data_4ILB # _model_server_result.job_id VxO-xzaEngXSDrsqjyac-A _model_server_result.datetime_utc '2024-11-19 05:35:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ilb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AB","auth_seq_id":409}' # _entry.id 4ILB # _exptl.entry_id 4ILB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.09 _cell.angle_gamma 90 _cell.entry_id 4ILB _cell.length_a 180.984 _cell.length_b 132.412 _cell.length_c 159.884 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ILB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 N N N ? 8 O N N ? 8 X N N ? 8 Y N N ? 8 GA N N ? 8 HA N N ? 8 QA N N ? 8 RA N N ? 8 ZA N N ? 8 AB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PRO 72 A PRO 68 1_555 L NA NA . A NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.087 ? metalc ? metalc2 A O ILE 75 A ILE 71 1_555 L NA NA . A NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc3 A OE1 GLU 226 A GLU 222 1_555 M RB RB . A RB 408 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc4 M RB RB . A RB 408 1_555 B OE1 GLU 226 B GLU 222 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.535 ? metalc ? metalc5 M RB RB . A RB 408 1_555 C OE1 GLU 226 C GLU 222 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.596 ? metalc ? metalc6 M RB RB . A RB 408 1_555 D OE1 GLU 226 D GLU 222 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.554 ? metalc ? metalc7 M RB RB . A RB 408 1_555 E OE1 GLU 226 E GLU 222 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.633 ? metalc ? metalc8 B O PRO 72 B PRO 68 1_555 W NA NA . B NA 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.941 ? metalc ? metalc9 B O ILE 75 B ILE 71 1_555 W NA NA . B NA 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc10 C O PRO 72 C PRO 68 1_555 FA NA NA . C NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc11 C O ILE 75 C ILE 71 1_555 FA NA NA . C NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc12 D O ILE 75 D ILE 71 1_555 PA NA NA . D NA 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc13 E O PRO 72 E PRO 68 1_555 YA NA NA . E NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc14 E O ILE 75 E ILE 71 1_555 YA NA NA . E NA 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 4ILB _atom_sites.fract_transf_matrix[1][1] 0.005525 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001184 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006396 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 LMT A 1 401 5 LMT LMT . G 3 PLC A 1 402 1 PLC PLC . H 3 PLC A 1 403 3 PLC PLC . I 4 UNL A 1 404 5 UNL UNK . J 4 UNL A 1 405 6 UNL UNK . K 5 CL A 1 406 2 CL CL . L 6 NA A 1 407 5 NA NA . M 7 RB A 1 408 1 RB RB . N 8 ACT A 1 409 4 ACT ACT . O 8 ACT A 1 410 6 ACT ACT . P 2 LMT B 1 401 4 LMT LMT . Q 2 LMT B 1 402 6 LMT LMT . R 3 PLC B 1 403 4 PLC PLC . S 3 PLC B 1 404 6 PLC PLC . T 4 UNL B 1 405 1 UNL UNK . U 4 UNL B 1 406 7 UNL UNK . V 5 CL B 1 407 3 CL CL . W 6 NA B 1 408 1 NA NA . X 8 ACT B 1 409 3 ACT ACT . Y 8 ACT B 1 410 9 ACT ACT . Z 2 LMT C 1 401 1 LMT LMT . AA 3 PLC C 1 402 7 PLC PLC . BA 3 PLC C 1 403 9 PLC PLC . CA 4 UNL C 1 404 2 UNL UNK . DA 4 UNL C 1 405 8 UNL UNK . EA 5 CL C 1 406 4 CL CL . FA 6 NA C 1 407 2 NA NA . GA 8 ACT C 1 408 1 ACT ACT . HA 8 ACT C 1 409 2 ACT ACT . IA 2 LMT D 1 401 2 LMT LMT . JA 3 PLC D 1 402 10 PLC PLC . KA 3 PLC D 1 403 12 PLC PLC . LA 4 UNL D 1 404 3 UNL UNK . MA 4 UNL D 1 405 9 UNL UNK . NA 5 CL D 1 406 5 CL CL . OA 