data_4IL9
#
_model_server_result.job_id            lwiIQxBkAnf6udPOVurzhg 
_model_server_result.datetime_utc      '2024-11-21 14:36:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4il9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AA","auth_seq_id":410}' 
#
_entry.id    4IL9 
#
_exptl.entry_id    4IL9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.16 
_cell.angle_gamma         90 
_cell.entry_id            4IL9 
_cell.length_a            180.52 
_cell.length_b            132.14 
_cell.length_c            159.96 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IL9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 P N N 
? 7 Q N N 
? 7 AA N N 
? 7 LA N N 
? 7 WA N N 
? 7 GB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O PRO 72 A PRO 68 1_555 Q NA NA . A NA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.165 ? 
metalc ? metalc2 A O ILE 75 A ILE 71 1_555 Q NA NA . A NA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? 
metalc ? metalc3 B O ILE 75 B ILE 71 1_555 AA NA NA . B NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc4 C O PRO 72 C PRO 68 1_555 LA NA NA . C NA 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? 
metalc ? metalc5 C O ILE 75 C ILE 71 1_555 LA NA NA . C NA 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? 
metalc ? metalc6 D O ILE 75 D ILE 71 1_555 WA NA NA . D NA 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? 
metalc ? metalc7 E O PRO 72 E PRO 68 1_555 GB NA NA . E NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.001 ? 
metalc ? metalc8 E O ILE 75 E ILE 71 1_555 GB NA NA . E NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4IL9 
_atom_sites.fract_transf_matrix[1][1]    0.00554 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001194 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007568 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006395 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 ACT A 1 401 4 ACT ACT . 
G 2 ACT A 1 402 6 ACT ACT . 
H 3 PLC A 1 403 1 PLC PLC . 
I 3 PLC A 1 404 3 PLC PLC . 
J 4 UNL A 1 405 5 UNL UNK . 
K 4 UNL A 1 406 6 UNL UNK . 
L 5 BR A 1 407 2 BR BR . 
M 5 BR A 1 408 7 BR BR . 
N 5 BR A 1 409 11 BR BR . 
O 6 LMT A 1 410 5 LMT LMT . 
P 7 NA A 1 411 1 NA NA . 
Q 7 NA A 1 412 3 NA NA . 
R 2 ACT B 1 401 3 ACT ACT . 
S 2 ACT B 1 402 9 ACT ACT . 
T 3 PLC B 1 403 4 PLC PLC . 
U 3 PLC B 1 404 6 PLC PLC . 
V 4 UNL B 1 405 1 UNL UNK . 
W 4 UNL B 1 406 7 UNL UNK . 
X 5 BR B 1 407 1 BR BR . 
Y 5 BR B 1 408 12 BR BR . 
Z 6 LMT B 1 409 6 LMT LMT . 
AA 7 NA B 1 410 4 NA NA . 
BA 2 ACT C 1 401 2 ACT ACT . 
CA 2 ACT C 1 402 10 ACT ACT . 
DA 3 PLC C 1 403 7 PLC PLC . 
EA 3 PLC C 1 404 9 PLC PLC . 
FA 4 UNL C 1 405 2 UNL UNK . 
GA 4 UNL C 1 406 8 UNL UNK . 
HA 5 BR C 1 407 5 BR BR . 
IA 5 BR C 1 408 8 BR BR . 
JA 6 LMT C 1 409 1 LMT LMT . 
KA 6 LMT C 1 410 4 LMT LMT . 
LA 7 NA C 1 411 5 NA NA . 
MA 2 ACT D 1 401 1 ACT ACT . 
NA 2 ACT D 1 402 7 ACT ACT . 
OA 3 PLC D 1 403 10 PLC PLC . 
PA 3 PLC D 1 404 12 PLC PLC . 
QA 4 UNL D 1 405 3 UNL UNK . 
RA 4 UNL D 1 406 9 UNL UNK . 
SA 5 BR D 1 407 4 BR BR . 
TA 5 BR D 1 408 6 BR BR . 
UA 5 BR D 1 409 9 BR BR . 
VA 6 LMT D 1 410 2 LMT LMT . 
WA 7 NA D 1 411 6 NA NA . 
XA 2 ACT E 1 401 5 ACT ACT . 
YA 2 ACT E 1 402 8 ACT ACT . 
ZA 3 PLC E 1 403 13 PLC PLC . 
AB 3 PLC E 1 404 15 PLC PLC . 
BB 4 UNL E 1 405 4 UNL UNK . 
CB 4 UNL E 1 406 10 UNL UNK . 
DB 5 BR E 1 407 3 BR BR . 
EB 5 BR E 1 408 10 BR BR . 
FB 6 LMT E 1 409 3 LMT LMT . 
GB 7 NA E 1 410 2 NA NA . 
HB 8 HOH A 1 501 1 HOH HOH . 
HB 8 HOH A 2 502 3 HOH HOH . 
HB 8 HOH A 3 503 4 HOH HOH . 
HB 8 HOH A 4 504 5 HOH HOH . 
HB 8 HOH A 5 505 13 HOH HOH . 
HB 8 HOH A 6 506 36 HOH HOH . 
HB 8 HOH A 7 507 39 HOH HOH . 
HB 8 HOH A 8 508 49 HOH HOH . 
