data_4IL4 # _model_server_result.job_id 1RoVgHJLLpDr1sOpYNbvwQ _model_server_result.datetime_utc '2024-11-27 11:11:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4il4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"FA","auth_seq_id":403}' # _entry.id 4IL4 # _exptl.entry_id 4IL4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.7 _cell.angle_gamma 90 _cell.entry_id 4IL4 _cell.length_a 182.069 _cell.length_b 132.491 _cell.length_c 160.219 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N ? 4 P N N ? 4 U N N ? 4 Z N N ? 4 FA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 71 A ILE 71 1_555 J NA NA . A NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc2 B O ILE 71 B ILE 71 1_555 P NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc3 C O ILE 71 C ILE 71 1_555 U NA NA . C NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? metalc ? metalc4 D O ILE 71 D ILE 71 1_555 Z NA NA . D NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc5 E O ILE 71 E ILE 71 1_555 FA NA NA . E NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4IL4 _atom_sites.fract_transf_matrix[1][1] 0.005492 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001238 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007548 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006398 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 ACT A 1 401 4 ACT ACT . G 3 CL A 1 402 3 CL CL . H 3 CL A 1 403 6 CL CL . I 3 CL A 1 404 8 CL CL . J 4 NA A 1 405 9 NA NA . K 4 NA A 1 406 14 NA NA . L 2 ACT A 1 407 1 ACT ACT . M 5 LSM A 1 408 4 LSM LSM . N 2 ACT B 1 401 3 ACT ACT . O 3 CL B 1 402 4 CL CL . P 4 NA B 1 403 10 NA NA . Q 2 ACT B 1 404 4 ACT ACT . R 5 LSM B 1 405 5 LSM LSM . S 2 ACT C 1 401 2 ACT ACT . T 3 CL C 1 402 5 CL CL . U 4 NA C 1 403 11 NA NA . V 2 ACT C 1 404 5 ACT ACT . W 5 LSM C 1 405 6 LSM LSM . X 2 ACT D 1 401 1 ACT ACT . Y 3 CL D 1 402 1 CL CL . Z 4 NA D 1 403 12 NA NA . AA 2 ACT D 1 404 2 ACT ACT . BA 5 LSM D 1 405 1 LSM LSM . CA 5 LSM D 1 406 2 LSM LSM . DA 2 ACT E 1 401 5 ACT ACT . EA 3 CL E 1 402 2 CL CL . FA 4 NA E 1 403 13 NA NA . GA 2 ACT E 1 404 3 ACT ACT . HA 5 LSM E 1 405 3 LSM LSM . IA 6 HOH A 1 501 13 HOH HOH . IA 6 HOH A 2 502 24 HOH HOH . IA 6 HOH A 3 503 25 HOH HOH . IA 6 HOH A 4 504 32 HOH HOH . JA 6 HOH B 1 501 2 HOH HOH . JA 6 HOH B 2 502 3 HOH HOH . JA 6 HOH B 3 503 4 HOH HOH . JA 6 HOH B 4 504 5 HOH HOH . JA 6 HOH B 5 505 6 HOH HOH . JA 6 HOH B 6 506 7 HOH HOH . JA 6 HOH B 7 507 8 HOH HOH . JA 6 HOH B 8 508 15 HOH HOH . JA 6 HOH B 9 509 21 HOH HOH . JA 6 HOH B 10 510 26 HOH HOH . JA 6 HOH B 11 511 30 HOH HOH . KA 6 HOH C 1 501 11 HOH HOH . KA 6 HOH C 2 502 12 HOH HOH . KA 6 HOH C 3 503 19 HOH HOH . KA 6 HOH C 4 504 20 HOH HOH . KA 6 HOH C 5 505 27 HOH HOH . LA 6 HOH D 1 501 10 HOH HOH . LA 6 HOH D 2 502 14 HOH HOH . LA 6 HOH D 3 503 23 HOH HOH . LA 6 HOH D 4 504 28 HOH HOH . LA 6 HOH D 5 505 31 HOH HOH . MA 6 HOH E 1 501 1 HOH HOH . MA 6 HOH E 2 502 9 HOH HOH . MA 6 HOH E 3 503 16 HOH HOH . MA 6 HOH E 4 504 17 HOH HOH . MA 6 HOH E 5 505 22 HOH HOH . MA 6 HOH E 6 506 29 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id FA _atom_site.label_entity_id 4 _atom_site.Cartn_x 43.447 _atom_site.Cartn_y -17.268 _atom_site.Cartn_z -10.993 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 100.22 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 403 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #