data_4IN7
#
_model_server_result.job_id            eM1TDax3wA1l2bNpDpELLg 
_model_server_result.datetime_utc      '2024-11-05 23:53:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4in7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":302}' 
#
_entry.id    4IN7 
#
_exptl.entry_id    4IN7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4IN7 
_cell.length_a            139.138 
_cell.length_b            139.138 
_cell.length_c            185.14 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IN7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 T N N 
? 4 U N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O MET 140 H MET 134 1_555 I K K . H K 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? 
metalc ? metalc2 A O ALA 143 H ALA 137 1_555 I K K . H K 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? 
metalc ? metalc3 A O PHE 146 H PHE 140 1_555 I K K . H K 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? 
metalc ? metalc4 B NE2 HIS 191 L HIS 190 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc5 B NE2 HIS 231 L HIS 230 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc6 C OD1 ASN 215 M ASN 214 1_555 FA MG MG . M MG 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc7 C NE2 HIS 220 M HIS 219 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? 
metalc ? metalc8 C OE2 GLU 235 M GLU 234 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc9 C OE1 GLU 235 M GLU 234 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? 
metalc ? metalc10 C NE2 HIS 267 M HIS 266 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 840 n n 
C1 C2 GOL sing 841 n n 
C1 H11 GOL sing 842 n n 
C1 H12 GOL sing 843 n n 
O1 HO1 GOL sing 844 n n 
C2 O2 GOL sing 845 n n 
C2 C3 GOL sing 846 n n 
C2 H2 GOL sing 847 n n 
O2 HO2 GOL sing 848 n n 
C3 O3 GOL sing 849 n n 
C3 H31 GOL sing 850 n n 
C3 H32 GOL sing 851 n n 
O3 HO3 GOL sing 852 n n 
#
_atom_sites.entry_id                     4IN7 
_atom_sites.fract_transf_matrix[1][1]    0.007187 
_atom_sites.fract_transf_matrix[1][2]    0.004149 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008299 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005401 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 GOL H 1 301 301 GOL GOL . 
E 4 GOL H 1 306 301 GOL GOL . 
F 4 GOL H 1 302 302 GOL GOL . 
G 4 GOL H 1 303 303 GOL GOL . 
H 4 GOL H 1 304 304 GOL GOL . 
I 5 K H 1 305 305 K K . 
J 6 GGD H 1 307 410 GGD GGD . 
K 7 BCL L 1 301 302 BCL BCL . 
L 8 LDA L 1 302 303 LDA LDA . 
M 8 LDA L 1 303 304 LDA LDA . 
N 8 LDA L 1 304 305 LDA LDA . 
O 9 U10 L 1 305 306 U10 U10 . 
P 7 BCL L 1 306 307 BCL BCL . 
Q 10 PO4 L 1 307 308 PO4 PO4 . 
R 11 HTO L 1 308 309 HTO HTO . 
S 11 HTO L 1 309 310 HTO HTO . 
T 4 GOL L 1 310 311 GOL GOL . 
U 4 GOL L 1 311 312 GOL GOL . 
V 7 BCL M 1 401 313 BCL BCL . 
W 7 BCL M 1 402 401 BCL BCL . 
X 8 LDA M 1 403 402 LDA LDA . 
Y 8 LDA M 1 404 403 LDA LDA . 
Z 12 FE M 1 405 404 FE FE . 
AA 13 BPH M 1 406 405 BPH BPH . 
BA 9 U10 M 1 407 406 U10 U10 . 
CA 14 SPO M 1 408 407 SPO SPO . 
DA 15 CDL M 1 409 408 CDL CDL . 
EA 16 PC1 M 1 410 409 PC1 PC1 . 
FA 17 MG M 1 411 411 MG MG . 
GA 13 BPH M 1 412 412 BPH BPH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 19.617 94.49 14.625 1 85.61 ? C1 GOL 302 H 1 
HETATM 2 O O1 GOL . . . F 4 19.163 94.116 15.949 1 82.2 ? O1 GOL 302 H 1 
HETATM 3 C C2 GOL . . . F 4 20.102 95.949 14.513 1 85.34 ? C2 GOL 302 H 1 
HETATM 4 O O2 GOL . . . F 4 21.531 96.035 14.364 1 90.9 ? O2 GOL 302 H 1 
HETATM 5 C C3 GOL . . . F 4 19.512 96.665 13.305 1 82.35 ? C3 GOL 302 H 1 
HETATM 6 O O3 GOL . . . F 4 20.3 97.839 13.085 1 81.86 ? O3 GOL 302 H 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#