data_4IKB # _model_server_result.job_id keCJg4IsL1xqFT4XenOK1A _model_server_result.datetime_utc '2025-03-05 20:00:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ikb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":203}' # _entry.id 4IKB # _exptl.entry_id 4IKB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.489 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.13 _cell.angle_gamma 90 _cell.entry_id 4IKB _cell.length_a 53.48 _cell.length_b 38.74 _cell.length_c 73.46 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IKB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N ? 4 N N N ? 4 Q N N ? 4 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 48 A SER 54 1_555 A N CAS 49 A CAS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C CAS 49 A CAS 55 1_555 A N VAL 50 A VAL 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ALA 131 A ALA 137 1_555 A N CAS 132 A CAS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C CAS 132 A CAS 138 1_555 A N VAL 133 A VAL 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale5 B C SER 48 B SER 54 1_555 B N CAS 49 B CAS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C CAS 49 B CAS 55 1_555 B N VAL 50 B VAL 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale7 B C ALA 131 B ALA 137 1_555 B N SCS 132 B SCS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 B C SCS 132 B SCS 138 1_555 B N VAL 133 B VAL 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C18 H38 O9' _chem_comp.formula_weight 398.489 _chem_comp.id PE5 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, POLYETHYLENE GLYCOL PEG400' # _atom_sites.entry_id 4IKB _atom_sites.fract_transf_matrix[1][1] 0.018699 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003679 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025813 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 201 1 SO4 SO4 . D 3 SO4 A 1 202 2 SO4 SO4 . E 3 SO4 A 1 203 4 SO4 SO4 . F 3 SO4 A 1 204 5 SO4 SO4 . G 3 SO4 A 1 205 6 SO4 SO4 . H 3 SO4 A 1 206 7 SO4 SO4 . I 4 PE5 A 1 207 3 PE5 PE5 . J 4 PE5 A 1 208 1 PE5 PE5 . K 5 CL A 1 209 1 CL CL . L 6 NA A 1 210 1 NA NA . M 5 CL A 1 211 1 CL CL . N 4 PE5 A 1 212 1 PE5 PE5 . O 3 SO4 B 1 201 3 SO4 SO4 . P 3 SO4 B 1 202 8 SO4 SO4 . Q 4 PE5 B 1 203 2 PE5 PE5 . R 6 NA B 1 204 1 NA NA . S 5 CL B 1 205 1 CL CL . T 4 PE5 B 1 206 1 PE5 PE5 . U 7 HOH A 1 301 2 HOH HOH . U 7 HOH A 2 302 3 HOH HOH . U 7 HOH A 3 303 6 HOH HOH . U 7 HOH A 4 304 14 HOH HOH . U 7 HOH A 5 305 17 HOH HOH . U 7 HOH A 6 306 20 HOH HOH . U 7 HOH A 7 307 23 HOH HOH . U 7 HOH A 8 308 24 HOH HOH . U 7 HOH A 9 309 28 HOH HOH . U 7 HOH A 10 310 31 HOH HOH . U 7 HOH A 11 311 35 HOH HOH . U 7 HOH A 12 312 39 HOH HOH . U 7 HOH A 13 313 41 HOH HOH . U 7 HOH A 14 314 46 HOH HOH . U 7 HOH A 15 315 49 HOH HOH . U 7 HOH A 16 316 50 HOH HOH . U 7 HOH A 17 317 53 HOH HOH . U 7 HOH A 18 318 54 HOH HOH . U 7 HOH A 19 319 60 HOH HOH . U 7 HOH A 20 320 344 HOH HOH . U 7 HOH A 21 321 353 HOH HOH . U 7 HOH A 22 322 392 HOH HOH . U 7 HOH A 23 323 399 HOH HOH . U 7 HOH A 24 324 400 HOH HOH . U 7 HOH A 25 325 402 HOH HOH . U 7 HOH A 26 326 403 HOH HOH . U 7 HOH A 27 327 407 HOH HOH . U 7 HOH A 28 328 412 HOH HOH . U 7 HOH A 29 329 414 HOH HOH . U 7 HOH A 30 330 417 HOH HOH . U 7 HOH A 31 331 418 HOH HOH . U 7 HOH A 32 332 420 HOH HOH . U 7 HOH A 33 333 421 HOH HOH . U 7 HOH A 34 334 427 HOH HOH . U 7 HOH A 35 335 429 HOH HOH . U 7 HOH A 36 336 431 HOH HOH . U 7 HOH A 37 337 434 HOH HOH . U 7 HOH A 38 338 440 HOH HOH . U 7 HOH A 39 339 442 HOH HOH . U 7 HOH A 40 340 454 HOH HOH . U 7 HOH A 41 341 457 HOH HOH . U 7 HOH A 42 342 459 HOH HOH . U 7 HOH A 43 343 461 HOH HOH . U 7 HOH A 44 344 485 HOH HOH . U 7 HOH A 45 345 505 HOH HOH . U 7 HOH A 46 346 514 HOH HOH . U 7 HOH A 47 347 516 HOH HOH . U 7 HOH A 48 348 518 HOH HOH . U 7 HOH A 49 349 521 HOH HOH . U 7 HOH A 50 350 525 HOH HOH . U 7 HOH A 51 351 527 HOH HOH . U 7 HOH A 52 352 528 HOH HOH . U 7 HOH A 53 353 529 HOH HOH . U 7 HOH A 54 354 530 HOH HOH . U 7 HOH A 55 355 531 HOH HOH . U 7 HOH A 56 356 532 HOH HOH . U 7 HOH A 57 357 533 HOH HOH . U 7 HOH A 58 358 534 HOH HOH . U 7 HOH A 59 359 537 HOH HOH . U 7 HOH A 60 360 540 HOH HOH . U 7 HOH A 61 361 543 HOH HOH . U 7 HOH A 62 362 544 HOH HOH . U 7 HOH A 63 363 545 HOH HOH . U 7 HOH A 64 364 548 HOH HOH . U 7 HOH A 65 365 554 HOH HOH . U 7 HOH A 66 366 555 HOH HOH . U 7 HOH A 67 367 556 HOH HOH . U 7 HOH A 68 368 559 HOH HOH . U 7 HOH A 69 369 560 HOH HOH . U 7 HOH A 70 370 562 HOH HOH . U 7 HOH A 71 371 566 HOH HOH . U 7 HOH A 72 372 567 HOH HOH . U 7 HOH A 73 373 568 HOH HOH . U 7 HOH A 74 374 569 HOH HOH . U 7 HOH A 75 375 570 HOH HOH . U 7 HOH A 76 376 571 HOH HOH . U 7 HOH A 77 377 576 HOH HOH . U 7 HOH A 78 378 577 HOH HOH . U 7 HOH A 79 379 579 HOH HOH . U 7 HOH A 80 380 580 HOH HOH . U 7 HOH A 81 381 581 HOH HOH . U 7 HOH A 82 382 586 HOH HOH . U 7 HOH A 83 383 587 HOH HOH . U 7 HOH A 84 384 590 HOH HOH . U 7 HOH A 85 385 591 HOH HOH . U 7 HOH A 86 386 597 HOH HOH . U 7 HOH A 87 387 598 HOH HOH . U 7 HOH A 88 388 599 HOH HOH . U 7 HOH A 89 389 602 HOH HOH . U 7 HOH A 90 390 1 HOH HOH . U 7 HOH A 91 391 1 HOH HOH . U 7 HOH A 