data_4IOO # _model_server_result.job_id eBZsZPTYPyqiaL6pdnK9FQ _model_server_result.datetime_utc '2024-11-24 21:54:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ioo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 4IOO # _exptl.entry_id 4IOO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IOO _cell.length_a 37.199 _cell.length_b 44.128 _cell.length_c 77.963 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IOO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 112 n n C1 C2 EDO sing 113 n n C1 H11 EDO sing 114 n n C1 H12 EDO sing 115 n n O1 HO1 EDO sing 116 n n C2 O2 EDO sing 117 n n C2 H21 EDO sing 118 n n C2 H22 EDO sing 119 n n O2 HO2 EDO sing 120 n n # _atom_sites.entry_id 4IOO _atom_sites.fract_transf_matrix[1][1] 0.026882 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 301 EDO EDO . C 2 EDO A 1 302 302 EDO EDO . D 2 EDO A 1 303 303 EDO EDO . E 2 EDO A 1 304 304 EDO EDO . F 2 EDO A 1 305 305 EDO EDO . G 3 BAE A 1 306 1 BAE BAE . H 4 DMS A 1 307 1 DMS DMS . I 5 HOH A 1 401 1 HOH HOH . I 5 HOH A 2 402 2 HOH HOH . I 5 HOH A 3 403 3 HOH HOH . I 5 HOH A 4 404 4 HOH HOH . I 5 HOH A 5 405 5 HOH HOH . I 5 HOH A 6 406 6 HOH HOH . I 5 HOH A 7 407 7 HOH HOH . I 5 HOH A 8 408 8 HOH HOH . I 5 HOH A 9 409 9 HOH HOH . I 5 HOH A 10 410 10 HOH HOH . I 5 HOH A 11 411 11 HOH HOH . I 5 HOH A 12 412 12 HOH HOH . I 5 HOH A 13 413 13 HOH HOH . I 5 HOH A 14 414 14 HOH HOH . I 5 HOH A 15 415 15 HOH HOH . I 5 HOH A 16 416 16 HOH HOH . I 5 HOH A 17 417 17 HOH HOH . I 5 HOH A 18 418 18 HOH HOH . I 5 HOH A 19 419 19 HOH HOH . I 5 HOH A 20 420 20 HOH HOH . I 5 HOH A 21 421 21 HOH HOH . I 5 HOH A 22 422 22 HOH HOH . I 5 HOH A 23 423 23 HOH HOH . I 5 HOH A 24 424 24 HOH HOH . I 5 HOH A 25 425 25 HOH HOH . I 5 HOH A 26 426 26 HOH HOH . I 5 HOH A 27 427 27 HOH HOH . I 5 HOH A 28 428 28 HOH HOH . I 5 HOH A 29 429 29 HOH HOH . I 5 HOH A 30 430 30 HOH HOH . I 5 HOH A 31 431 31 HOH HOH . I 5 HOH A 32 432 32 HOH HOH . I 5 HOH A 33 433 33 HOH HOH . I 5 HOH A 34 434 34 HOH HOH . I 5 HOH A 35 435 35 HOH HOH . I 5 HOH A 36 436 36 HOH HOH . I 5 HOH A 37 437 37 HOH HOH . I 5 HOH A 38 438 38 HOH HOH . I 5 HOH A 39 439 39 HOH HOH . I 5 HOH A 40 440 40 HOH HOH . I 5 HOH A 41 441 41 HOH HOH . I 5 HOH A 42 442 42 HOH HOH . I 5 HOH A 43 443 43 HOH HOH . I 5 HOH A 44 444 44 HOH HOH . I 5 HOH A 45 445 45 HOH HOH . I 5 HOH A 46 446 46 HOH HOH . I 5 HOH A 47 447 47 HOH HOH . I 5 HOH A 48 448 48 HOH HOH . I 5 HOH A 49 449 49 HOH HOH . I 5 HOH A 50 450 50 HOH HOH . I 5 HOH A 51 451 51 HOH HOH . I 5 HOH A 52 452 52 HOH HOH . I 5 HOH A 53 453 53 HOH HOH . I 5 HOH A 54 454 54 HOH HOH . I 5 HOH A 55 455 55 HOH HOH . I 5 HOH A 56 456 56 HOH HOH . I 5 HOH A 57 457 57 HOH HOH . I 5 HOH A 58 458 58 HOH HOH . I 5 HOH A 59 459 59 HOH HOH . I 5 HOH A 60 460 60 HOH HOH . I 5 HOH A 61 461 61 HOH HOH . I 5 HOH A 62 462 62 HOH HOH . I 5 HOH A 63 463 63 HOH HOH . I 5 HOH A 64 464 64 HOH HOH . I 5 HOH A 65 465 65 HOH HOH . I 5 HOH A 66 466 66 HOH HOH . I 5 HOH A 67 467 67 HOH HOH . I 5 HOH A 68 468 68 HOH HOH . I 5 HOH A 69 469 69 HOH HOH . I 5 HOH A 70 470 70 HOH HOH . I 5 HOH A 71 471 71 HOH HOH . I 5 HOH A 72 472 72 HOH HOH . I 5 HOH A 73 473 73 HOH HOH . I 5 HOH A 74 474 74 HOH HOH . I 5 HOH A 75 475 75 HOH HOH . I 5 HOH A 76 476 76 HOH HOH . I 5 HOH A 77 477 77 HOH HOH . I 5 HOH A 78 478 78 HOH HOH . I 5 HOH A 79 479 79 HOH HOH . I 5 HOH A 80 480 80 HOH HOH . I 5 HOH A 81 481 81 HOH HOH . I 5 HOH A 82 482 82 HOH HOH . I 5 HOH A 83 483 83 HOH HOH . I 5 HOH A 84 484 84 HOH HOH . I 5 HOH A 85 485 85 HOH HOH . I 5 HOH A 86 486 86 HOH HOH . I 5 HOH A 87 487 87 HOH HOH . I 5 HOH A 88 488 88 HOH HOH . I 5 HOH A 89 489 89 HOH HOH . I 5 HOH A 90 490 90 HOH HOH . I 5 HOH A 91 491 91 HOH HOH . I 5 HOH A 92 492 92 HOH HOH . I 5 HOH A 93 493 93 HOH HOH . I 5 HOH A 94 494 94 HOH HOH . I 5 HOH A 95 495 96 HOH HOH . I 5 HOH A 96 496 97 HOH HOH . I 5 HOH A 97 497 98 HOH HOH . I 5 HOH A 98 498 99 HOH HOH . I 5 HOH A 99 499 100 HOH HOH . I 5 HOH A 100 500 101 HOH HOH . I 5 HOH A 101 501 102 HOH HOH . I 5 HOH A 102 502 103 HOH HOH . I 5 HOH A 103 503 104 HOH HOH . I 5 HOH A 104 504 105 HOH HOH . I 5 HOH A 105 505 107 HOH HOH . I 5 HOH A 106 506 108 HOH HOH . I 5 HOH A 107 507 109 HOH HOH . I 5 HOH A 108 508 111 HOH HOH . I 5 HOH A 109 509 112 HOH HOH . I 5 HOH A 110 510 113 HOH HOH . I 5 HOH A 111 511 116 HOH HOH . I 5 HOH A 112 512 117 HOH HOH . I 5 HOH A 113 513 118 HOH HOH . I 5 HOH A 114 514 119 HOH HOH . I 5 HOH A 115 515 121 HOH HOH . I 5 HOH A 116 516 122 HOH HOH . I 5 HOH A 117 517 124 HOH HOH . I 5 HOH A 118 518 125 HOH HOH . I 5 HOH A 119 519 126 HOH HOH . I 5 HOH A 120 520 129 HOH HOH . I 5 HOH A 121 521 130 HOH HOH . I 5 HOH A 122 522 131 HOH HOH . I 5 HOH A 123 523 132 HOH HOH . I 5 HOH A 124 524 133 HOH HOH . I 5 HOH A 125 525 134 HOH HOH . I 5 HOH A 126 526 135 HOH HOH . I 5 HOH A 127 527 138 HOH HOH . I 5 HOH A 128 528 139 HOH HOH . I 5 HOH A 129 529 140 HOH HOH . I 5 HOH A 130 530 141 HOH HOH . I 5 HOH A 131 531 142 HOH HOH . I 5 HOH A 132 532 143 HOH HOH . I 5 HOH A 133 533 144 HOH HOH . I 5 HOH A 134 534 145 HOH HOH . I 5 HOH A 135 535 146 HOH HOH . I 5 HOH A 136 536 147 HOH HOH . I 5 HOH A 137 537 148 HOH HOH . I 5 HOH A 138 538 150 HOH HOH . I 5 HOH A 139 539 151 HOH HOH . I 5 HOH A 140 540 152 HOH HOH . I 5 HOH A 141 541 153 HOH HOH . I 5 HOH A 142 542 154 HOH HOH . I 5 HOH A 143 543 157 HOH HOH . I 5 HOH A 144 544 158 HOH HOH . I 5 HOH A 145 545 159 HOH HOH . I 5 HOH A 146 546 160 HOH HOH . I 5 HOH A 147 547 161 HOH HOH . I 5 HOH A 148 548 162 HOH HOH . I 5 HOH A 149 549 165 HOH HOH . I 5 HOH A 150 550 166 HOH HOH . I 5 HOH A 151 551 170 HOH HOH . I 5 HOH A 152 552 171 HOH HOH . I 5 HOH A 153 553 172 HOH HOH . I 5 HOH A 154 554 174 HOH HOH . I 5 HOH A 155 555 177 HOH HOH . I 5 HOH A 156 556 179 HOH HOH . I 5 HOH A 157 557 180 HOH HOH . I 5 HOH A 158 558 182 HOH HOH . I 5 HOH A 159 559 183 HOH HOH . I 5 HOH A 160 560 187 HOH HOH . I 5 HOH A 161 561 188 HOH HOH . I 5 HOH A 162 562 191 HOH HOH . I 5 HOH A 163 563 192 HOH HOH . I 5 HOH A 164 564 193 HOH HOH . I 5 HOH A 165 565 194 HOH HOH . I 5 HOH A 166 566 229 HOH HOH . I 5 HOH A 167 567 230 HOH HOH . I 5 HOH A 168 568 231 HOH HOH . I 5 HOH A 169 569 232 HOH HOH . I 5 HOH A 170 570 233 HOH HOH . I 5 HOH A 171 571 235 HOH HOH . I 5 HOH A 172 572 236 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . A . F 2 8.458 4.487 3.851 0.5 13.13 ? C1 EDO 305 A 1 HETATM 2 C C1 EDO . B . F 2 8.4 4.779 4.285 0.5 14.06 ? C1 EDO 305 A 1 HETATM 3 O O1 EDO . A . F 2 9.352 5.477 3.321 0.5 17.15 ? O1 EDO 305 A 1 HETATM 4 O O1 EDO . B . F 2 9.275 5.447 3.37 0.5 19.15 ? O1 EDO 305 A 1 HETATM 5 C C2 EDO . A . F 2 8.594 4.415 5.361 0.5 13.76 ? C2 EDO 305 A 1 HETATM 6 C C2 EDO . B . F 2 9.214 4.25 5.449 0.5 12.37 ? C2 EDO 305 A 1 HETATM 7 O O2 EDO . A . F 2 7.514 5.138 5.945 0.5 18.87 ? O2 EDO 305 A 1 HETATM 8 O O2 EDO . B . F 2 9.61 5.393 6.204 0.5 10.02 ? O2 EDO 305 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 8 #