data_4IOK # _model_server_result.job_id YFIfIpwzLzXY1hTdkHH00g _model_server_result.datetime_utc '2024-10-15 16:26:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4iok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 4IOK # _exptl.entry_id 4IOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IOK _cell.length_a 91.17 _cell.length_b 212.976 _cell.length_c 53.444 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 75 A THR 75 1_555 F MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc2 A OE1 GLU 301 A GLU 301 1_555 F MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc3 D O1B ADP . A ADP 602 1_555 F MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.752 ? metalc ? metalc4 E O1 XPO . A XPO 603 1_555 F MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? metalc ? metalc5 F MG MG . A MG 604 1_555 N O HOH . A HOH 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc6 F MG MG . A MG 604 1_555 N O HOH . A HOH 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc7 B OG1 THR 75 B THR 75 1_555 L MG MG . B MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc8 B OE1 GLU 301 B GLU 301 1_555 L MG MG . B MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc9 J O1B ADP . B ADP 602 1_555 L MG MG . B MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc10 K O4 XPO . B XPO 603 1_555 L MG MG . B MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.785 ? metalc ? metalc11 L MG MG . B MG 604 1_555 O O HOH . B HOH 782 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc12 L MG MG . B MG 604 1_555 O O HOH . B HOH 783 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4IOK _atom_sites.fract_transf_matrix[1][1] 0.010969 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004695 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018711 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 601 601 SO4 SO4 . D 3 ADP A 1 602 700 ADP ADP . E 4 XPO A 1 603 701 XPO XPO . F 5 MG A 1 604 702 MG MG . G 6 TOE A 1 605 703 TOE TOE . H 6 TOE A 1 606 704 TOE TOE . I 2 SO4 B 1 601 601 SO4 SO4 . J 3 ADP B 1 602 700 ADP ADP . K 4 XPO B 1 603 701 XPO XPO . L 5 MG B 1 604 702 MG MG . M 6 TOE B 1 605 703 TOE TOE . N 7 HOH A 1 701 560 HOH HOH . N 7 HOH A 2 702 561 HOH HOH . N 7 HOH A 3 703 562 HOH HOH . N 7 HOH A 4 704 563 HOH HOH . N 7 HOH A 5 705 565 HOH HOH . N 7 HOH A 6 706 566 HOH HOH . N 7 HOH A 7 707 567 HOH HOH . N 7 HOH A 8 708 568 HOH HOH . N 7 HOH A 9 709 569 HOH HOH . N 7 HOH A 10 710 570 HOH HOH . N 7 HOH A 11 711 571 HOH HOH . N 7 HOH A 12 712 572 HOH HOH . N 7 HOH A 13 713 573 HOH HOH . N 7 HOH A 14 714 574 HOH HOH . N 7 HOH A 15 715 