92 392 7 HOH HOH . U 7 HOH A 93 393 12 HOH HOH . U 7 HOH A 94 394 13 HOH HOH . U 7 HOH A 95 395 15 HOH HOH . U 7 HOH A 96 396 16 HOH HOH . U 7 HOH A 97 397 20 HOH HOH . U 7 HOH A 98 398 21 HOH HOH . U 7 HOH A 99 399 22 HOH HOH . U 7 HOH A 100 400 25 HOH HOH . U 7 HOH A 101 401 28 HOH HOH . U 7 HOH A 102 402 29 HOH HOH . U 7 HOH A 103 403 30 HOH HOH . U 7 HOH A 104 404 31 HOH HOH . U 7 HOH A 105 405 33 HOH HOH . U 7 HOH A 106 406 36 HOH HOH . U 7 HOH A 107 407 38 HOH HOH . U 7 HOH A 108 408 41 HOH HOH . U 7 HOH A 109 409 50 HOH HOH . U 7 HOH A 110 410 59 HOH HOH . U 7 HOH A 111 411 60 HOH HOH . U 7 HOH A 112 412 66 HOH HOH . U 7 HOH A 113 413 76 HOH HOH . U 7 HOH A 114 414 77 HOH HOH . U 7 HOH A 115 415 155 HOH HOH . U 7 HOH A 116 416 2 HOH HOH . U 7 HOH A 117 417 4 HOH HOH . U 7 HOH A 118 418 5 HOH HOH . U 7 HOH A 119 419 6 HOH HOH . U 7 HOH A 120 420 8 HOH HOH . U 7 HOH A 121 421 9 HOH HOH . U 7 HOH A 122 422 10 HOH HOH . U 7 HOH A 123 423 11 HOH HOH . U 7 HOH A 124 424 14 HOH HOH . U 7 HOH A 125 425 15 HOH HOH . U 7 HOH A 126 426 23 HOH HOH . U 7 HOH A 127 427 42 HOH HOH . U 7 HOH A 128 428 2 HOH HOH . U 7 HOH A 129 429 4 HOH HOH . U 7 HOH A 130 430 10 HOH HOH . U 7 HOH A 131 431 23 HOH HOH . U 7 HOH A 132 432 26 HOH HOH . U 7 HOH A 133 433 29 HOH HOH . U 7 HOH A 134 434 33 HOH HOH . U 7 HOH A 135 435 34 HOH HOH . U 7 HOH A 136 436 35 HOH HOH . U 7 HOH A 137 437 37 HOH HOH . U 7 HOH A 138 438 520 HOH HOH . V 7 HOH B 1 301 4 HOH HOH . V 7 HOH B 2 302 8 HOH HOH . V 7 HOH B 3 303 10 HOH HOH . V 7 HOH B 4 304 11 HOH HOH . V 7 HOH B 5 305 16 HOH HOH . V 7 HOH B 6 306 18 HOH HOH . V 7 HOH B 7 307 19 HOH HOH . V 7 HOH B 8 308 25 HOH HOH . V 7 HOH B 9 309 38 HOH HOH . V 7 HOH B 10 310 40 HOH HOH . V 7 HOH B 11 311 48 HOH HOH . V 7 HOH B 12 312 51 HOH HOH . V 7 HOH B 13 313 55 HOH HOH . V 7 HOH B 14 314 57 HOH HOH . V 7 HOH B 15 315 59 HOH HOH . V 7 HOH B 16 316 348 HOH HOH . V 7 HOH B 17 317 350 HOH HOH . V 7 HOH B 18 318 394 HOH HOH . V 7 HOH B 19 319 396 HOH HOH . V 7 HOH B 20 320 397 HOH HOH . V 7 HOH B 21 321 401 HOH HOH . V 7 HOH B 22 322 411 HOH HOH . V 7 HOH B 23 323 413 HOH HOH . V 7 HOH B 24 324 416 HOH HOH . V 7 HOH B 25 325 419 HOH HOH . V 7 HOH B 26 326 422 HOH HOH . V 7 HOH B 27 327 435 HOH HOH . V 7 HOH B 28 328 447 HOH HOH . V 7 HOH B 29 329 450 HOH HOH . V 7 HOH B 30 330 460 HOH HOH . V 7 HOH B 31 331 467 HOH HOH . V 7 HOH B 32 332 474 HOH HOH . V 7 HOH B 33 333 479 HOH HOH . V 7 HOH B 34 334 515 HOH HOH . V 7 HOH B 35 335 517 HOH HOH . V 7 HOH B 36 336 519 HOH HOH . V 7 HOH B 37 337 522 HOH HOH . V 7 