data_4IJ9 # _model_server_result.job_id Mp6JQ4koDIF5Ari0H9PgGw _model_server_result.datetime_utc '2024-11-22 07:22:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ij9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4IJ9 # _exptl.entry_id 4IJ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.375 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[[5-(4-pyridyl)-1H-1,2,4-triazol-3-yl]sulfanyl]-1-(2-thiophenyl)ethanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IJ9 _cell.length_a 72.68 _cell.length_b 75.61 _cell.length_c 79.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IJ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TRP 196 A TRP 196 1_555 A N TPO 197 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C TPO 197 A TPO 197 1_555 A N LEU 198 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C VAL 337 A VAL 337 1_555 A N SEP 338 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale4 A C SEP 338 A SEP 338 1_555 A N ILE 339 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? # _chem_comp.formula 'C13 H10 N4 O S2' _chem_comp.formula_weight 302.375 _chem_comp.id PTV _chem_comp.mon_nstd_flag . _chem_comp.name 2-[[5-(4-pyridyl)-1H-1,2,4-triazol-3-yl]sulfanyl]-1-(2-thiophenyl)ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 PTV doub 277 n y C2 C3 PTV sing 278 n y C1 S20 PTV sing 279 n y C3 C15 PTV doub 280 n y S20 C15 PTV sing 281 n y C15 C14 PTV sing 282 n n N17 N18 PTV sing 283 n y N17 C10 PTV sing 284 n y N18 C19 PTV doub 285 n y C14 C4 PTV sing 286 n n C14 O16 PTV doub 287 n n C8 C7 PTV doub 288 n y C8 C9 PTV sing 289 n y C4 S11 PTV sing 290 n n C7 N12 PTV sing 291 n y C10 C9 PTV sing 292 n n C10 N13 PTV doub 293 n y C19 S11 PTV sing 294 n n C19 N13 PTV sing 295 n y C9 C5 PTV doub 296 n y N12 C6 PTV doub 297 n y C5 C6 PTV sing 298 n y C3 H1 PTV sing 299 n n C2 H2 PTV sing 300 n n C1 H3 PTV sing 301 n n C4 H4 PTV sing 302 n n C4 H5 PTV sing 303 n n C5 H7 PTV sing 304 n n C6 H8 PTV sing 305 n n C7 H9 PTV sing 306 n n C8 H10 PTV sing 307 n n N17 H6 PTV sing 308 n n # _atom_sites.entry_id 4IJ9 _atom_sites.fract_transf_matrix[1][1] 0.013759 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013226 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01265 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PTV A 1 401 1 PTV INH . D 4 HOH A 1 501 1 HOH HOH . D 4 HOH A 2 502 2 HOH HOH . D 4 HOH A 3 503 3 HOH HOH . D 4 HOH A 4 504 4 HOH HOH . D 4 HOH A 5 505 5 HOH HOH . D 4 HOH A 6 506 6 HOH HOH . D 4 HOH A 7 507 7 HOH HOH . D 4 HOH A 8 508 8 HOH HOH . D 4 HOH A 9 509 9 HOH HOH . D 4 HOH A 10 510 10 HOH HOH . D 4 HOH A 11 511 12 HOH HOH . D 4 HOH A 12 512 13 HOH HOH . D 4 HOH A 13 513 14 HOH HOH . D 4 HOH A 14 514 15 HOH HOH . D 4 HOH A 15 515 16 HOH HOH . D 4 HOH A 16 516 17 HOH HOH . D 4 HOH A 17 517 18 HOH HOH . D 4 HOH A 18 518 19 HOH HOH . D 4 HOH A 19 519 20 HOH HOH . D 4 HOH A 20 520 21 HOH HOH . D 4 HOH A 21 521 22 HOH HOH . D 4 HOH A 22 522 24 HOH HOH . D 4 HOH A 23 523 25 HOH HOH . D 4 HOH A 24 524 26 HOH HOH . D 4 HOH A 25 525 27 HOH HOH . D 4 HOH A 26 526 28 HOH HOH . D 4 HOH A 27 527 29 HOH HOH . D 4 HOH A 28 528 33 HOH HOH . D 4 HOH A 29 529 34 HOH HOH . D 4 HOH A 30 530 35 HOH HOH . D 4 HOH A 31 531 36 HOH HOH . D 4 HOH A 32 532 37 HOH HOH . D 4 HOH A 33 533 38 HOH HOH . D 4 HOH A 34 534 39 HOH HOH . D 4 HOH A 35 535 40 HOH HOH . D 4 HOH A 36 536 41 HOH HOH . D 4 HOH A 37 537 42 HOH HOH . D 4 HOH A 38 538 43 HOH HOH . D 4 HOH A 39 539 44 HOH HOH . D 4 HOH A 40 540 45 HOH HOH . D 4 HOH A 41 541 46 HOH HOH . D 4 HOH A 42 542 47 HOH HOH . D 4 HOH A 43 543 48 HOH HOH . D 4 HOH A 44 544 51 HOH HOH . D 4 HOH A 45 545 52 HOH HOH . D 4 HOH A 46 546 53 HOH HOH . D 4 HOH A 47 547 54 HOH HOH . D 4 HOH A 48 548 55 HOH HOH . D 4 HOH A 49 549 56 HOH HOH . D 4 HOH A 50 550 59 HOH HOH . D 4 HOH A 51 551 60 HOH HOH . D 4 HOH A 52 552 61 HOH HOH . D 4 HOH A 53 553 62 HOH HOH . D 4 HOH A 54 554 63 HOH HOH . D 4 HOH A 55 555 64 HOH HOH . D 4 HOH A 56 556 65 HOH HOH . D 4 HOH A 57 557 66 HOH HOH . D 4 HOH A 58 558 67 HOH HOH . D 4 HOH A 59 559 68 HOH HOH . D 4 HOH A 60 560 69 HOH HOH . D 4 HOH A 61 561 70 HOH HOH . D 4 HOH A 62 562 71 HOH HOH . D 4 HOH A 63 563 72 HOH HOH . D 4 HOH A 64 564 73 HOH HOH . D 4 HOH A 65 565 74 HOH HOH . D 4 HOH A 66 566 75 HOH HOH . D 4 HOH A 67 567 76 HOH HOH . D 4 HOH A 68 568 77 HOH HOH . D 4 HOH A 69 569 78 HOH HOH . D 4 HOH A 70 570 79 HOH HOH . D 4 HOH A 71 571 80 HOH HOH . D 4 HOH A 72 572 81 HOH HOH . D 4 HOH A 73 573 82 HOH HOH . D 4 HOH A 74 574 83 HOH HOH . D 4 HOH A 75 575 84 HOH HOH . D 4 HOH A 76 576 87 HOH HOH . D 4 HOH A 77 577 88 HOH HOH . D 4 HOH A 78 578 89 HOH HOH . D 4 HOH A 79 579 90 HOH HOH . D 4 HOH A 80 580 91 HOH HOH . D 4 HOH A 81 581 92 HOH HOH . D 4 HOH A 82 582 93 HOH HOH . D 4 HOH A 83 583 94 HOH HOH . D 4 HOH A 84 584 96 HOH HOH . D 4 HOH A 85 585 97 HOH HOH . D 4 HOH A 86 586 98 HOH HOH . D 4 HOH A 87 587 99 HOH HOH . D 4 HOH A 88 588 100 HOH HOH . D 4 HOH A 89 589 101 HOH HOH . D 4 HOH A 90 590 102 HOH HOH . D 4 HOH A 91 591 103 HOH HOH . D 4 HOH A 92 592 104 HOH HOH . D 4 HOH A 93 593 105 HOH HOH . D 4 HOH A 94 594 106 HOH HOH . D 4 HOH A 95 595 107 HOH HOH . D 4 HOH A 96 596 108 HOH HOH . D 4 HOH A 97 597 109 HOH HOH . D 4 HOH A 98 598 111 HOH HOH . D 4 HOH A 99 599 112 HOH HOH . D 4 HOH A 100 600 113 HOH HOH . D 4 HOH A 101 601 114 HOH HOH . D 4 HOH A 102 602 115 HOH HOH . D 4 HOH A 103 603 116 HOH HOH . D 4 HOH A 104 604 117 HOH HOH . D 4 HOH A 105 605 118 HOH HOH . D 4 HOH A 106 606 119 HOH HOH . D 4 HOH A 107 607 120 HOH HOH . D 4 HOH A 108 608 121 