575 HOH HOH . N 7 HOH A 16 716 576 HOH HOH . N 7 HOH A 17 717 577 HOH HOH . N 7 HOH A 18 718 578 HOH HOH . N 7 HOH A 19 719 579 HOH HOH . N 7 HOH A 20 720 580 HOH HOH . N 7 HOH A 21 721 581 HOH HOH . N 7 HOH A 22 722 583 HOH HOH . N 7 HOH A 23 723 584 HOH HOH . N 7 HOH A 24 724 585 HOH HOH . N 7 HOH A 25 725 586 HOH HOH . N 7 HOH A 26 726 587 HOH HOH . N 7 HOH A 27 727 588 HOH HOH . N 7 HOH A 28 728 589 HOH HOH . N 7 HOH A 29 729 590 HOH HOH . N 7 HOH A 30 730 591 HOH HOH . N 7 HOH A 31 731 592 HOH HOH . N 7 HOH A 32 732 593 HOH HOH . N 7 HOH A 33 733 594 HOH HOH . N 7 HOH A 34 734 595 HOH HOH . N 7 HOH A 35 735 596 HOH HOH . N 7 HOH A 36 736 597 HOH HOH . N 7 HOH A 37 737 598 HOH HOH . N 7 HOH A 38 738 599 HOH HOH . N 7 HOH A 39 739 600 HOH HOH . N 7 HOH A 40 740 602 HOH HOH . N 7 HOH A 41 741 603 HOH HOH . N 7 HOH A 42 742 604 HOH HOH . N 7 HOH A 43 743 605 HOH HOH . N 7 HOH A 44 744 606 HOH HOH . N 7 HOH A 45 745 607 HOH HOH . N 7 HOH A 46 746 608 HOH HOH . N 7 HOH A 47 747 609 HOH HOH . N 7 HOH A 48 748 610 HOH HOH . N 7 HOH A 49 749 611 HOH HOH . N 7 HOH A 50 750 612 HOH HOH . N 7 HOH A 51 751 613 HOH HOH . N 7 HOH A 52 752 614 HOH HOH . N 7 HOH A 53 753 615 HOH HOH . N 7 HOH A 54 754 616 HOH HOH . N 7 HOH A 55 755 618 HOH HOH . N 7 HOH A 56 756 619 HOH HOH . N 7 HOH A 57 757 620 HOH HOH . N 7 HOH A 58 758 621 HOH HOH . N 7 HOH A 59 759 622 HOH HOH . N 7 HOH A 60 760 623 HOH HOH . N 7 HOH A 61 761 624 HOH HOH . N 7 HOH A 62 762 625 HOH HOH . N 7 HOH A 63 763 626 HOH HOH . N 7 HOH A 64 764 627 HOH HOH . N 7 HOH A 65 765 628 HOH HOH . N 7 HOH A 66 766 629 HOH HOH . N 7 HOH A 67 767 630 HOH HOH . N 7 HOH A 68 768 631 HOH HOH . N 7 HOH A 69 769 632 HOH HOH . N 7 HOH A 70 770 633 HOH HOH . N 7 HOH A 71 771 634 HOH HOH . N 7 HOH A 72 772 635 HOH HOH . N 7 HOH A 73 773 2 HOH HOH . N 7 HOH A 74 774 3 HOH HOH . N 7 HOH A 75 775 4 HOH HOH . N 7 HOH A 76 776 7 HOH HOH . N 7 HOH A 77 777 8 HOH HOH . N 7 HOH A 78 778 16 HOH HOH . N 7 HOH A 79 779 17 HOH HOH . N 7 HOH A 80 780 18 HOH HOH . N 7 HOH A 81 781 19 HOH HOH . N 7 HOH A 82 782 32 HOH HOH . N 7 HOH A 83 783 33 HOH HOH . N 7 HOH A 84 784 34 HOH HOH . N 7 HOH A 85 785 35 HOH HOH . N 7 HOH A 86 786 36 HOH HOH . N 7 HOH A 87 787 37 HOH HOH . N 7 HOH A 88 788 38 HOH HOH . N 7 HOH A 89 789 39 HOH HOH . N 7 HOH A 90 790 40 HOH HOH . N 7 HOH A 91 791 44 HOH HOH . N 7 HOH A 92 792 45 HOH HOH . N 7 HOH A 93 793 46 HOH HOH . N 7 HOH A 94 794 64 HOH HOH . N 7 HOH A 95 795 65 HOH HOH . N 7 HOH A 96 796 66 HOH HOH . N 7 HOH A 97 797 67 HOH HOH . N 7 HOH A 98 798 69 HOH HOH . N 7 HOH A 99 799 70 HOH HOH . N 