HOH B 38 338 523 HOH HOH . V 7 HOH B 39 339 524 HOH HOH . V 7 HOH B 40 340 526 HOH HOH . V 7 HOH B 41 341 535 HOH HOH . V 7 HOH B 42 342 536 HOH HOH . V 7 HOH B 43 343 538 HOH HOH . V 7 HOH B 44 344 539 HOH HOH . V 7 HOH B 45 345 541 HOH HOH . V 7 HOH B 46 346 546 HOH HOH . V 7 HOH B 47 347 547 HOH HOH . V 7 HOH B 48 348 549 HOH HOH . V 7 HOH B 49 349 550 HOH HOH . V 7 HOH B 50 350 551 HOH HOH . V 7 HOH B 51 351 552 HOH HOH . V 7 HOH B 52 352 553 HOH HOH . V 7 HOH B 53 353 557 HOH HOH . V 7 HOH B 54 354 558 HOH HOH . V 7 HOH B 55 355 561 HOH HOH . V 7 HOH B 56 356 563 HOH HOH . V 7 HOH B 57 357 564 HOH HOH . V 7 HOH B 58 358 565 HOH HOH . V 7 HOH B 59 359 572 HOH HOH . V 7 HOH B 60 360 573 HOH HOH . V 7 HOH B 61 361 574 HOH HOH . V 7 HOH B 62 362 575 HOH HOH . V 7 HOH B 63 363 578 HOH HOH . V 7 HOH B 64 364 582 HOH HOH . V 7 HOH B 65 365 583 HOH HOH . V 7 HOH B 66 366 584 HOH HOH . V 7 HOH B 67 367 585 HOH HOH . V 7 HOH B 68 368 588 HOH HOH . V 7 HOH B 69 369 589 HOH HOH . V 7 HOH B 70 370 592 HOH HOH . V 7 HOH B 71 371 593 HOH HOH . V 7 HOH B 72 372 594 HOH HOH . V 7 HOH B 73 373 595 HOH HOH . V 7 HOH B 74 374 596 HOH HOH . V 7 HOH B 75 375 600 HOH HOH . V 7 HOH B 76 376 601 HOH HOH . V 7 HOH B 77 377 603 HOH HOH . V 7 HOH B 78 378 8 HOH HOH . V 7 HOH B 79 379 5 HOH HOH . V 7 HOH B 80 380 2 HOH HOH . V 7 HOH B 81 381 3 HOH HOH . V 7 HOH B 82 382 6 HOH HOH . V 7 HOH B 83 383 9 HOH HOH . V 7 HOH B 84 384 10 HOH HOH . V 7 HOH B 85 385 14 HOH HOH . V 7 HOH B 86 386 17 HOH HOH . V 7 HOH B 87 387 18 HOH HOH . V 7 HOH B 88 388 19 HOH HOH . V 7 HOH B 89 389 24 HOH HOH . V 7 HOH B 90 390 34 HOH HOH . V 7 HOH B 91 391 37 HOH HOH . V 7 HOH B 92 392 49 HOH HOH . V 7 HOH B 93 393 57 HOH HOH . V 7 HOH B 94 394 69 HOH HOH . V 7 HOH B 95 395 70 HOH HOH . V 7 HOH B 96 396 156 HOH HOH . V 7 HOH B 97 397 157 HOH HOH . V 7 HOH B 98 398 160 HOH HOH . V 7 HOH B 99 399 12 HOH HOH . V 7 HOH B 100 400 16 HOH HOH . V 7 HOH B 101 401 25 HOH HOH . V 7 HOH B 102 402 55 HOH HOH . V 7 HOH B 103 403 3 HOH HOH . V 7 HOH B 104 404 5 HOH HOH . V 7 HOH B 105 405 8 HOH HOH . V 7 HOH B 106 406 15 HOH HOH . V 7 HOH B 107 407 22 HOH HOH . V 7 HOH B 108 408 32 HOH HOH . V 7 HOH B 109 409 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 PE5 . . . Q 4 24.906 25.909 30.081 1 26.25 ? C5 PE5 203 B 1 HETATM 2 C C6 PE5 . . . Q 4 25.602 25.826 31.417 1 28.22 ? C6 PE5 203 B 1 HETATM 3 O O4 PE5 . . . Q 4 26.352 24.636 31.543 1 31.07 ? O4 PE5 203 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 621 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 3 #