6 NA D 1 407 1 NA NA . PA 6 NA D 1 408 3 NA NA . QA 8 ACT D 1 409 7 ACT ACT . RA 8 ACT D 1 410 10 ACT ACT . SA 2 LMT E 1 401 3 LMT LMT . TA 3 PLC E 1 402 13 PLC PLC . UA 3 PLC E 1 403 15 PLC PLC . VA 4 UNL E 1 404 4 UNL UNK . WA 4 UNL E 1 405 10 UNL UNK . XA 5 CL E 1 406 1 CL CL . YA 6 NA E 1 407 4 NA NA . ZA 8 ACT E 1 408 5 ACT ACT . AB 8 ACT E 1 409 8 ACT ACT . BB 9 HOH A 1 501 4 HOH HOH . BB 9 HOH A 2 502 8 HOH HOH . BB 9 HOH A 3 503 9 HOH HOH . BB 9 HOH A 4 504 14 HOH HOH . BB 9 HOH A 5 505 20 HOH HOH . BB 9 HOH A 6 506 33 HOH HOH . BB 9 HOH A 7 507 38 HOH HOH . BB 9 HOH A 8 508 40 HOH HOH . BB 9 HOH A 9 509 51 HOH HOH . BB 9 HOH A 10 510 64 HOH HOH . BB 9 HOH A 11 511 80 HOH HOH . BB 9 HOH A 12 512 92 HOH HOH . BB 9 HOH A 13 513 102 HOH HOH . BB 9 HOH A 14 514 105 HOH HOH . CB 9 HOH B 1 501 6 HOH HOH . CB 9 HOH B 2 502 7 HOH HOH . CB 9 HOH B 3 503 18 HOH HOH . CB 9 HOH B 4 504 19 HOH HOH . CB 9 HOH B 5 505 22 HOH HOH . CB 9 HOH B 6 506 31 HOH HOH . CB 9 HOH B 7 507 39 HOH HOH . CB 9 HOH B 8 508 41 HOH HOH . CB 9 HOH B 9 509 48 HOH HOH . CB 9 HOH B 10 510 53 HOH HOH . CB 9 HOH B 11 511 65 HOH HOH . CB 9 HOH B 12 512 68 HOH HOH . CB 9 HOH B 13 513 76 HOH HOH . CB 9 HOH B 14 514 78 HOH HOH . CB 9 HOH B 15 515 82 HOH HOH . CB 9 HOH B 16 516 83 HOH HOH . CB 9 HOH B 17 517 88 HOH HOH . CB 9 HOH B 18 518 94 HOH HOH . CB 9 HOH B 19 519 103 HOH HOH . CB 9 HOH B 20 520 106 HOH HOH . DB 9 HOH C 1 501 5 HOH HOH . DB 9 HOH C 2 502 16 HOH HOH . DB 9 HOH C 3 503 24 HOH HOH . DB 9 HOH C 4 504 25 HOH HOH . DB 9 HOH C 5 505 28 HOH HOH . DB 9 HOH C 6 506 34 HOH HOH . DB 9 HOH C 7 507 45 HOH HOH . DB 9 HOH C 8 508 49 HOH HOH . DB 9 HOH C 9 509 59 HOH HOH . DB 9 HOH C 10 510 60 HOH HOH . DB 9 HOH C 11 511 63 HOH HOH . DB 9 HOH C 12 512 70 HOH HOH . DB 9 HOH C 13 513 90 HOH HOH . DB 9 HOH C 14 514 93 HOH HOH . DB 9 HOH C 15 515 99 HOH HOH . DB 9 HOH C 16 516 107 HOH HOH . EB 9 HOH D 1 501 1 HOH HOH . EB 9 HOH D 2 502 2 HOH HOH . EB 9 HOH D 3 503 11 HOH HOH . EB 9 HOH D 4 504 21 HOH HOH . EB 9 HOH D 5 505 23 HOH HOH . EB 9 HOH D 6 506 26 HOH HOH . EB 9 HOH D 7 507 27 HOH HOH . EB 9 HOH D 8 508 36 HOH HOH . EB 9 HOH D 9 509 37 HOH HOH . EB 9 HOH D 10 510 46 HOH HOH . EB 9 HOH D 11 511 55 HOH HOH . EB 9 HOH D 12 512 56 HOH HOH . EB 9 HOH D 13 513 95 HOH HOH . EB 9 HOH D 14 514 98 HOH HOH . EB 9 HOH D 15 515 100 HOH HOH . EB 9 HOH D 16 516 104 HOH HOH . FB 9 HOH E 1 501 10 HOH HOH . FB 9 HOH E 2 502 15 HOH HOH . FB 9 HOH E 3 503 29 HOH HOH . FB 9 HOH E 4 504 32 HOH HOH . FB 9 HOH E 5 505 35 HOH HOH . FB 9 HOH E 6 506 47 HOH HOH . FB 9 HOH E 7 507 58 HOH HOH . FB 9 HOH E 8 508 61 HOH HOH . FB 9 HOH E 9 509 62 HOH HOH . FB 9 HOH E 10 510 66 HOH HOH . FB 9 HOH E 11 511 72 HOH HOH . FB 9 HOH E 12 512 73 HOH HOH . FB 9 HOH E 13 513 75 HOH HOH . FB 9 HOH E 14 514 77 HOH HOH . FB 9 HOH E 15 515 89 HOH HOH . FB 9 HOH E 16 516 91 HOH HOH . FB 9 HOH E 17 517 96 HOH HOH . FB 9 HOH E 18 518 97 HOH HOH . FB 9 HOH E 19 519 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . AB 8 47.611 -16.198 -3.861 1 76.85 ? C ACT 409 E 1 HETATM 2 O O ACT . . . AB 8 46.411 -15.881 -4.001 1 82.11 ? O ACT 409 E 1 HETATM 3 O OXT ACT . . . AB 8 48.585 -15.412 -4.023 1 75.71 ? OXT ACT 409 E 1 HETATM 4 C CH3 ACT . . . AB 8 47.908 -17.667 -3.457 1 76.13 ? CH3 ACT 409 E 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 105 _model_server_stats.query_time_ms 1243 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #