data_4IN7 # _model_server_result.job_id LwSSuE9iiYyLFDUdy2YmTQ _model_server_result.datetime_utc '2024-11-24 02:28:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4in7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":309}' # _entry.id 4IN7 # _exptl.entry_id 4IN7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 148.2 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEPTANE-1,2,3-TRIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4IN7 _cell.length_a 139.138 _cell.length_b 139.138 _cell.length_c 185.14 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IN7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 R N N ? 11 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O MET 140 H MET 134 1_555 I K K . H K 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc2 A O ALA 143 H ALA 137 1_555 I K K . H K 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc3 A O PHE 146 H PHE 140 1_555 I K K . H K 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc4 B NE2 HIS 191 L HIS 190 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc5 B NE2 HIS 231 L HIS 230 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc6 C OD1 ASN 215 M ASN 214 1_555 FA MG MG . M MG 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc7 C NE2 HIS 220 M HIS 219 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc8 C OE2 GLU 235 M GLU 234 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc9 C OE1 GLU 235 M GLU 234 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc10 C NE2 HIS 267 M HIS 266 1_555 Z FE FE . M FE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? # _chem_comp.formula 'C7 H16 O3' _chem_comp.formula_weight 148.2 _chem_comp.id HTO _chem_comp.mon_nstd_flag . _chem_comp.name HEPTANE-1,2,3-TRIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HTO sing 874 n n C1 C2 HTO sing 875 n n C1 H11 HTO sing 876 n n C1 H12 HTO sing 877 n n O1 HO1 HTO sing 878 n n C2 O2 HTO sing 879 n n C2 C3 HTO sing 880 n n C2 H2 HTO sing 881 n n O2 HO2 HTO sing 882 n n C3 O3 HTO sing 883 n n C3 C4 HTO sing 884 n n C3 H3 HTO sing 885 n n O3 HO3 HTO sing 886 n n C4 C5 HTO sing 887 n n C4 H41 HTO sing 888 n n C4 H42 HTO sing 889 n n C5 C6 HTO sing 890 n n C5 H51 HTO sing 891 n n C5 H52 HTO sing 892 n n C6 C7 HTO sing 893 n n C6 H61 HTO sing 894 n n C6 H62 HTO sing 895 n n C7 H71 HTO sing 896 n n C7 H72 HTO sing 897 n n C7 H73 HTO sing 898 n n # _atom_sites.entry_id 4IN7 _atom_sites.fract_transf_matrix[1][1] 0.007187 _atom_sites.fract_transf_matrix[1][2] 0.004149 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005401 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL H 1 301 301 GOL GOL . E 4 GOL H 1 306 301 GOL GOL . F 4 GOL H 1 302 302 GOL GOL . G 4 GOL H 1 303 303 GOL GOL . H 4 GOL H 1 304 304 GOL GOL . I 5 K H 1 305 305 K K . J 6 GGD H 1 307 410 GGD GGD . K 7 BCL L 1 301 302 BCL BCL . L 8 LDA L 1 302 303 LDA LDA . M 8 LDA L 1 303 304 LDA LDA . N 8 LDA L 1 304 305 LDA LDA . O 9 U10 L 1 305 306 U10 U10 . P 7 BCL L 1 306 307 BCL BCL . Q 10 PO4 L 1 307 308 PO4 PO4 . R 11 HTO L 1 308 309 HTO HTO . S 11 HTO L 1 309 310 HTO HTO . T 4 GOL L 1 310 311 GOL GOL . U 4 GOL L 1 311 312 GOL GOL . V 7 BCL M 1 401 313 BCL BCL . W 7 BCL M 1 402 401 BCL BCL . X 8 LDA M 1 403 402 LDA LDA . Y 8 LDA M 1 404 403 LDA LDA . Z 12 FE M 1 405 404 FE FE . AA 13 BPH M 1 406 405 BPH BPH . BA 9 U10 M 1 407 406 U10 U10 . CA 14 SPO M 1 408 407 SPO SPO . DA 15 CDL M 1 409 408 CDL CDL . EA 16 PC1 M 1 410 409 PC1 PC1 . FA 17 MG M 1 411 411 MG MG . GA 13 BPH M 1 412 412 BPH BPH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HTO . . . S 11 -9.818 87.458 27.714 1 104.1 ? C1 HTO 309 L 1 HETATM 2 O O1 HTO . . . S 11 -8.605 86.631 27.621 1 79.84 ? O1 HTO 309 L 1 HETATM 3 C C2 HTO . . . S 11 -10.724 87.348 28.996 1 102.49 ? C2 HTO 309 L 1 HETATM 4 O O2 HTO . . . S 11 -9.943 87.607 30.166 1 120.54 ? O2 HTO 309 L 1 HETATM 5 C C3 HTO . . . S 11 -12.032 88.227 29.08 1 104.49 ? C3 HTO 309 L 1 HETATM 6 O O3 HTO . . . S 11 -12.376 88.621 27.746 1 121.75 ? O3 HTO 309 L 1 HETATM 7 C C4 HTO . . . S 11 -12.086 89.501 30.001 1 96.28 ? C4 HTO 309 L 1 HETATM 8 C C5 HTO . . . S 11 -13.437 90.3 30.094 1 87.7 ? C5 HTO 309 L 1 HETATM 9 C C6 HTO . . . S 11 -13.483 91.697 29.401 1 79.91 ? C6 HTO 309 L 1 HETATM 10 C C7 HTO . . . S 11 -14.571 92.688 29.848 1 72.78 ? C7 HTO 309 L 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #