH A 3 403 3 HOH HOH . N 5 HOH A 4 404 4 HOH HOH . N 5 HOH A 5 405 5 HOH HOH . N 5 HOH A 6 406 6 HOH HOH . N 5 HOH A 7 407 7 HOH HOH . N 5 HOH A 8 408 11 HOH HOH . N 5 HOH A 9 409 18 HOH HOH . N 5 HOH A 10 410 19 HOH HOH . N 5 HOH A 11 411 24 HOH HOH . N 5 HOH A 12 412 25 HOH HOH . N 5 HOH A 13 413 29 HOH HOH . N 5 HOH A 14 414 30 HOH HOH . N 5 HOH A 15 415 32 HOH HOH . N 5 HOH A 16 416 33 HOH HOH . N 5 HOH A 17 417 36 HOH HOH . N 5 HOH A 18 418 39 HOH HOH . N 5 HOH A 19 419 40 HOH HOH . N 5 HOH A 20 420 42 HOH HOH . N 5 HOH A 21 421 43 HOH HOH . N 5 HOH A 22 422 47 HOH HOH . N 5 HOH A 23 423 49 HOH HOH . N 5 HOH A 24 424 52 HOH HOH . N 5 HOH A 25 425 54 HOH HOH . N 5 HOH A 26 426 57 HOH HOH . N 5 HOH A 27 427 58 HOH HOH . N 5 HOH A 28 428 59 HOH HOH . N 5 HOH A 29 429 60 HOH HOH . N 5 HOH A 30 430 62 HOH HOH . N 5 HOH A 31 431 64 HOH HOH . N 5 HOH A 32 432 66 HOH HOH . N 5 HOH A 33 433 69 HOH HOH . N 5 HOH A 34 434 70 HOH HOH . N 5 HOH A 35 435 71 HOH HOH . N 5 HOH A 36 436 73 HOH HOH . N 5 HOH A 37 437 77 HOH HOH . N 5 HOH A 38 438 78 HOH HOH . N 5 HOH A 39 439 79 HOH HOH . N 5 HOH A 40 440 82 HOH HOH . N 5 HOH A 41 441 84 HOH HOH . N 5 HOH A 42 442 91 HOH HOH . N 5 HOH A 43 443 97 HOH HOH . N 5 HOH A 44 444 98 HOH HOH . N 5 HOH A 45 445 103 HOH HOH . N 5 HOH A 46 446 104 HOH HOH . N 5 HOH A 47 447 111 HOH HOH . N 5 HOH A 48 448 112 HOH HOH . N 5 HOH A 49 449 113 HOH HOH . N 5 HOH A 50 450 115 HOH HOH . N 5 HOH A 51 451 118 HOH HOH . N 5 HOH A 52 452 121 HOH HOH . N 5 HOH A 53 453 125 HOH HOH . N 5 HOH A 54 454 128 HOH HOH . N 5 HOH A 55 455 132 HOH HOH . N 5 HOH A 56 456 133 HOH HOH . N 5 HOH A 57 457 135 HOH HOH . N 5 HOH A 58 458 138 HOH HOH . N 5 HOH A 59 459 141 HOH HOH . N 5 HOH A 60 460 145 HOH HOH . N 5 HOH A 61 461 146 HOH HOH . N 5 HOH A 62 462 150 HOH HOH . N 5 HOH A 63 463 152 HOH HOH . O 5 HOH B 1 401 8 HOH HOH . O 5 HOH B 2 402 9 HOH HOH . O 5 HOH B 3 403 10 HOH HOH . O 5 HOH B 4 404 12 HOH HOH . O 5 HOH B 5 405 13 HOH HOH . O 5 HOH B 6 406 14 HOH HOH . O 5 HOH B 7 407 15 HOH HOH . O 5 HOH B 8 408 16 HOH HOH . O 5 HOH B 9 409 17 HOH HOH . O 5 HOH B 10 410 20 HOH HOH . O 5 HOH B 11 411 21 HOH HOH . O 5 HOH B 12 412 22 HOH HOH . O 5 HOH B 13 413 26 HOH HOH . O 5 HOH B 14 414 27 HOH HOH . O 5 HOH B 15 415 28 HOH HOH . O 5 HOH B 16 416 31 HOH HOH . O 5 HOH B 17 417 35 HOH HOH . O 5 HOH B 18 418 37 HOH HOH . O 5 HOH B 19 419 38 HOH HOH . O 5 HOH B 20 420 41 HOH HOH . O 5 HOH B 21 421 45 HOH HOH . O 5 HOH B 22 422 46 HOH HOH . O 5 HOH B 23 423 48 HOH HOH . O 5 HOH B 24 424 50 HOH HOH . O 5 HOH B 25 425 51 HOH HOH . O 5 HOH B 26 426 53 HOH HOH . O 5 HOH B 27 427 55 HOH HOH . O 5 HOH B 28 428 61 HOH HOH . O 5 HOH B 29 429 63 HOH HOH . O 5 HOH B 30 430 65 HOH HOH . O 5 HOH B 31 431 67 HOH HOH . O 5 HOH B 32 432 68 HOH HOH . O 5 HOH B 33 433 72 HOH HOH . O 5 HOH B 34 434 74 HOH HOH . O 5 HOH B 35 435 75 HOH HOH . O 5 HOH B 36 436 76 HOH HOH . O 5 HOH B 37 437 80 HOH HOH . O 5 HOH B 38 438 81 HOH HOH . O 5 HOH B 39 439 83 HOH HOH . O 5 HOH B 40 440 85 HOH HOH . O 5 HOH B 41 441 86 HOH HOH . O 5 HOH B 42 442 87 HOH HOH . O 5 HOH B 43 443 88 HOH HOH . O 5 HOH B 44 444 89 HOH HOH . O 5 HOH B 45 445 90 HOH HOH . O 5 HOH B 46 446 92 HOH HOH . O 5 HOH B 47 447 93 HOH HOH . O 5 HOH B 48 448 94 HOH HOH . O 5 HOH B 49 449 95 HOH HOH . O 5 HOH B 50 450 96 HOH HOH . O 5 HOH B 51 451 99 HOH HOH . O 5 HOH B 52 452 100 HOH HOH . O 5 HOH B 53 453 101 HOH HOH . O 5 HOH B 54 454 102 HOH HOH . O 5 HOH B 55 455 105 HOH HOH . O 5 HOH B 56 456 106 HOH HOH . O 5 HOH B 57 457 107 HOH HOH . O 5 HOH B 58 458 108 HOH HOH . O 5 HOH B 59 459 109 HOH HOH . O 5 HOH B 60 460 110 HOH HOH . O 5 HOH B 61 461 114 HOH HOH . O 5 HOH B 62 462 116 HOH HOH . O 5 HOH B 63 463 117 HOH HOH . O 5 HOH B 64 464 119 HOH HOH . O 5 HOH B 65 465 120 HOH HOH . O 5 HOH B 66 466 122 HOH HOH . O 5 HOH B 67 467 123 HOH HOH . O 5 HOH B 68 468 124 HOH HOH . O 5 HOH B 69 469 126 HOH HOH . O 5 HOH B 70 470 127 HOH HOH . O 5 HOH B 71 471 129 HOH HOH . O 5 HOH B 72 472 130 HOH HOH . O 5 HOH B 73 473 131 HOH HOH . O 5 HOH B 74 474 134 HOH HOH . O 5 HOH B 75 475 136 HOH HOH . O 5 HOH B 76 476 137 HOH HOH . O 5 HOH B 77 477 139 HOH HOH . O 5 HOH B 78 478 140 HOH HOH . O 5 HOH B 79 479 142 HOH HOH . O 5 HOH B 80 480 144 HOH HOH . O 5 HOH B 81 481 147 HOH HOH . O 5 HOH B 82 482 148 HOH HOH . O 5 HOH B 83 483 149 HOH HOH . O 5 HOH B 84 484 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 4 -0.879 10.968 10.988 1 28.53 ? C1 EDO 303 B 1 HETATM 2 O O1 EDO . . . I 4 -0.734 11.156 12.4 1 28.17 ? O1 EDO 303 B 1 HETATM 3 C C2 EDO . . . I 4 0.259 11.681 10.273 1 29.05 ? C2 EDO 303 B 1 HETATM 4 O O2 EDO . . . I 4 -0.004 13.088 10.268 1 29.54 ? O2 EDO 303 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #