data_4IL9 # _model_server_result.job_id ArOofCUwtEkIkEJSZPTdvA _model_server_result.datetime_utc '2024-11-23 10:03:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4il9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"FB","auth_seq_id":409}' # _entry.id 4IL9 # _exptl.entry_id 4IL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.16 _cell.angle_gamma 90 _cell.entry_id 4IL9 _cell.length_a 180.52 _cell.length_b 132.14 _cell.length_c 159.96 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 O N N ? 6 Z N N ? 6 JA N N ? 6 KA N N ? 6 VA N N ? 6 FB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PRO 72 A PRO 68 1_555 Q NA NA . A NA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.165 ? metalc ? metalc2 A O ILE 75 A ILE 71 1_555 Q NA NA . A NA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc3 B O ILE 75 B ILE 71 1_555 AA NA NA . B NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc4 C O PRO 72 C PRO 68 1_555 LA NA NA . C NA 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc5 C O ILE 75 C ILE 71 1_555 LA NA NA . C NA 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc6 D O ILE 75 D ILE 71 1_555 WA NA NA . D NA 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc7 E O PRO 72 E PRO 68 1_555 GB NA NA . E NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.001 ? metalc ? metalc8 E O ILE 75 E ILE 71 1_555 GB NA NA . E NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 200 n n C1B O1B LMT sing 201 n n C1B O5B LMT sing 202 n n C1B H1B LMT sing 203 n n C2B C3B LMT sing 204 n n C2B O2B LMT sing 205 n n C2B H2B LMT sing 206 n n C3B C4B LMT sing 207 n n C3B O3B LMT sing 208 n n C3B H3B LMT sing 209 n n C4B C5B LMT sing 210 n n C4B O4' LMT sing 211 n n C4B H4B LMT sing 212 n n C5B C6B LMT sing 213 n n C5B O5B LMT sing 214 n n C5B H5B LMT sing 215 n n C6B O6B LMT sing 216 n n C6B "H6'2" LMT sing 217 n n C6B "H6'1" LMT sing 218 n n O1B C4' LMT sing 219 n n O2B H2O1 LMT sing 220 n n O3B H3O1 LMT sing 221 n n O4' H4O1 LMT sing 222 n n O6B H6B LMT sing 223 n n C1' C2' LMT sing 224 n n C1' O1' LMT sing 225 n n C1' O5' LMT sing 226 n n C1' H1' LMT sing 227 n n C2' C3' LMT sing 228 n n C2' O2' LMT sing 229 n n C2' H2' LMT sing 230 n n C3' C4' LMT sing 231 n n C3' O3' LMT sing 232 n n C3' H3' LMT sing 233 n n C4' C5' LMT sing 234 n n C4' H4' LMT sing 235 n n C5' C6' LMT sing 236 n n C5' O5' LMT sing 237 n n C5' H5' LMT sing 238 n n C6' O6' LMT sing 239 n n C6' H6D LMT sing 240 n n C6' H6E LMT sing 241 n n O1' C1 LMT sing 242 n n O2' H2O2 LMT sing 243 n n O3' H3O2 LMT sing 244 n n O6' H6' LMT sing 245 n n C1 C2 LMT sing 246 n n C1 H12 LMT sing 247 n n C1 H11 LMT sing 248 n n C2 C3 LMT sing 249 n n C2 H22 LMT sing 250 n n C2 H21 LMT sing 251 n n C3 C4 LMT sing 252 n n C3 H32 LMT sing 253 n n C3 H31 LMT sing 254 n n C4 C5 LMT sing 255 n n C4 H42 LMT sing 256 n n C4 H41 LMT sing 257 n n C5 C6 LMT sing 258 n n C5 H52 LMT sing 259 n n C5 H51 LMT sing 260 n n C6 C7 LMT sing 261 n n C6 H62 LMT sing 262 n n C6 H61 LMT sing 263 n n C7 C8 LMT sing 264 n n C7 H72 LMT sing 265 n n C7 H71 LMT sing 266 n n C8 C9 LMT sing 267 n n C8 H82 LMT sing 268 n n C8 H81 LMT sing 269 n n C9 C10 LMT sing 270 n n C9 H92 LMT sing 271 n n C9 H91 LMT sing 272 n n C10 C11 LMT sing 273 n n C10 H102 LMT sing 274 n n C10 H101 LMT sing 275 n n C11 C12 LMT sing 276 n n C11 H112 LMT sing 277 n n C11 H111 LMT sing 278 n n C12 H123 LMT sing 279 n n C12 H122 LMT sing 280 n n C12 H121 LMT sing 281 n n # _atom_sites.entry_id 4IL9 _atom_sites.fract_transf_matrix[1][1] 0.00554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001194 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007568 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 ACT A 1 401 4 ACT ACT . G 2 ACT A 1 402 6 ACT ACT . H 3 PLC A 1 403 1 PLC PLC . I 3 PLC A 1 404 3 PLC PLC . J 4 UNL A 1 405 5 UNL UNK . K 4 UNL A 1 406 6 UNL UNK . L 5 BR A 1 407 2 BR BR . M 5 BR A 1 408 7 BR BR . N 5 BR A 1 409 11 BR BR . O 6 LMT A 1 410 5 LMT LMT . P 7 NA A 1 411 1 NA NA . Q 7 NA A 1 412 3 NA NA . R 2 ACT B 1 401 3 ACT ACT . S 2 ACT B 1 402 9 ACT ACT . T 3 PLC B 1 403 4 PLC PLC . U 3 PLC B 1 404 6 PLC PLC . V 4 UNL B 1 405 1 UNL UNK . W 4 UNL B 1 406 7 UNL UNK . X 5 BR B 1 407 1 BR BR . Y 5 BR B 1 408 12 BR BR . Z 6 LMT B 1 409 6 LMT LMT . AA 7 NA B 1 410 4 NA NA . BA 2 ACT C 1 401 2 ACT ACT . CA 2 ACT C 1 402 10 ACT ACT . DA 3 PLC C 1 403 7 PLC PLC . EA 3 PLC C 1 404 9 PLC PLC . FA 4 UNL C 1 405 2 UNL UNK . GA 4 UNL C 1 406 8 UNL UNK . HA 5 BR C 1 407 5 BR BR . IA 5 BR C 1 408 8 BR BR . JA 6 LMT C 1 409 1 LMT LMT . KA 6 LMT C 1 410 4 LMT LMT . LA 7 NA C 1 411 5 NA NA . MA 2 ACT D 1 401 1 ACT ACT . NA 2 ACT D 1 402 7 ACT ACT . OA 3 PLC D 1 403 10 PLC PLC . PA 3 PLC D 1 404 12 PLC PLC . QA 4 UNL D 1 405 3 UNL UNK . RA 4 UNL D 1 406 9 UNL UNK . SA 5 BR D 1 407 4 BR BR . TA 5 BR D 1 408 6 BR BR . UA 5 BR D 1 409 9 BR BR . VA 6 LMT D 1 410 2 LMT LMT . WA 7 NA D 1 411 6 NA NA . XA 2 ACT E 1 401 5 ACT ACT . YA 2 ACT E 1 402 8 ACT ACT . ZA 3 PLC E 1 403 13 PLC PLC . AB 3 PLC E 1 404 15 PLC PLC . BB 4 UNL E 1 405 4 UNL UNK . CB 4 UNL E 1 406 10 UNL UNK . DB 5 BR E 1 407 3 BR BR . EB 5 BR E 1 408 10 BR BR . FB 6 LMT E 1 409 3 LMT LMT . GB 7 NA E 1 410 2 NA NA . HB 8 HOH A 1 501 1 HOH HOH . HB 8 HOH A 2 502 3 HOH HOH . HB 8 HOH A 3 503 4 HOH HOH . HB 8 HOH A 4 504 5 HOH HOH . HB 8 HOH A 5 505 13 HOH HOH . HB 8 HOH A 6 506 36 HOH HOH . HB 8 HOH A 7 507 39 HOH HOH . HB 8 HOH A 8 508 49 HOH HOH . HB 8 HOH A 9 509 50 HOH HOH . HB 8 HOH A 10 510 51 HOH HOH . HB 8 HOH A 11 511 54 HOH HOH . HB 8 HOH A 12 512 55 HOH HOH . HB 8 HOH A 13 513 70 HOH HOH . HB 8 HOH A 14 514 73 HOH HOH . HB 8 HOH A 15 515 82 HOH HOH . HB 8 HOH A 16 516 92 HOH HOH . HB 8 HOH A 17 517 94 HOH HOH . IB 8 HOH B 1 501 8 HOH HOH . IB 8 HOH B 2 502 10 HOH HOH . IB 8 HOH B 3 503 11 HOH HOH . IB 8 HOH B 4 504 12 HOH HOH . IB 8 HOH B 5 505 14 HOH HOH . IB 8 HOH B 6 506 47 HOH HOH . IB 8 HOH B 7 507 59 HOH HOH . IB 8 HOH B 8 508 61 HOH HOH . IB 8 HOH B 9 509 62 HOH HOH . IB 8 HOH B 10 510 77 HOH HOH . IB 8 HOH B 11 511 78 HOH HOH . IB 8 HOH B 12 512 79 HOH HOH . IB 8 HOH B 13 513 80 HOH HOH . IB 8 HOH B 14 514 81 HOH HOH . IB 8 HOH B 15 515 83 HOH HOH . IB 8 HOH B 16 516 93 HOH HOH . IB 8 HOH B 17 517 98 HOH HOH . IB 8 HOH B 18 518 101 HOH HOH . JB 8 HOH C 1 501 15 HOH HOH . JB 8 HOH C 2 502 16 HOH HOH . JB 8 HOH C 3 503 17 HOH HOH . JB 8 HOH C 4 504 18 HOH HOH . JB 8 HOH C 5 505 19 HOH HOH . JB 8 HOH C 6 506 20 HOH HOH . JB 8 HOH C 7 507 21 HOH HOH . JB 8 HOH C 8 508 22 HOH HOH . JB 8 HOH C 9 509 23 HOH HOH . JB 8 HOH C 10 510 24 HOH HOH . JB 8 HOH C 11 511 25 HOH HOH . JB 8 HOH C 12 512 26 HOH HOH . JB 8 HOH C 13 513 57 HOH HOH . JB 8 HOH C 14 514 58 HOH HOH . JB 8 HOH C 15 515 67 HOH HOH . JB 8 HOH C 16 516 74 HOH HOH . JB 8 HOH C 17 517 75 HOH HOH . JB 8 HOH C 18 518 84 HOH HOH . JB 8 HOH C 19 519 89 HOH HOH . JB 8 HOH C 20 520 95 HOH HOH . JB 8 HOH C 21 521 97 HOH HOH . JB 8 HOH C 22 522 99 HOH HOH . JB 8 HOH C 23 523 100 HOH HOH . KB 8 HOH D 1 501 28 HOH HOH . KB 8 HOH D 2 502 30 HOH HOH . KB 8 HOH D 3 503 31 HOH HOH . KB 8 HOH D 4 504 32 HOH HOH . KB 8 HOH D 5 505 33 HOH HOH . KB 8 HOH D 6 506 34 HOH HOH . KB 8 HOH D 7 507 46 HOH HOH . KB 8 HOH D 8 508 52 HOH HOH . KB 8 HOH D 9 509 65 HOH HOH . KB 8 HOH D 10 510 66 HOH HOH . KB 8 HOH D 11 511 68 HOH HOH . KB 8 HOH D 12 512 69 HOH HOH . KB 8 HOH D 13 513 71 HOH HOH . KB 8 HOH D 14 514 86 HOH HOH . KB 8 HOH D 15 515 88 HOH HOH . KB 8 HOH D 16 516 90 HOH HOH . LB 8 HOH E 1 501 35 HOH HOH . LB 8 HOH E 2 502 38 HOH HOH . LB 8 HOH E 3 503 41 HOH HOH . LB 8 HOH E 4 504 43 HOH HOH . LB 8 HOH E 5 505 44 HOH HOH . LB 8 HOH E 6 506 45 HOH HOH . LB 8 HOH E 7 507 48 HOH HOH . LB 8 HOH E 8 508 53 HOH HOH . LB 8 HOH E 9 509 63 HOH HOH . LB 8 HOH E 10 510 72 HOH HOH . LB 8 HOH E 11 511 85 HOH HOH . LB 8 HOH E 12 512 87 HOH HOH . LB 8 HOH E 13 513 91 HOH HOH . LB 8 HOH E 14 514 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LMT . . . FB 6 53.716 -22.148 35.539 1 68.62 ? C1 LMT 409 E 1 HETATM 2 C C2 LMT . . . FB 6 55.127 -22.39 36.125 1 69.71 ? C2 LMT 409 E 1 HETATM 3 C C3 LMT . . . FB 6 55.152 -22.776 37.621 1 68.76 ? C3 LMT 409 E 1 HETATM 4 C C4 LMT . . . FB 6 56.616 -22.976 38.037 1 70.74 ? C4 LMT 409 E 1 HETATM 5 C C5 LMT . . . FB 6 56.758 -23.305 39.523 1 73.22 ? C5 LMT 409 E 1 HETATM 6 C C6 LMT . . . FB 6 58.156 -23.802 39.839 1 76.16 ? C6 LMT 409 E 1 HETATM 7 C C7 LMT . . . FB 6 58.153 -24.264 41.281 1 81.62 ? C7 LMT 409 E 1 HETATM 8 C C8 LMT . . . FB 6 59.414 -25.097 41.558 1 86.13 ? C8 LMT 409 E 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 37 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 8 #