data_4IJD
#
_model_server_result.job_id            iEMdDyF0NIGAflRcYocGWg 
_model_server_result.datetime_utc      '2024-10-19 08:24:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ijd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    4IJD 
#
_exptl.entry_id    4IJD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.05 
_cell.angle_gamma         90 
_cell.entry_id            4IJD 
_cell.length_a            54.734 
_cell.length_b            48.782 
_cell.length_c            78.713 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IJD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,EA 1 1 
B,U,V,W,X,Y,Z,AA,BA,CA,DA,FA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 U N N 
? 2 V N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 157 A CYS 351 1_555 A SG CYS 200 A CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf2 B SG CYS 157 B CYS 351 1_555 B SG CYS 200 B CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
covale ? covale1 A C GLU 12 A GLU 206 1_555 A N MSE 13 A MSE 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C MSE 13 A MSE 207 1_555 A N CYS 14 A CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale3 A C TRP 121 A TRP 315 1_555 A N MSE 122 A MSE 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale4 A C MSE 122 A MSE 316 1_555 A N ARG 123 A ARG 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale5 A C LEU 183 A LEU 377 1_555 A N MSE 184 A MSE 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale6 B C GLU 12 B GLU 206 1_555 B N MSE 13 B MSE 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale7 B C MSE 13 B MSE 207 1_555 B N CYS 14 B CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale8 B C TRP 121 B TRP 315 1_555 B N MSE 122 B MSE 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale9 B C MSE 122 B MSE 316 1_555 B N ARG 123 B ARG 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 B C LEU 183 B LEU 377 1_555 B N MSE 184 B MSE 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
metalc ? metalc1 A NE2 HIS 212 A HIS 406 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? 
metalc ? metalc2 A NE2 HIS 217 A HIS 411 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? 
metalc ? metalc3 B NE2 HIS 212 B HIS 406 1_555 V ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc4 B ND1 HIS 25 B HIS 219 1_555 U ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc5 A ND1 HIS 25 A HIS 219 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc6 B NE2 HIS 217 B HIS 411 1_555 V ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc7 A SG CYS 11 A CYS 205 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc8 A SG CYS 199 A CYS 393 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc9 A SG CYS 196 A CYS 390 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc10 B SG CYS 11 B CYS 205 1_555 U ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc11 A SG CYS 22 A CYS 216 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc12 B SG CYS 196 B CYS 390 1_555 V ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc13 B SG CYS 199 B CYS 393 1_555 V ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc14 A SG CYS 14 A CYS 208 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc15 B SG CYS 22 B CYS 216 1_555 U ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc16 B SG CYS 14 B CYS 208 1_555 U ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4IJD 
_atom_sites.fract_transf_matrix[1][1]    0.01827 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003238 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020499 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012902 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 501 1000 ZN ZN . 
D 2 ZN A 1 502 1001 ZN ZN . 
E 3 UNX A 1 503 1002 UNX UNX . 
F 3 UNX A 1 504 1003 UNX UNX . 
G 3 UNX A 1 505 1005 UNX UNX . 
H 3 UNX A 1 506 1006 UNX UNX . 
I 3 UNX A 1 507 1007 UNX UNX . 
J 3 UNX A 1 508 1008 UNX UNX . 
K 3 UNX A 1 509 1009 UNX UNX . 
L 3 UNX A 1 510 1010 UNX UNX . 
M 3 UNX A 1 511 1014 UNX UNX . 
N 3 UNX A 1 512 1015 UNX UNX . 
O 3 UNX A 1 513 1016 UNX UNX . 
P 3 UNX A 1 514 1017 UNX UNX . 
Q 3 UNX A 1 515 1020 UNX UNX . 
R 3 UNX A 1 516 1021 UNX UNX . 
S 3 UNX A 1 517 1022 UNX UNX . 
T 3 UNX A 1 518 1023 UNX UNX . 
U 2 ZN B 1 501 1000 ZN ZN . 
V 2 ZN B 1 502 1001 ZN ZN . 
W 3 UNX B 1 503 1001 UNX UNX . 
X 3 UNX B 1 504 1004 UNX UNX . 
Y 3 UNX B 1 505 1011 UNX UNX . 
Z 3 UNX B 1 506 1012 UNX UNX . 
AA 3 UNX B 1 507 1013 UNX UNX . 
BA 3 UNX B 1 508 1018 UNX UNX . 
CA 3 UNX B 1 509 1019 UNX UNX . 
DA 3 UNX B 1 510 1024 UNX UNX . 
EA 4 HOH A 1 601 1 HOH HOH . 
EA 4 HOH A 2 602 3 HOH HOH . 
EA 4 HOH A 3 603 5 HOH HOH . 
EA 4 HOH A 4 604 6 HOH HOH . 
EA 4 HOH A 5 605 7 HOH HOH . 
EA 4 HOH A 6 606 8 HOH HOH . 
EA 4 HOH A 7 607 9 HOH HOH . 
EA 4 HOH A 8 608 11 HOH HOH . 
EA 4 HOH A 9 609 12 HOH HOH . 
EA 4 HOH A 10 610 13 HOH HOH . 
EA 4 HOH A 11 611 15 HOH HOH . 
EA 4 HOH A 12 612 16 HOH HOH . 
EA 4 HOH A 13 613 17 HOH HOH . 
EA 4 HOH A 14 614 18 HOH HOH . 
EA 4 HOH A 15 615 19 HOH HOH . 
EA 4 HOH A 16 616 21 HOH HOH . 
EA 4 HOH A 17 617 22 HOH HOH . 
EA 4 HOH A 18 618 23 HOH HOH . 
EA 4 HOH A 19 619 24 HOH HOH . 
EA 4 HOH A 20 620 25 HOH HOH . 
EA 4 HOH A 21 621 26 HOH HOH . 
EA 4 HOH A 22 622 27 HOH HOH . 
EA 4 HOH A 23 623 28 HOH HOH . 
EA 4 HOH A 24 624 30 HOH HOH . 
EA 4 HOH A 25 625 31 HOH HOH . 
EA 4 HOH A 26 626 33 HOH HOH . 
EA 4 HOH A 27 627 34 HOH HOH . 
EA 4 HOH A 28 628 35 HOH HOH . 
EA 4 HOH A 29 629 36 HOH HOH . 
EA 4 HOH A 30 630 37 HOH HOH . 
EA 4 HOH A 31 631 45 HOH HOH . 
EA 4 HOH A 32 632 46 HOH HOH . 
EA 4 HOH A 33 633 47 HOH HOH . 
EA 4 HOH A 34 634 48 HOH HOH . 
EA 4 HOH A 35 635 49 HOH HOH . 
EA 4 HOH A 36 636 50 HOH HOH . 
EA 4 HOH A 37 637 51 HOH HOH . 
EA 4 HOH A 38 638 52 HOH HOH . 
EA 4 HOH A 39 639 53 HOH HOH . 
EA 4 HOH A 40 640 55 HOH HOH . 
EA 4 HOH A 41 641 58 HOH HOH . 
EA 4 HOH A 42 642 59 HOH HOH . 
FA 4 HOH B 1 601 2 HOH HOH . 
FA 4 HOH B 2 602 4 HOH HOH . 
FA 4 HOH B 3 603 10 HOH HOH . 
FA 4 HOH B 4 604 14 HOH HOH . 
FA 4 HOH B 5 605 20 HOH HOH . 
FA 4 HOH B 6 606 29 HOH HOH . 
FA 4 HOH B 7 607 32 HOH HOH . 
FA 4 HOH B 8 608 38 HOH HOH . 
FA 4 HOH B 9 609 39 HOH HOH . 
FA 4 HOH B 10 610 40 HOH HOH . 
FA 4 HOH B 11 611 41 HOH HOH . 
FA 4 HOH B 12 612 42 HOH HOH . 
FA 4 HOH B 13 613 43 HOH HOH . 
FA 4 HOH B 14 614 54 HOH HOH . 
FA 4 HOH B 15 615 56 HOH HOH . 
FA 4 HOH B 16 616 57 HOH HOH . 
FA 4 HOH B 17 617 60 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               9.307 
_atom_site.Cartn_y               4.383 
_atom_site.Cartn_z               17.218 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        58.51 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#