HB 8 HOH A 9 509 50 HOH HOH . 
HB 8 HOH A 10 510 51 HOH HOH . 
HB 8 HOH A 11 511 54 HOH HOH . 
HB 8 HOH A 12 512 55 HOH HOH . 
HB 8 HOH A 13 513 70 HOH HOH . 
HB 8 HOH A 14 514 73 HOH HOH . 
HB 8 HOH A 15 515 82 HOH HOH . 
HB 8 HOH A 16 516 92 HOH HOH . 
HB 8 HOH A 17 517 94 HOH HOH . 
IB 8 HOH B 1 501 8 HOH HOH . 
IB 8 HOH B 2 502 10 HOH HOH . 
IB 8 HOH B 3 503 11 HOH HOH . 
IB 8 HOH B 4 504 12 HOH HOH . 
IB 8 HOH B 5 505 14 HOH HOH . 
IB 8 HOH B 6 506 47 HOH HOH . 
IB 8 HOH B 7 507 59 HOH HOH . 
IB 8 HOH B 8 508 61 HOH HOH . 
IB 8 HOH B 9 509 62 HOH HOH . 
IB 8 HOH B 10 510 77 HOH HOH . 
IB 8 HOH B 11 511 78 HOH HOH . 
IB 8 HOH B 12 512 79 HOH HOH . 
IB 8 HOH B 13 513 80 HOH HOH . 
IB 8 HOH B 14 514 81 HOH HOH . 
IB 8 HOH B 15 515 83 HOH HOH . 
IB 8 HOH B 16 516 93 HOH HOH . 
IB 8 HOH B 17 517 98 HOH HOH . 
IB 8 HOH B 18 518 101 HOH HOH . 
JB 8 HOH C 1 501 15 HOH HOH . 
JB 8 HOH C 2 502 16 HOH HOH . 
JB 8 HOH C 3 503 17 HOH HOH . 
JB 8 HOH C 4 504 18 HOH HOH . 
JB 8 HOH C 5 505 19 HOH HOH . 
JB 8 HOH C 6 506 20 HOH HOH . 
JB 8 HOH C 7 507 21 HOH HOH . 
JB 8 HOH C 8 508 22 HOH HOH . 
JB 8 HOH C 9 509 23 HOH HOH . 
JB 8 HOH C 10 510 24 HOH HOH . 
JB 8 HOH C 11 511 25 HOH HOH . 
JB 8 HOH C 12 512 26 HOH HOH . 
JB 8 HOH C 13 513 57 HOH HOH . 
JB 8 HOH C 14 514 58 HOH HOH . 
JB 8 HOH C 15 515 67 HOH HOH . 
JB 8 HOH C 16 516 74 HOH HOH . 
JB 8 HOH C 17 517 75 HOH HOH . 
JB 8 HOH C 18 518 84 HOH HOH . 
JB 8 HOH C 19 519 89 HOH HOH . 
JB 8 HOH C 20 520 95 HOH HOH . 
JB 8 HOH C 21 521 97 HOH HOH . 
JB 8 HOH C 22 522 99 HOH HOH . 
JB 8 HOH C 23 523 100 HOH HOH . 
KB 8 HOH D 1 501 28 HOH HOH . 
KB 8 HOH D 2 502 30 HOH HOH . 
KB 8 HOH D 3 503 31 HOH HOH . 
KB 8 HOH D 4 504 32 HOH HOH . 
KB 8 HOH D 5 505 33 HOH HOH . 
KB 8 HOH D 6 506 34 HOH HOH . 
KB 8 HOH D 7 507 46 HOH HOH . 
KB 8 HOH D 8 508 52 HOH HOH . 
KB 8 HOH D 9 509 65 HOH HOH . 
KB 8 HOH D 10 510 66 HOH HOH . 
KB 8 HOH D 11 511 68 HOH HOH . 
KB 8 HOH D 12 512 69 HOH HOH . 
KB 8 HOH D 13 513 71 HOH HOH . 
KB 8 HOH D 14 514 86 HOH HOH . 
KB 8 HOH D 15 515 88 HOH HOH . 
KB 8 HOH D 16 516 90 HOH HOH . 
LB 8 HOH E 1 501 35 HOH HOH . 
LB 8 HOH E 2 502 38 HOH HOH . 
LB 8 HOH E 3 503 41 HOH HOH . 
LB 8 HOH E 4 504 43 HOH HOH . 
LB 8 HOH E 5 505 44 HOH HOH . 
LB 8 HOH E 6 506 45 HOH HOH . 
LB 8 HOH E 7 507 48 HOH HOH . 
LB 8 HOH E 8 508 53 HOH HOH . 
LB 8 HOH E 9 509 63 HOH HOH . 
LB 8 HOH E 10 510 72 HOH HOH . 
LB 8 HOH E 11 511 85 HOH HOH . 
LB 8 HOH E 12 512 87 HOH HOH . 
LB 8 HOH E 13 513 91 HOH HOH . 
LB 8 HOH E 14 514 102 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         AA 
_atom_site.label_entity_id       7 
_atom_site.Cartn_x               16.9 
_atom_site.Cartn_y               -25.269 
_atom_site.Cartn_z               2.817 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        67.08 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           410 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#