HOH HOH . D 4 HOH A 109 609 123 HOH HOH . D 4 HOH A 110 610 124 HOH HOH . D 4 HOH A 111 611 125 HOH HOH . D 4 HOH A 112 612 126 HOH HOH . D 4 HOH A 113 613 127 HOH HOH . D 4 HOH A 114 614 128 HOH HOH . D 4 HOH A 115 615 129 HOH HOH . D 4 HOH A 116 616 130 HOH HOH . D 4 HOH A 117 617 131 HOH HOH . D 4 HOH A 118 618 132 HOH HOH . D 4 HOH A 119 619 133 HOH HOH . D 4 HOH A 120 620 134 HOH HOH . D 4 HOH A 121 621 135 HOH HOH . D 4 HOH A 122 622 136 HOH HOH . D 4 HOH A 123 623 137 HOH HOH . D 4 HOH A 124 624 138 HOH HOH . D 4 HOH A 125 625 139 HOH HOH . D 4 HOH A 126 626 140 HOH HOH . D 4 HOH A 127 627 141 HOH HOH . D 4 HOH A 128 628 143 HOH HOH . D 4 HOH A 129 629 144 HOH HOH . D 4 HOH A 130 630 145 HOH HOH . D 4 HOH A 131 631 146 HOH HOH . D 4 HOH A 132 632 147 HOH HOH . D 4 HOH A 133 633 149 HOH HOH . D 4 HOH A 134 634 150 HOH HOH . D 4 HOH A 135 635 151 HOH HOH . D 4 HOH A 136 636 152 HOH HOH . D 4 HOH A 137 637 153 HOH HOH . D 4 HOH A 138 638 154 HOH HOH . D 4 HOH A 139 639 155 HOH HOH . D 4 HOH A 140 640 156 HOH HOH . D 4 HOH A 141 641 157 HOH HOH . D 4 HOH A 142 642 158 HOH HOH . D 4 HOH A 143 643 159 HOH HOH . D 4 HOH A 144 644 160 HOH HOH . D 4 HOH A 145 645 161 HOH HOH . D 4 HOH A 146 646 162 HOH HOH . D 4 HOH A 147 647 163 HOH HOH . D 4 HOH A 148 648 164 HOH HOH . D 4 HOH A 149 649 166 HOH HOH . D 4 HOH A 150 650 168 HOH HOH . D 4 HOH A 151 651 169 HOH HOH . D 4 HOH A 152 652 170 HOH HOH . D 4 HOH A 153 653 171 HOH HOH . D 4 HOH A 154 654 172 HOH HOH . D 4 HOH A 155 655 173 HOH HOH . D 4 HOH A 156 656 174 HOH HOH . D 4 HOH A 157 657 175 HOH HOH . D 4 HOH A 158 658 176 HOH HOH . D 4 HOH A 159 659 177 HOH HOH . D 4 HOH A 160 660 178 HOH HOH . D 4 HOH A 161 661 179 HOH HOH . D 4 HOH A 162 662 180 HOH HOH . D 4 HOH A 163 663 181 HOH HOH . D 4 HOH A 164 664 182 HOH HOH . D 4 HOH A 165 665 183 HOH HOH . D 4 HOH A 166 666 184 HOH HOH . D 4 HOH A 167 667 186 HOH HOH . D 4 HOH A 168 668 187 HOH HOH . D 4 HOH A 169 669 188 HOH HOH . D 4 HOH A 170 670 189 HOH HOH . D 4 HOH A 171 671 191 HOH HOH . D 4 HOH A 172 672 192 HOH HOH . D 4 HOH A 173 673 193 HOH HOH . D 4 HOH A 174 674 194 HOH HOH . D 4 HOH A 175 675 195 HOH HOH . D 4 HOH A 176 676 196 HOH HOH . D 4 HOH A 177 677 197 HOH HOH . D 4 HOH A 178 678 198 HOH HOH . D 4 HOH A 179 679 200 HOH HOH . D 4 HOH A 180 680 201 HOH HOH . D 4 HOH A 181 681 202 HOH HOH . D 4 HOH A 182 682 203 HOH HOH . D 4 HOH A 183 683 204 HOH HOH . D 4 HOH A 184 684 206 HOH HOH . D 4 HOH A 185 685 207 HOH HOH . D 4 HOH A 186 686 208 HOH HOH . D 4 HOH A 187 687 209 HOH HOH . D 4 HOH A 188 688 210 HOH HOH . D 4 HOH A 189 689 211 HOH HOH . D 4 HOH A 190 690 212 HOH HOH . D 4 HOH A 191 691 213 HOH HOH . D 4 HOH A 192 692 214 HOH HOH . D 4 HOH A 193 693 215 HOH HOH . D 4 HOH A 194 694 216 HOH HOH . D 4 HOH A 195 695 217 HOH HOH . D 4 HOH A 196 696 218 HOH HOH . D 4 HOH A 197 697 219 HOH HOH . D 4 HOH A 198 698 220 HOH HOH . D 4 HOH A 199 699 222 HOH HOH . D 4 HOH A 200 700 223 HOH HOH . D 4 HOH A 201 701 224 HOH HOH . D 4 HOH A 202 702 225 HOH HOH . D 4 HOH A 203 703 226 HOH HOH . D 4 HOH A 204 704 227 HOH HOH . D 4 HOH A 205 705 228 HOH HOH . D 4 HOH A 206 706 229 HOH HOH . D 4 HOH A 207 707 230 HOH HOH . D 4 HOH A 208 708 231 HOH HOH . D 4 HOH A 209 709 232 HOH HOH . D 4 HOH A 210 710 233 HOH HOH . D 4 HOH A 211 711 234 HOH HOH . D 4 HOH A 212 712 235 HOH HOH . D 4 HOH A 213 713 142 HOH HOH . D 4 HOH A 214 714 185 HOH HOH . E 4 HOH I 1 101 11 HOH HOH . E 4 HOH I 2 102 23 HOH HOH . E 4 HOH I 3 103 30 HOH HOH . E 4 HOH I 4 104 31 HOH HOH . E 4 HOH I 5 105 32 HOH HOH . E 4 HOH I 6 106 49 HOH HOH . E 4 HOH I 7 107 50 HOH HOH . E 4 HOH I 8 108 57 HOH HOH . E 4 HOH I 9 109 58 HOH HOH . E 4 HOH I 10 110 86 HOH HOH . E 4 HOH I 11 111 95 HOH HOH . E 4 HOH I 12 112 110 HOH HOH . E 4 HOH I 13 113 122 HOH HOH . E 4 HOH I 14 114 148 HOH HOH . E 4 HOH I 15 115 165 HOH HOH . E 4 HOH I 16 116 167 HOH HOH . E 4 HOH I 17 117 190 HOH HOH . E 4 HOH I 18 118 199 HOH HOH . E 4 HOH I 19 119 205 HOH HOH . E 4 HOH I 20 120 221 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 PTV . . . C 3 13.051 11.095 -0.259 1 30.58 ? C3 PTV 401 A 1 HETATM 2 C C2 PTV . . . C 3 13.611 11.741 -1.299 1 32.68 ? C2 PTV 401 A 1 HETATM 3 C C1 PTV . . . C 3 13.551 13.088 -1.256 1 33.72 ? C1 PTV 401 A 1 HETATM 4 S S20 PTV . . . C 3 12.725 13.498 0.157 1 33.17 ? S20 PTV 401 A 1 HETATM 5 C C15 PTV . . . C 3 12.517 11.919 0.643 1 33.63 ? C15 PTV 401 A 1 HETATM 6 C C14 PTV . . . C 3 11.805 11.528 1.931 1 38.49 ? C14 PTV 401 A 1 HETATM 7 O O16 PTV . . . C 3 11.34 12.404 2.664 1 40.57 ? O16 PTV 401 A 1 HETATM 8 C C4 PTV . . . C 3 11.724 10.056 2.326 1 37.11 ? C4 PTV 401 A 1 HETATM 9 S S11 PTV . . . C 3 10.643 9.911 3.775 1 37.23 ? S11 PTV 401 A 1 HETATM 10 C C19 PTV . . . C 3 9.021 9.843 3.085 1 36.93 ? C19 PTV 401 A 1 HETATM 11 N N13 PTV . . . C 3 7.919 9.898 3.81 1 35.37 ? N13 PTV 401 A 1 HETATM 12 N N18 PTV . . . C 3 8.685 9.718 1.805 1 37.7 ? N18 PTV 401 A 1 HETATM 13 N N17 PTV . . . C 3 7.454 9.715 1.723 1 36.33 ? N17 PTV 401 A 1 HETATM 14 C C10 PTV . . . C 3 6.915 9.843 2.945 1 34.91 ? C10 PTV 401 A 1 HETATM 15 C C9 PTV . . . C 3 5.553 9.832 3.271 1 32.36 ? C9 PTV 401 A 1 HETATM 16 C C5 PTV . . . C 3 5.128 9.792 4.608 1 30.47 ? C5 PTV 401 A 1 HETATM 17 C C6 PTV . . . C 3 3.758 9.696 4.882 1 29.15 ? C6 PTV 401 A 1 HETATM 18 N N12 PTV . . . C 3 2.871 9.649 3.89 1 29.2 ? N12 PTV 401 A 1 HETATM 19 C C7 PTV . . . C 3 3.235 9.666 2.609 1 29.61 ? C7 PTV 401 A 1 HETATM 20 C C8 PTV . . . C 3 4.584 9.774 2.264 1 31.03 ? C8 PTV 401 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #