data_4IKV # _model_server_result.job_id BqhDNh7MCpwIaEl0jrPvcQ _model_server_result.datetime_utc '2024-11-23 09:48:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ikv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":612}' # _entry.id 4IKV # _exptl.entry_id 4IKV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.1 _cell.angle_gamma 90 _cell.entry_id 4IKV _cell.length_a 50.761 _cell.length_b 94.917 _cell.length_c 57.253 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IKV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id M _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLB _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O19 OLB doub 290 n n C1 O20 OLB sing 291 n n C2 C1 OLB sing 292 n n C3 C2 OLB sing 293 n n C4 C3 OLB sing 294 n n C5 C4 OLB sing 295 n n C5 C6 OLB sing 296 n n O20 C21 OLB sing 297 n n C21 C22 OLB sing 298 n n C22 C24 OLB sing 299 n n O23 C22 OLB sing 300 n n C24 O25 OLB sing 301 n n C6 C7 OLB sing 302 n n C7 C8 OLB sing 303 n n C8 C9 OLB sing 304 n n C9 C10 OLB doub 305 z n C10 C11 OLB sing 306 n n C2 H2 OLB sing 307 n n C2 H2A OLB sing 308 n n C3 H3 OLB sing 309 n n C3 H3A OLB sing 310 n n C4 H4 OLB sing 311 n n C4 H4A OLB sing 312 n n C5 H5 OLB sing 313 n n C5 H5A OLB sing 314 n n C21 H21 OLB sing 315 n n C21 H21A OLB sing 316 n n C22 H22 OLB sing 317 n n O23 HO23 OLB sing 318 n n C24 H24 OLB sing 319 n n C24 H24A OLB sing 320 n n O25 HO25 OLB sing 321 n n C6 H16 OLB sing 322 n n C6 H17 OLB sing 323 n n C7 H18 OLB sing 324 n n C7 H19 OLB sing 325 n n C8 H20 OLB sing 326 n n C8 H211 OLB sing 327 n n C9 H221 OLB sing 328 n n C10 H23 OLB sing 329 n n C11 H241 OLB sing 330 n n C11 H25 OLB sing 331 n n C11 C12 OLB sing 332 n n C12 H26 OLB sing 333 n n C12 C13 OLB sing 334 n n C12 H27 OLB sing 335 n n C13 C14 OLB sing 336 n n C13 H28 OLB sing 337 n n C13 H29 OLB sing 338 n n C14 H30 OLB sing 339 n n C14 H31 OLB sing 340 n n C14 C15 OLB sing 341 n n C15 C16 OLB sing 342 n n C15 H32 OLB sing 343 n n C15 H33 OLB sing 344 n n C16 H34 OLB sing 345 n n C16 H35 OLB sing 346 n n C16 C17 OLB sing 347 n n C17 C18 OLB sing 348 n n C17 H36 OLB sing 349 n n C17 H37 OLB sing 350 n n C18 H38 OLB sing 351 n n C18 H39 OLB sing 352 n n C18 H40 OLB sing 353 n n # _atom_sites.entry_id 4IKV _atom_sites.fract_transf_matrix[1][1] 0.0197 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007603 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018722 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 601 1 SO4 SO4 . C 2 SO4 A 1 602 2 SO4 SO4 . D 2 SO4 A 1 603 3 SO4 SO4 . E 2 SO4 A 1 604 4 SO4 SO4 . F 3 OLA A 1 605 1 OLA OLA . G 3 OLA A 1 606 2 OLA OLA . H 3 OLA A 1 607 3 OLA OLA . I 3 OLA A 1 608 4 OLA OLA . J 3 OLA A 1 609 6 OLA OLA . K 3 OLA A 1 610 7 OLA OLA . L 3 OLA A 1 611 9 OLA OLA . M 4 OLB A 1 612 10 OLB OLB . N 5 PG4 A 1 613 101 PG4 PG4 . O 6 HOH A 1 701 1 HOH HOH . O 6 HOH A 2 702 2 HOH HOH . O 6 HOH A 3 703 3 HOH HOH . O 6 HOH A 4 704 4 HOH HOH . O 6 HOH A 5 705 5 HOH HOH . O 6 HOH A 6 706 6 HOH HOH . O 6 HOH A 7 707 7 HOH HOH . O 6 HOH A 8 708 8 HOH HOH . O 6 HOH A 9 709 9 HOH HOH . O 6 HOH A 10 710 10 HOH HOH . O 6 HOH A 11 711 11 HOH HOH . O 6 HOH A 12 712 12 HOH HOH . O 6 HOH A 13 713 13 HOH HOH . O 6 HOH A 14 714 14 HOH HOH . O 6 HOH A 15 715 15 HOH HOH . O 6 HOH A 16 716 16 HOH HOH . O 6 HOH A 17 717 17 HOH HOH . O 6 HOH A 18 718 18 HOH HOH . O 6 HOH A 19 719 19 HOH HOH . O 6 HOH A 20 720 20 HOH HOH . O 6 HOH A 21 721 21 HOH HOH . O 6 HOH A 22 722 22 HOH HOH . O 6 HOH A 23 723 23 HOH HOH . O 6 HOH A 24 724 24 HOH HOH . O 6 HOH A 25 725 25 HOH HOH . O 6 HOH A 26 726 26 HOH HOH . O 6 HOH A 27 727 27 HOH HOH . O 6 HOH A 28 728 29 HOH HOH . O 6 HOH A 29 729 30 HOH HOH . O 6 HOH A 30 730 31 HOH HOH . O 6 HOH A 31 731 32 HOH HOH . O 6 HOH A 32 732 33 HOH HOH . O 6 HOH A 33 733 34 HOH HOH . O 6 HOH A 34 734 35 HOH HOH . O 6 HOH A 35 735 36 HOH HOH . O 6 HOH A 36 736 37 HOH HOH . O 6 HOH A 37 737 38 HOH HOH . O 6 HOH A 38 738 39 HOH HOH . O 6 HOH A 39 739 40 HOH HOH . O 6 HOH A 40 740 41 HOH HOH . O 6 HOH A 41 741 42 HOH HOH . O 6 HOH A 42 742 43 HOH HOH . O 6 HOH A 43 743 44 HOH HOH . O 6 HOH A 44 744 45 HOH HOH . O 6 HOH A 45 745 46 HOH HOH . O 6 HOH A 46 746 47 HOH HOH . O 6 HOH A 47 747 48 HOH HOH . O 6 HOH A 48 748 49 HOH HOH . O 6 HOH A 49 749 50 HOH HOH . O 6 HOH A 50 750 51 HOH HOH . O 6 HOH A 51 751 52 HOH HOH . O 6 HOH A 52 752 53 HOH HOH . O 6 HOH A 53 753 54 HOH HOH . O 6 HOH A 54 754 55 HOH HOH . O 6 HOH A 55 755 56 HOH HOH . O 6 HOH A 56 756 58 HOH HOH . O 6 HOH A 57 757 61 HOH HOH . O 6 HOH A 58 758 62 HOH HOH . O 6 HOH A 59 759 63 HOH HOH . O 6 HOH A 60 760 64 HOH HOH . O 6 HOH A 61 761 65 HOH HOH . O 6 HOH A 62 762 66 HOH HOH . O 6 HOH A 63 763 67 HOH HOH . O 6 HOH A 64 764 69 HOH HOH . O 6 HOH A 65 765 70 HOH HOH . O 6 HOH A 66 766 71 HOH HOH . O 6 HOH A 67 767 72 HOH HOH . O 6 HOH A 68 768 73 HOH HOH . O 6 HOH A 69 769 74 HOH HOH . O 6 HOH A 70 770 75 HOH HOH . O 6 HOH A 71 771 76 HOH HOH . O 6 HOH A 72 772 77 HOH HOH . O 6 HOH A 73 773 78 HOH HOH . O 6 HOH A 74 774 79 HOH HOH . O 6 HOH A 75 775 81 HOH HOH . O 6 HOH A 76 776 82 HOH HOH . O 6 HOH A 77 777 83 HOH HOH . O 6 HOH A 78 778 84 HOH HOH . O 6 HOH A 79 779 85 HOH HOH . O 6 HOH A 80 780 86 HOH HOH . O 6 HOH A 81 781 87 HOH HOH . O 6 HOH A 82 782 88 HOH HOH . O 6 HOH A 83 783 90 HOH HOH . O 6 HOH A 84 784 91 HOH HOH . O 6 HOH A 85 785 94 HOH HOH . O 6 HOH A 86 786 96 HOH HOH . O 6 HOH A 87 787 97 HOH HOH . O 6 HOH A 88 788 98 HOH HOH . O 6 HOH A 89 789 99 HOH HOH . O 6 HOH A 90 790 100 HOH HOH . O 6 HOH A 91 791 101 HOH HOH . O 6 HOH A 92 792 102 HOH HOH . O 6 HOH A 93 793 103 HOH HOH . O 6 HOH A 94 794 104 HOH HOH . O 6 HOH A 95 795 105 HOH HOH . O 6 HOH A 96 796 106 HOH HOH . O 6 HOH A 97 797 107 HOH HOH . O 6 HOH A 98 798 108 HOH HOH . O 6 HOH A 99 799 109 HOH HOH . O 6 HOH A 100 800 110 HOH HOH . O 6 HOH A 101 801 111 HOH HOH . O 6 HOH A 102 802 112 HOH HOH . O 6 HOH A 103 803 113 HOH HOH . O 6 HOH A 104 804 114 HOH HOH . O 6 HOH A 105 805 115 HOH HOH . O 6 HOH A 106 806 116 HOH HOH . O 6 HOH A 107 807 117 HOH HOH . O 6 HOH A 108 808 118 HOH HOH . O 6 HOH A 109 809 119 HOH HOH . O 6 HOH A 110 810 120 HOH HOH . O 6 HOH A 111 811 121 HOH HOH . O 6 HOH A 112 812 122 HOH HOH . O 6 HOH A 113 813 123 HOH HOH . O 6 HOH A 114 814 124 HOH HOH . O 6 HOH A 115 815 125 HOH HOH . O 6 HOH A 116 816 126 HOH HOH . O 6 HOH A 117 817 128 HOH HOH . O 6 HOH A 118 818 129 HOH HOH . O 6 HOH A 119 819 130 HOH HOH . O 6 HOH A 120 820 131 HOH HOH . O 6 HOH A 121 821 133 HOH HOH . O 6 HOH A 122 822 135 HOH HOH . O 6 HOH A 123 823 136 HOH HOH . O 6 HOH A 124 824 137 HOH HOH . O 6 HOH A 125 825 138 HOH HOH . O 6 HOH A 126 826 139 HOH HOH . O 6 HOH A 127 827 140 HOH HOH . O 6 HOH A 128 828 142 HOH HOH . O 6 HOH A 129 829 143 HOH HOH . O 6 HOH A 130 830 144 HOH HOH . O 6 HOH A 131 831 145 HOH HOH . O 6 HOH A 132 832 146 HOH HOH . O 6 HOH A 133 833 147 HOH HOH . O 6 HOH A 134 834 148 HOH HOH . O 6 HOH A 135 835 149 HOH HOH . O 6 HOH A 136 836 151 HOH HOH . O 6 HOH A 137 837 155 HOH HOH . O 6 HOH A 138 838 158 HOH HOH . O 6 HOH A 139 839 159 HOH HOH . O 6 HOH A 140 840 162 HOH HOH . O 6 HOH A 141 841 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLB . . . M 4 18.075 -13.918 11.862 1 58.2 ? C1 OLB 612 A 1 HETATM 2 C C2 OLB . . . M 4 18.99 -13.562 10.737 1 57.34 ? C2 OLB 612 A 1 HETATM 3 C C3 OLB . . . M 4 19.159 -14.541 9.627 1 57.19 ? C3 OLB 612 A 1 HETATM 4 C C4 OLB . . . M 4 18.242 -14.389 8.457 1 56.94 ? C4 OLB 612 A 1 HETATM 5 C C5 OLB . . . M 4 18.796 -14.629 7.096 1 55.78 ? C5 OLB 612 A 1 HETATM 6 O O19 OLB . . . M 4 17.922 -15.1 12.143 1 60.25 ? O19 OLB 612 A 1 HETATM 7 O O20 OLB . . . M 4 17.103 -13.009 12.228 1 56.04 ? O20 OLB 612 A 1 HETATM 8 C C21 OLB . . . M 4 17.13 -12.417 13.473 1 53.55 ? C21 OLB 612 A 1 HETATM 9 C C22 OLB . . . M 4 18.471 -12.158 14.076 1 48.69 ? C22 OLB 612 A 1 HETATM 10 O O23 OLB . . . M 4 18.599 -10.821 14.376 1 39.84 ? O23 OLB 612 A 1 HETATM 11 C C24 OLB . . . M 4 18.652 -12.976 15.308 1 50.53 ? C24 OLB 612 A 1 HETATM 12 O O25 OLB . . . M 4 17.524 -13.532 15.867 1 52.48 ? O25 OLB 612 A 1 HETATM 13 C C6 OLB . . . M 4 18.079 -15.602 6.224 1 55.79 ? C6 OLB 612 A 1 HETATM 14 C C7 OLB . . . M 4 18.738 -16.021 4.951 1 56.36 ? C7 OLB 612 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #