data_4IMP # _model_server_result.job_id '_E--YyyBaIPrZQlwwt8AAg' _model_server_result.datetime_utc '2024-10-13 01:22:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4imp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1501}' # _entry.id 4IMP # _exptl.entry_id 4IMP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ketoreductase _entity.pdbx_ec 1.1.1.100 # _cell.angle_alpha 90 _cell.angle_beta 95.26 _cell.angle_gamma 90 _cell.entry_id 4IMP _cell.length_a 56.815 _cell.length_b 211.69 _cell.length_c 101.742 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IMP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 237 n n PA O2A NDP sing 238 n n PA O5B NDP sing 239 n n PA O3 NDP sing 240 n n O2A HOA2 NDP sing 241 n n O5B C5B NDP sing 242 n n C5B C4B NDP sing 243 n n C5B H51A NDP sing 244 n n C5B H52A NDP sing 245 n n C4B O4B NDP sing 246 n n C4B C3B NDP sing 247 n n C4B H4B NDP sing 248 n n O4B C1B NDP sing 249 n n C3B O3B NDP sing 250 n n C3B C2B NDP sing 251 n n C3B H3B NDP sing 252 n n O3B HO3A NDP sing 253 n n C2B O2B NDP sing 254 n n C2B C1B NDP sing 255 n n C2B H2B NDP sing 256 n n O2B P2B NDP sing 257 n n C1B N9A NDP sing 258 n n C1B H1B NDP sing 259 n n N9A C8A NDP sing 260 n y N9A C4A NDP sing 261 n y C8A N7A NDP doub 262 n y C8A H8A NDP sing 263 n n N7A C5A NDP sing 264 n y C5A C6A NDP sing 265 n y C5A C4A NDP doub 266 n y C6A N6A NDP sing 267 n n C6A N1A NDP doub 268 n y N6A H61A NDP sing 269 n n N6A H62A NDP sing 270 n n N1A C2A NDP sing 271 n y C2A N3A NDP doub 272 n y C2A H2A NDP sing 273 n n N3A C4A NDP sing 274 n y O3 PN NDP sing 275 n n PN O1N NDP doub 276 n n PN O2N NDP sing 277 n n PN O5D NDP sing 278 n n O2N H21N NDP sing 279 n n O5D C5D NDP sing 280 n n C5D C4D NDP sing 281 n n C5D H51N NDP sing 282 n n C5D H52N NDP sing 283 n n C4D O4D NDP sing 284 n n C4D C3D NDP sing 285 n n C4D H4D NDP sing 286 n n O4D C1D NDP sing 287 n n C3D O3D NDP sing 288 n n C3D C2D NDP sing 289 n n C3D H3D NDP sing 290 n n O3D HO3N NDP sing 291 n n C2D O2D NDP sing 292 n n C2D C1D NDP sing 293 n n C2D H2D NDP sing 294 n n O2D HO2N NDP sing 295 n n C1D N1N NDP sing 296 n n C1D H1D NDP sing 297 n n N1N C2N NDP sing 298 n n N1N C6N NDP sing 299 n n C2N C3N NDP doub 300 n n C2N H2N NDP sing 301 n n C3N C7N NDP sing 302 n n C3N C4N NDP sing 303 n n C7N O7N NDP doub 304 n n C7N N7N NDP sing 305 n n N7N H71N NDP sing 306 n n N7N H72N NDP sing 307 n n C4N C5N NDP sing 308 n n C4N H41N NDP sing 309 n n C4N H42N NDP sing 310 n n C5N C6N NDP doub 311 n n C5N H5N NDP sing 312 n n C6N H6N NDP sing 313 n n P2B O1X NDP doub 314 n n P2B O2X NDP sing 315 n n P2B O3X NDP sing 316 n n O2X HOP2 NDP sing 317 n n O3X HOP3 NDP sing 318 n n # _atom_sites.entry_id 4IMP _atom_sites.fract_transf_matrix[1][1] 0.017601 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00162 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00987 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NDP A 1 1501 1501 NDP NDP . F 2 NDP B 1 1501 1501 NDP NDP . G 2 NDP C 1 1501 1501 NDP NDP . H 2 NDP D 1 1501 1501 NDP NDP . I 3 HOH A 1 1601 1 HOH HOH . I 3 HOH A 2 1602 2 HOH HOH . I 3 HOH A 3 1603 3 HOH HOH . I 3 HOH A 4 1604 4 HOH HOH . I 3 HOH A 5 1605 5 HOH HOH . I 3 HOH A 6 1606 6 HOH HOH . I 3 HOH A 7 1607 7 HOH HOH . I 3 HOH A 8 1608 8 HOH HOH . I 3 HOH A 9 1609 10 HOH HOH . I 3 HOH A 10 1610 11 HOH HOH . I 3 HOH A 11 1611 12 HOH HOH . I 3 HOH A 12 1612 13 HOH HOH . I 3 HOH A 13 1613 15 HOH HOH . I 3 HOH A 14 1614 16 HOH HOH . I 3 HOH A 15 1615 17 HOH HOH . I 3 HOH A 16 1616 18 HOH HOH . I 3 HOH A 17 1617 19 HOH HOH . I 3 HOH A 18 1618 21 HOH HOH . I 3 HOH A 19 1619 26 HOH HOH . I 3 HOH A 20 1620 27 HOH HOH . I 3 HOH A 21 1621 30 HOH HOH . I 3 HOH A 22 1622 31 HOH HOH . I 3 HOH A 23 1623 33 HOH HOH . I 3 HOH A 24 1624 35 HOH HOH . I 3 HOH A 25 1625 36 HOH HOH . I 3 HOH A 26 1626 37 HOH HOH . J 3 HOH B 1 1601 9 HOH HOH . J 3 HOH B 2 1602 20 HOH HOH . J 3 HOH B 3 1603 22 HOH HOH . J 3 HOH B 4 1604 28 HOH HOH . J 3 HOH B 5 1605 29 HOH HOH . J 3 HOH B 6 1606 32 HOH HOH . J 3 HOH B 7 1607 34 HOH HOH . K 3 HOH C 1 1601 14 HOH HOH . L 3 HOH D 1 1601 23 HOH HOH . L 3 HOH D 2 1602 24 HOH HOH . L 3 HOH D 3 1603 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . F 2 -40.84 -66.315 61.882 1 51.91 ? PA NDP 1501 B 1 HETATM 2 O O1A NDP . . . F 2 -41.36 -65.177 61.17 1 59.06 ? O1A NDP 1501 B 1 HETATM 3 O O2A NDP . . . F 2 -41.137 -66.541 63.28 1 47.77 ? O2A NDP 1501 B 1 HETATM 4 O O5B NDP . . . F 2 -41.278 -67.558 61.091 1 65.44 ? O5B NDP 1501 B 1 HETATM 5 C C5B NDP . . . F 2 -41.218 -68.844 61.659 1 63.24 ? C5B NDP 1501 B 1 HETATM 6 C C4B NDP . . . F 2 -42.499 -69.559 61.299 1 69.93 ? C4B NDP 1501 B 1 HETATM 7 O O4B NDP . . . F 2 -42.412 -70.957 61.443 1 63.99 ? O4B NDP 1501 B 1 HETATM 8 C C3B NDP . . . F 2 -43.628 -69.128 62.18 1 60.4 ? C3B NDP 1501 B 1 HETATM 9 O O3B NDP . . . F 2 -44.429 -68.439 61.267 1 69.87 ? O3B NDP 1501 B 1 HETATM 10 C C2B NDP . . . F 2 -44.323 -70.382 62.633 1 57.97 ? C2B NDP 1501 B 1 HETATM 11 O O2B NDP . . . F 2 -45.708 -70.436 62.357 1 53.06 ? O2B NDP 1501 B 1 HETATM 12 C C1B NDP . . . F 2 -43.652 -71.468 61.843 1 56.5 ? C1B NDP 1501 B 1 HETATM 13 N N9A NDP . . . F 2 -43.579 -72.625 62.743 1 52.86 ? N9A NDP 1501 B 1 HETATM 14 C C8A NDP . . . F 2 -43.095 -72.659 63.974 1 49.99 ? C8A NDP 1501 B 1 HETATM 15 N N7A NDP . . . F 2 -43.246 -73.872 64.495 1 48.33 ? N7A NDP 1501 B 1 HETATM 16 C C5A NDP . . . F 2 -43.839 -74.632 63.588 1 49.27 ? C5A NDP 1501 B 1 HETATM 17 C C6A NDP . . . F 2 -44.303 -76.018 63.471 1 48.77 ? C6A NDP 1501 B 1 HETATM 18 N N6A NDP . . . F 2 -44.136 -76.882 64.47 1 49.65 ? N6A NDP 1501 B 1 HETATM 19 N N1A NDP . . . F 2 -44.878 -76.403 62.342 1 48.38 ? N1A NDP 1501 B 1 HETATM 20 C C2A NDP . . . F 2 -45.039 -75.569 61.327 1 49.66 ? C2A NDP 1501 B 1 HETATM 21 N N3A NDP . . . F 2 -44.651 -74.314 61.358 1 45.8 ? N3A NDP 1501 B 1 HETATM 22 C C4A NDP . . . F 2 -44.059 -73.8 62.438 1 50.68 ? C4A NDP 1501 B 1 HETATM 23 O O3 NDP . . . F 2 -39.3 -66.341 61.684 1 55.81 ? O3 NDP 1501 B 1 HETATM 24 P PN NDP . . . F 2 -38.586 -66.075 60.32 1 48.53 ? PN NDP 1501 B 1 HETATM 25 O O1N NDP . . . F 2 -37.701 -64.967 60.547 1 57.7 ? O1N NDP 1501 B 1 HETATM 26 O O2N NDP . . . F 2 -39.534 -66.061 59.228 1 54.17 ? O2N NDP 1501 B 1 HETATM 27 O O5D NDP . . . F 2 -37.568 -67.238 60.136 1 58.28 ? O5D NDP 1501 B 1 HETATM 28 C C5D NDP . . . F 2 -37.925 -68.559 59.814 1 54.07 ? C5D NDP 1501 B 1 HETATM 29 C C4D NDP . . . F 2 -36.704 -69.421 59.564 1 55.73 ? C4D NDP 1501 B 1 HETATM 30 O O4D NDP . . . F 2 -35.613 -68.679 59.061 1 53.31 ? O4D NDP 1501 B 1 HETATM 31 C C3D NDP . . . F 2 -36.271 -70.02 60.864 1 55.18 ? C3D NDP 1501 B 1 HETATM 32 O O3D NDP . . . F 2 -35.805 -71.323 60.624 1 58.56 ? O3D NDP 1501 B 1 HETATM 33 C C2D NDP . . . F 2 -35.048 -69.283 61.215 1 54.53 ? C2D NDP 1501 B 1 HETATM 34 O O2D NDP . . . F 2 -34.263 -70.192 61.956 1 50.1 ? O2D NDP 1501 B 1 HETATM 35 C C1D NDP . . . F 2 -34.491 -68.97 59.851 1 49.14 ? C1D NDP 1501 B 1 HETATM 36 N N1N NDP . . . F 2 -33.63 -67.819 59.931 1 49.76 ? N1N NDP 1501 B 1 HETATM 37 C C2N NDP . . . F 2 -34.116 -66.614 60.081 1 48.71 ? C2N NDP 1501 B 1 HETATM 38 C C3N NDP . . . F 2 -33.276 -65.528 60.165 1 55.95 ? C3N NDP 1501 B 1 HETATM 39 C C7N NDP . . . F 2 -33.801 -64.142 60.333 1 55 ? C7N NDP 1501 B 1 HETATM 40 O O7N NDP . . . F 2 -33.073 -63.247 60.045 1 48.5 ? O7N NDP 1501 B 1 HETATM 41 N N7N NDP . . . F 2 -35.011 -63.909 60.79 1 52.22 ? N7N NDP 1501 B 1 HETATM 42 C C4N NDP . . . F 2 -31.791 -65.677 60.1 1 51.47 ? C4N NDP 1501 B 1 HETATM 43 C C5N NDP . . . F 2 -31.413 -67.036 59.947 1 40.83 ? C5N NDP 1501 B 1 HETATM 44 C C6N NDP . . . F 2 -32.34 -68.025 59.871 1 45.61 ? C6N NDP 1501 B 1 HETATM 45 P P2B NDP . . . F 2 -46.713 -70.82 63.504 1 73.45 ? P2B NDP 1501 B 1 HETATM 46 O O1X NDP . . . F 2 -47.948 -70.268 62.989 1 61.15 ? O1X NDP 1501 B 1 HETATM 47 O O2X NDP . . . F 2 -46.74 -72.267 63.742 1 66.78 ? O2X NDP 1501 B 1 HETATM 48 O O3X NDP . . . F 2 -46.174 -70.105 64.646 1 73.43 ? O3X NDP 1501 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 48 #