7 HOH A 100 800 71 HOH HOH . N 7 HOH A 101 801 72 HOH HOH . N 7 HOH A 102 802 73 HOH HOH . N 7 HOH A 103 803 74 HOH HOH . N 7 HOH A 104 804 78 HOH HOH . N 7 HOH A 105 805 79 HOH HOH . N 7 HOH A 106 806 80 HOH HOH . N 7 HOH A 107 807 81 HOH HOH . N 7 HOH A 108 808 82 HOH HOH . N 7 HOH A 109 809 84 HOH HOH . N 7 HOH A 110 810 89 HOH HOH . N 7 HOH A 111 811 90 HOH HOH . N 7 HOH A 112 812 91 HOH HOH . N 7 HOH A 113 813 92 HOH HOH . N 7 HOH A 114 814 93 HOH HOH . N 7 HOH A 115 815 94 HOH HOH . N 7 HOH A 116 816 101 HOH HOH . N 7 HOH A 117 817 102 HOH HOH . N 7 HOH A 118 818 106 HOH HOH . N 7 HOH A 119 819 107 HOH HOH . N 7 HOH A 120 820 108 HOH HOH . N 7 HOH A 121 821 110 HOH HOH . N 7 HOH A 122 822 111 HOH HOH . N 7 HOH A 123 823 112 HOH HOH . N 7 HOH A 124 824 113 HOH HOH . N 7 HOH A 125 825 114 HOH HOH . N 7 HOH A 126 826 115 HOH HOH . N 7 HOH A 127 827 116 HOH HOH . N 7 HOH A 128 828 117 HOH HOH . N 7 HOH A 129 829 118 HOH HOH . N 7 HOH A 130 830 119 HOH HOH . O 7 HOH B 1 701 564 HOH HOH . O 7 HOH B 2 702 582 HOH HOH . O 7 HOH B 3 703 617 HOH HOH . O 7 HOH B 4 704 636 HOH HOH . O 7 HOH B 5 705 560 HOH HOH . O 7 HOH B 6 706 561 HOH HOH . O 7 HOH B 7 707 563 HOH HOH . O 7 HOH B 8 708 564 HOH HOH . O 7 HOH B 9 709 565 HOH HOH . O 7 HOH B 10 710 566 HOH HOH . O 7 HOH B 11 711 567 HOH HOH . O 7 HOH B 12 712 568 HOH HOH . O 7 HOH B 13 713 569 HOH HOH . O 7 HOH B 14 714 570 HOH HOH . O 7 HOH B 15 715 571 HOH HOH . O 7 HOH B 16 716 572 HOH HOH . O 7 HOH B 17 717 573 HOH HOH . O 7 HOH B 18 718 574 HOH HOH . O 7 HOH B 19 719 575 HOH HOH . O 7 HOH B 20 720 576 HOH HOH . O 7 HOH B 21 721 577 HOH HOH . O 7 HOH B 22 722 578 HOH HOH . O 7 HOH B 23 723 579 HOH HOH . O 7 HOH B 24 724 580 HOH HOH . O 7 HOH B 25 725 581 HOH HOH . O 7 HOH B 26 726 582 HOH HOH . O 7 HOH B 27 727 583 HOH HOH . O 7 HOH B 28 728 584 HOH HOH . O 7 HOH B 29 729 585 HOH HOH . O 7 HOH B 30 730 586 HOH HOH . O 7 HOH B 31 731 587 HOH HOH . O 7 HOH B 32 732 588 HOH HOH . O 7 HOH B 33 733 589 HOH HOH . O 7 HOH B 34 734 590 HOH HOH . O 7 HOH B 35 735 591 HOH HOH . O 7 HOH B 36 736 592 HOH HOH . O 7 HOH B 37 737 593 HOH HOH . O 7 HOH B 38 738 594 HOH HOH . O 7 HOH B 39 739 595 HOH HOH . O 7 HOH B 40 740 596 HOH HOH . O 7 HOH B 41 741 597 HOH HOH . O 7 HOH B 42 742 598 HOH HOH . O 7 HOH B 43 743 599 HOH HOH . O 7 HOH B 44 744 600 HOH HOH . O 7 HOH B 45 745 603 HOH HOH . O 7 HOH B 46 746 604 HOH HOH . O 7 HOH B 47 747 606 HOH HOH . O 7 HOH B 48 748 607 HOH HOH . O 7 HOH B 49 749 608 HOH HOH . O 7 HOH B 50 750 610 HOH HOH . O 7 HOH B 51 751 611 HOH HOH . O 7 HOH B 52 752 612 HOH HOH . O 7 HOH B 53 753 613 HOH HOH . O 7 HOH B 54 754 615 HOH HOH . O 7 HOH B 55 755 617 HOH HOH . O 7 HOH B 56 756 618 HOH HOH . O 7 HOH B 57 757 619 HOH HOH . O 7 HOH B 58 758 620 HOH HOH . O 7 HOH B 59 759 621 HOH HOH . O 7 HOH B 60 760 622 HOH HOH . O 7 HOH B 61 761 623 HOH HOH . O 7 HOH B 62 762 624 HOH HOH . O 7 HOH B 63 763 625 HOH HOH . O 7 HOH B 64 764 626 HOH HOH . O 7 HOH B 65 765 627 HOH HOH . O 7 HOH B 66 766 628 HOH HOH . O 7 HOH B 67 767 629 HOH HOH . O 7 HOH B 68 768 630 HOH HOH . O 7 HOH B 69 769 631 HOH HOH . O 7 HOH B 70 770 1 HOH HOH . O 7 HOH B 71 771 5 HOH HOH . O 7 HOH B 72 772 6 HOH HOH . O 7 HOH B 73 773 9 HOH HOH . O 7 HOH B 74 774 10 HOH HOH . O 7 HOH B 75 775 11 HOH HOH . O 7 HOH B 76 776 12 HOH HOH . O 7 HOH B 77 777 13 HOH HOH . O 7 HOH B 78 778 14 HOH HOH . O 7 HOH B 79 779 15 HOH HOH . O 7 HOH B 80 780 20 HOH HOH . O 7 HOH B 81 781 21 HOH HOH . O 7 HOH B 82 782 22 HOH HOH . O 7 HOH B 83 783 23 HOH HOH . O 7 HOH B 84 784 24 HOH HOH . O 7 HOH B 85 785 25 HOH HOH . O 7 HOH B 86 786 26 HOH HOH . O 7 HOH B 87 787 27 HOH HOH . O 7 HOH B 88 788 28 HOH HOH . O 7 HOH B 89 789 29 HOH HOH . O 7 HOH B 90 790 30 HOH HOH . O 7 HOH B 91 791 31 HOH HOH . O 7 HOH B 92 792 41 HOH HOH . O 7 HOH B 93 793 42 HOH HOH . O 7 HOH B 94 794 43 HOH HOH . O 7 HOH B 95 795 47 HOH HOH . O 7 HOH B 96 796 48 HOH HOH . O 7 HOH B 97 797 49 HOH HOH . O 7 HOH B 98 798 50 HOH HOH . O 7 HOH B 99 799 51 HOH HOH . O 7 HOH B 100 800 52 HOH HOH . O 7 HOH B 101 801 53 HOH HOH . O 7 HOH B 102 802 54 HOH HOH . O 7 HOH B 103 803 55 HOH HOH . O 7 HOH B 104 804 56 HOH HOH . O 7 HOH B 105 805 57 HOH HOH . O 7 HOH B 106 806 58 HOH HOH . O 7 HOH B 107 807 59 HOH HOH . O 7 HOH B 108 808 60 HOH HOH . O 7 HOH B 109 809 61 HOH HOH . O 7 HOH B 110 810 62 HOH HOH . O 7 HOH B 111 811 63 HOH HOH . O 7 HOH B 112 812 68 HOH HOH . O 7 HOH B 113 813 75 HOH HOH . O 7 HOH B 114 814 76 HOH HOH . O 7 HOH B 115 815 77 HOH HOH . O 7 HOH B 116 816 83 HOH HOH . O 7 HOH B 117 817 85 HOH HOH . O 7 HOH B 118 818 86 HOH HOH . O 7 HOH B 119 819 87 HOH HOH . O 7 HOH B 120 820 88 HOH HOH . O 7 HOH B 121 821 95 HOH HOH . O 7 HOH B 122 822 96 HOH HOH . O 7 HOH B 123 823 97 HOH HOH . O 7 HOH B 124 824 98 HOH HOH . O 7 HOH B 125 825 99 HOH HOH . O 7 HOH B 126 826 100 HOH HOH . O 7 HOH B 127 827 827 HOH HOH . O 7 HOH B 128 828 104 HOH HOH . O 7 HOH B 129 829 105 HOH HOH . O 7 HOH B 130 830 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x 21.763 _atom_site.Cartn_y 29.819 _atom_site.Cartn_z 76.045 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 604 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #