data_4ILC # _model_server_result.job_id qObywpRPz0SmOqvRF1M47A _model_server_result.datetime_utc '2024-11-19 05:25:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ilc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"VA","auth_seq_id":401}' # _entry.id 4ILC # _exptl.entry_id 4ILC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.02 _cell.angle_gamma 90 _cell.entry_id 4ILC _cell.length_a 182.328 _cell.length_b 132.1 _cell.length_c 161.137 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ILC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 L N N ? 2 Q N N ? 2 W N N ? 2 AA N N ? 2 GA N N ? 2 LA N N ? 2 RA N N ? 2 VA N N ? 2 BB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 75 A ILE 71 1_555 O NA NA . A NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc2 B O PRO 72 B PRO 68 1_555 Y NA NA . B NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc3 B O ILE 75 B ILE 71 1_555 Y NA NA . B NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc4 C O PRO 72 C PRO 68 1_555 JA NA NA . C NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.196 ? metalc ? metalc5 C O ILE 75 C ILE 71 1_555 JA NA NA . C NA 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc6 D O ILE 75 D ILE 71 1_555 TA NA NA . D NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc7 E O PRO 72 E PRO 68 1_555 DB NA NA . E NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.131 ? metalc ? metalc8 E O ILE 75 E ILE 71 1_555 DB NA NA . E NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 4ILC _atom_sites.fract_transf_matrix[1][1] 0.005485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001268 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00637 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 ACT A 1 401 4 ACT ACT . G 3 PLC A 1 402 1 PLC PLC . H 3 PLC A 1 403 3 PLC PLC . I 4 UNL A 1 404 5 UNL UNK . J 4 UNL A 1 405 6 UNL UNK . K 5 CL A 1 406 3 CL CL . L 2 ACT A 1 407 1 ACT ACT . M 6 LMT A 1 408 4 LMT LMT . N 6 LMT A 1 409 5 LMT LMT . O 7 NA A 1 410 2 NA NA . P 8 SO4 A 1 411 2 SO4 SO4 . Q 2 ACT B 1 401 3 ACT ACT . R 3 PLC B 1 402 4 PLC PLC . S 3 PLC B 1 403 6 PLC PLC . T 4 UNL B 1 404 1 UNL UNK . U 4 UNL B 1 405 7 UNL UNK . V 5 CL B 1 406 4 CL CL . W 2 ACT B 1 407 4 ACT ACT . X 6 LMT B 1 408 6 LMT LMT . Y 7 NA B 1 409 3 NA NA . Z 8 SO4 B 1 410 1 SO4 SO4 . AA 2 ACT C 1 401 2 ACT ACT . BA 3 PLC C 1 402 7 PLC PLC . CA 3 PLC C 1 403 9 PLC PLC . DA 4 UNL C 1 404 2 UNL UNK . EA 4 UNL C 1 405 8 UNL UNK . FA 5 CL C 1 406 5 CL CL . GA 2 ACT C 1 407 5 ACT ACT . HA 6 LMT C 1 408 1 LMT LMT . IA 7 NA C 1 409 1 NA NA . JA 7 NA C 1 410 4 NA NA . KA 8 SO4 C 1 411 5 SO4 SO4 . LA 2 ACT D 1 401 1 ACT ACT . MA 3 PLC D 1 402 10 PLC PLC . NA 3 PLC D 1 403 12 PLC PLC . OA 4 UNL D 1 404 3 UNL UNK . PA 4 UNL D 1 405 9 UNL UNK . QA 5 CL D 1 406 1 CL CL . RA 2 ACT D 1 407 2 ACT ACT . SA 6 LMT D 1 408 2 LMT LMT . TA 7 NA D 1 409 5 NA NA . UA 8 SO4 D 1 410 4 SO4 SO4 . VA 2 ACT E 1 401 5 ACT ACT . WA 3 PLC E 1 402 13 PLC PLC . XA 3 PLC E 1 403 15 PLC PLC . YA 4 UNL E 1 404 4 UNL UNK . ZA 4 UNL E 1 405 10 UNL UNK . AB 5 CL E 1 406 2 CL CL . BB 2 ACT E 1 407 3 ACT ACT . CB 6 LMT E 1 408 3 LMT LMT . DB 7 NA E 1 409 6 NA NA . EB 8 SO4 E 1 410 3 SO4 SO4 . FB 9 HOH A 1 501 4 HOH HOH . FB 9 HOH A 2 502 40 HOH HOH . GB 9 HOH B 1 501 5 HOH HOH . GB 9 HOH B 2 502 8 HOH HOH . GB 9 HOH B 3 503 9 HOH HOH . GB 9 HOH B 4 504 10 HOH HOH . GB 9 HOH B 5 505 11 HOH HOH . GB 9 HOH B 6 506 17 HOH HOH . GB 9 HOH B 7 507 18 HOH HOH . GB 9 HOH B 8 508 21 HOH HOH . GB 9 HOH B 9 509 25 HOH HOH . GB 9 HOH B 10 510 30 HOH HOH . GB 9 HOH B 11 511 36 HOH HOH . HB 9 HOH C 1 501 1 HOH HOH . HB 9 HOH C 2 502 2 HOH HOH . HB 9 HOH C 3 503 6 HOH HOH . HB 9 HOH C 4 504 12 HOH HOH . HB 9 HOH C 5 505 16 HOH HOH . HB 9 HOH C 6 506 19 HOH HOH . HB 9 HOH C 7 507 37 HOH HOH . IB 9 HOH D 1 501 7 HOH HOH . IB 9 HOH D 2 502 13 HOH HOH . IB 9 HOH D 3 503 20 HOH HOH . IB 9 HOH D 4 504 23 HOH HOH . IB 9 HOH D 5 505 26 HOH HOH . IB 9 HOH D 6 506 27 HOH HOH . IB 9 HOH D 7 507 28 HOH HOH . IB 9 HOH D 8 508 29 HOH HOH . IB 9 HOH D 9 509 31 HOH HOH . IB 9 HOH D 10 510 32 HOH HOH . IB 9 HOH D 11 511 33 HOH HOH . IB 9 HOH D 12 512 34 HOH HOH . IB 9 HOH D 13 513 35 HOH HOH . IB 9 HOH D 14 514 38 HOH HOH . JB 9 HOH E 1 501 3 HOH HOH . JB 9 HOH E 2 502 14 HOH HOH . JB 9 HOH E 3 503 15 HOH HOH . JB 9 HOH E 4 504 22 HOH HOH . JB 9 HOH E 5 505 24 HOH HOH . JB 9 HOH E 6 506 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . VA 2 57.854 -22.349 -1.514 1 54.74 ? C ACT 401 E 1 HETATM 2 O O ACT . . . VA 2 56.809 -22.283 -0.836 1 64.91 ? O ACT 401 E 1 HETATM 3 O OXT ACT . . . VA 2 57.857 -22.171 -2.728 1 55.13 ? OXT ACT 401 E 1 HETATM 4 C CH3 ACT . . . VA 2 59.207 -22.621 -0.817 1 50.59 ? CH3 ACT 401 E 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #