data_4IKW # _model_server_result.job_id aPe1QspU7wl675SavOSopg _model_server_result.datetime_utc '2024-11-21 14:55:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ikw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":620}' # _entry.id 4IKW # _exptl.entry_id 4IKW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.33 _cell.angle_gamma 90 _cell.entry_id 4IKW _cell.length_a 52.505 _cell.length_b 93.732 _cell.length_c 57.265 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IKW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 R N N ? 5 S N N ? 5 T N N ? 5 U N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 290 n n C10 C9 OLC doub 291 n n C10 C11 OLC sing 292 n n C9 C8 OLC sing 293 n n C17 C16 OLC sing 294 z n C11 C12 OLC sing 295 n n C8 C7 OLC sing 296 n n C24 C22 OLC sing 297 n n C24 O25 OLC sing 298 n n C16 C15 OLC sing 299 n n C12 C13 OLC sing 300 n n C7 C6 OLC sing 301 n n C15 C14 OLC sing 302 n n C13 C14 OLC sing 303 n n C6 C5 OLC sing 304 n n C5 C4 OLC sing 305 n n C4 C3 OLC sing 306 n n C3 C2 OLC sing 307 n n C2 C1 OLC sing 308 n n C21 C22 OLC sing 309 n n C21 O20 OLC sing 310 n n C1 O19 OLC doub 311 n n C1 O20 OLC sing 312 n n C22 O23 OLC sing 313 n n C18 H18 OLC sing 314 n n C18 H18A OLC sing 315 n n C18 H18B OLC sing 316 n n C10 H10 OLC sing 317 n n C9 H9 OLC sing 318 n n C17 H17 OLC sing 319 n n C17 H17A OLC sing 320 n n C11 H11 OLC sing 321 n n C11 H11A OLC sing 322 n n C8 H8 OLC sing 323 n n C8 H8A OLC sing 324 n n C24 H24 OLC sing 325 n n C24 H24A OLC sing 326 n n C16 H16 OLC sing 327 n n C16 H16A OLC sing 328 n n C12 H12 OLC sing 329 n n C12 H12A OLC sing 330 n n C7 H7 OLC sing 331 n n C7 H7A OLC sing 332 n n C15 H15 OLC sing 333 n n C15 H15A OLC sing 334 n n C13 H13 OLC sing 335 n n C13 H13A OLC sing 336 n n C6 H6 OLC sing 337 n n C6 H6A OLC sing 338 n n C14 H14 OLC sing 339 n n C14 H14A OLC sing 340 n n C5 H5 OLC sing 341 n n C5 H5A OLC sing 342 n n C4 H4 OLC sing 343 n n C4 H4A OLC sing 344 n n C3 H3 OLC sing 345 n n C3 H3A OLC sing 346 n n C2 H2 OLC sing 347 n n C2 H2A OLC sing 348 n n C21 H21 OLC sing 349 n n C21 H21A OLC sing 350 n n C22 H22 OLC sing 351 n n O25 HO25 OLC sing 352 n n O23 HO23 OLC sing 353 n n # _atom_sites.entry_id 4IKW _atom_sites.fract_transf_matrix[1][1] 0.019046 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007823 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 601 1 SO4 SO4 . C 2 SO4 A 1 602 2 SO4 SO4 . D 2 SO4 A 1 603 3 SO4 SO4 . E 2 SO4 A 1 604 4 SO4 SO4 . F 2 SO4 A 1 605 5 SO4 SO4 . G 2 SO4 A 1 606 6 SO4 SO4 . H 2 SO4 A 1 607 7 SO4 SO4 . I 3 PG4 A 1 608 8 PG4 PG4 . J 4 OLA A 1 609 1 OLA OLA . K 4 OLA A 1 610 2 OLA OLA . L 4 OLA A 1 611 4 OLA OLA . M 4 OLA A 1 612 5 OLA OLA . N 4 OLA A 1 613 7 OLA OLA . O 4 OLA A 1 614 8 OLA OLA . P 4 OLA A 1 615 9 OLA OLA . Q 4 OLA A 1 616 10 OLA OLA . R 5 OLC A 1 617 11 OLC OLC . S 5 OLC A 1 618 12 OLC OLC . T 5 OLC A 1 619 13 OLC OLC . U 5 OLC A 1 620 14 OLC OLC . V 6 HOH A 1 701 1 HOH HOH . V 6 HOH A 2 702 2 HOH HOH . V 6 HOH A 3 703 3 HOH HOH . V 6 HOH A 4 704 4 HOH HOH . V 6 HOH A 5 705 5 HOH HOH . V 6 HOH A 6 706 6 HOH HOH . V 6 HOH A 7 707 7 HOH HOH . V 6 HOH A 8 708 8 HOH HOH . V 6 HOH A 9 709 9 HOH HOH . V 6 HOH A 10 710 10 HOH HOH . V 6 HOH A 11 711 11 HOH HOH . V 6 HOH A 12 712 12 HOH HOH . V 6 HOH A 13 713 13 HOH HOH . V 6 HOH A 14 714 14 HOH HOH . V 6 HOH A 15 715 15 HOH HOH . V 6 HOH A 16 716 16 HOH HOH . V 6 HOH A 17 717 17 HOH HOH . V 6 HOH A 18 718 18 HOH HOH . V 6 HOH A 19 719 19 HOH HOH . V 6 HOH A 20 720 20 HOH HOH . V 6 HOH A 21 721 22 HOH HOH . V 6 HOH A 22 722 23 HOH HOH . V 6 HOH A 23 723 24 HOH HOH . V 6 HOH A 24 724 25 HOH HOH . V 6 HOH A 25 725 26 HOH HOH . V 6 HOH A 26 726 27 HOH HOH . V 6 HOH A 27 727 28 HOH HOH . V 6 HOH A 28 728 29 HOH HOH . V 6 HOH A 29 729 30 HOH HOH . V 6 HOH A 30 730 31 HOH HOH . V 6 HOH A 31 731 32 HOH HOH . V 6 HOH A 32 732 33 HOH HOH . V 6 HOH A 33 733 34 HOH HOH . V 6 HOH A 34 734 35 HOH HOH . V 6 HOH A 35 735 36 HOH HOH . V 6 HOH A 36 736 37 HOH HOH . V 6 HOH A 37 737 38 HOH HOH . V 6 HOH A 38 738 39 HOH HOH . V 6 HOH A 39 739 40 HOH HOH . V 6 HOH A 40 740 41 HOH HOH . V 6 HOH A 41 741 42 HOH HOH . V 6 HOH A 42 742 43 HOH HOH . V 6 HOH A 43 743 44 HOH HOH . V 6 HOH A 44 744 45 HOH HOH . V 6 HOH A 45 745 46 HOH HOH . V 6 HOH A 46 746 47 HOH HOH . V 6 HOH A 47 747 48 HOH HOH . V 6 HOH A 48 748 49 HOH HOH . V 6 HOH A 49 749 50 HOH HOH . V 6 HOH A 50 750 51 HOH HOH . V 6 HOH A 51 751 52 HOH HOH . V 6 HOH A 52 752 53 HOH HOH . V 6 HOH A 53 753 54 HOH HOH . V 6 HOH A 54 754 55 HOH HOH . V 6 HOH A 55 755 56 HOH HOH . V 6 HOH A 56 756 57 HOH HOH . V 6 HOH A 57 757 58 HOH HOH . V 6 HOH A 58 758 59 HOH HOH . V 6 HOH A 59 759 60 HOH HOH . V 6 HOH A 60 760 61 HOH HOH . V 6 HOH A 61 761 62 HOH HOH . V 6 HOH A 62 762 63 HOH HOH . V 6 HOH A 63 763 65 HOH HOH . V 6 HOH A 64 764 66 HOH HOH . V 6 HOH A 65 765 67 HOH HOH . V 6 HOH A 66 766 68 HOH HOH . V 6 HOH A 67 767 69 HOH HOH . V 6 HOH A 68 768 70 HOH HOH . V 6 HOH A 69 769 71 HOH HOH . V 6 HOH A 70 770 72 HOH HOH . V 6 HOH A 71 771 73 HOH HOH . V 6 HOH A 72 772 74 HOH HOH . V 6 HOH A 73 773 75 HOH HOH . V 6 HOH A 74 774 76 HOH HOH . V 6 HOH A 75 775 79 HOH HOH . V 6 HOH A 76 776 80 HOH HOH . V 6 HOH A 77 777 81 HOH HOH . V 6 HOH A 78 778 82 HOH HOH . V 6 HOH A 79 779 83 HOH HOH . V 6 HOH A 80 780 84 HOH HOH . V 6 HOH A 81 781 85 HOH HOH . V 6 HOH A 82 782 87 HOH HOH . V 6 HOH A 83 783 88 HOH HOH . V 6 HOH A 84 784 89 HOH HOH . V 6 HOH A 85 785 90 HOH HOH . V 6 HOH A 86 786 91 HOH HOH . V 6 HOH A 87 787 92 HOH HOH . V 6 HOH A 88 788 93 HOH HOH . V 6 HOH A 89 789 96 HOH HOH . V 6 HOH A 90 790 97 HOH HOH . V 6 HOH A 91 791 98 HOH HOH . V 6 HOH A 92 792 100 HOH HOH . V 6 HOH A 93 793 101 HOH HOH . V 6 HOH A 94 794 103 HOH HOH . V 6 HOH A 95 795 104 HOH HOH . V 6 HOH A 96 796 105 HOH HOH . V 6 HOH A 97 797 106 HOH HOH . V 6 HOH A 98 798 107 HOH HOH . V 6 HOH A 99 799 108 HOH HOH . V 6 HOH A 100 800 110 HOH HOH . V 6 HOH A 101 801 111 HOH HOH . V 6 HOH A 102 802 112 HOH HOH . V 6 HOH A 103 803 113 HOH HOH . V 6 HOH A 104 804 114 HOH HOH . V 6 HOH A 105 805 115 HOH HOH . V 6 HOH A 106 806 116 HOH HOH . V 6 HOH A 107 807 119 HOH HOH . V 6 HOH A 108 808 120 HOH HOH . V 6 HOH A 109 809 121 HOH HOH . V 6 HOH A 110 810 123 HOH HOH . V 6 HOH A 111 811 125 HOH HOH . V 6 HOH A 112 812 126 HOH HOH . V 6 HOH A 113 813 127 HOH HOH . V 6 HOH A 114 814 129 HOH HOH . V 6 HOH A 115 815 130 HOH HOH . V 6 HOH A 116 816 132 HOH HOH . V 6 HOH A 117 817 133 HOH HOH . V 6 HOH A 118 818 134 HOH HOH . V 6 HOH A 119 819 136 HOH HOH . V 6 HOH A 120 820 137 HOH HOH . V 6 HOH A 121 821 138 HOH HOH . V 6 HOH A 122 822 139 HOH HOH . V 6 HOH A 123 823 143 HOH HOH . V 6 HOH A 124 824 145 HOH HOH . V 6 HOH A 125 825 147 HOH HOH . V 6 HOH A 126 826 153 HOH HOH . V 6 HOH A 127 827 154 HOH HOH . V 6 HOH A 128 828 155 HOH HOH . V 6 HOH A 129 829 157 HOH HOH . V 6 HOH A 130 830 158 HOH HOH . V 6 HOH A 131 831 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C24 OLC . . . U 5 17.976 -11.929 13.956 1 37.59 ? C24 OLC 620 A 1 HETATM 2 C C7 OLC . . . U 5 18.956 -19.381 6.288 1 55.74 ? C7 OLC 620 A 1 HETATM 3 C C6 OLC . . . U 5 19.361 -17.965 6.554 1 57.06 ? C6 OLC 620 A 1 HETATM 4 C C5 OLC . . . U 5 18.898 -17.541 7.91 1 56.89 ? C5 OLC 620 A 1 HETATM 5 C C4 OLC . . . U 5 19.342 -16.14 8.183 1 56.94 ? C4 OLC 620 A 1 HETATM 6 C C3 OLC . . . U 5 18.346 -15.426 9.042 1 56.14 ? C3 OLC 620 A 1 HETATM 7 C C2 OLC . . . U 5 18.994 -14.318 9.809 1 54.36 ? C2 OLC 620 A 1 HETATM 8 C C21 OLC . . . U 5 18.51 -14.273 13.545 1 47.45 ? C21 OLC 620 A 1 HETATM 9 C C1 OLC . . . U 5 19.054 -14.69 11.254 1 54.14 ? C1 OLC 620 A 1 HETATM 10 C C22 OLC . . . U 5 18.711 -13.118 14.472 1 41.54 ? C22 OLC 620 A 1 HETATM 11 O O19 OLC . . . U 5 19.302 -15.849 11.547 1 56.92 ? O19 OLC 620 A 1 HETATM 12 O O25 OLC . . . U 5 18.648 -10.802 14.382 1 32.07 ? O25 OLC 620 A 1 HETATM 13 O O23 OLC . . . U 5 18.243 -13.406 15.736 1 40.34 ? O23 OLC 620 A 1 HETATM 14 O O20 OLC . . . U 5 18.554 -13.848 12.226 1 51.05 ? O20 OLC 620 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #