data_4IR5 # _model_server_result.job_id 5dDW3ilO9RZCqtUenjj9xw _model_server_result.datetime_utc '2024-11-22 22:29:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ir5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2003}' # _entry.id 4IR5 # _exptl.entry_id 4IR5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IR5 _cell.length_a 82.09 _cell.length_b 96.52 _cell.length_c 57.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IR5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4IR5 _atom_sites.fract_transf_matrix[1][1] 0.012182 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 2001 2 EDO EDO . C 2 EDO A 1 2002 3 EDO EDO . D 2 EDO A 1 2003 4 EDO EDO . E 2 EDO A 1 2004 6 EDO EDO . F 2 EDO A 1 2005 7 EDO EDO . G 2 EDO A 1 2006 8 EDO EDO . H 2 EDO A 1 2007 9 EDO EDO . I 2 EDO A 1 2008 10 EDO EDO . J 2 EDO A 1 2009 11 EDO EDO . K 2 EDO A 1 2010 12 EDO EDO . L 2 EDO A 1 2011 13 EDO EDO . M 2 EDO A 1 2012 14 EDO EDO . N 3 IR5 A 1 2013 1 IR5 IR5 . O 4 HOH A 1 2101 1 HOH HOH . O 4 HOH A 2 2102 2 HOH HOH . O 4 HOH A 3 2103 3 HOH HOH . O 4 HOH A 4 2104 4 HOH HOH . O 4 HOH A 5 2105 5 HOH HOH . O 4 HOH A 6 2106 6 HOH HOH . O 4 HOH A 7 2107 7 HOH HOH . O 4 HOH A 8 2108 8 HOH HOH . O 4 HOH A 9 2109 9 HOH HOH . O 4 HOH A 10 2110 10 HOH HOH . O 4 HOH A 11 2111 11 HOH HOH . O 4 HOH A 12 2112 13 HOH HOH . O 4 HOH A 13 2113 14 HOH HOH . O 4 HOH A 14 2114 15 HOH HOH . O 4 HOH A 15 2115 16 HOH HOH . O 4 HOH A 16 2116 17 HOH HOH . O 4 HOH A 17 2117 18 HOH HOH . O 4 HOH A 18 2118 19 HOH HOH . O 4 HOH A 19 2119 20 HOH HOH . O 4 HOH A 20 2120 21 HOH HOH . O 4 HOH A 21 2121 22 HOH HOH . O 4 HOH A 22 2122 23 HOH HOH . O 4 HOH A 23 2123 24 HOH HOH . O 4 HOH A 24 2124 25 HOH HOH . O 4 HOH A 25 2125 26 HOH HOH . O 4 HOH A 26 2126 27 HOH HOH . O 4 HOH A 27 2127 28 HOH HOH . O 4 HOH A 28 2128 29 HOH HOH . O 4 HOH A 29 2129 30 HOH HOH . O 4 HOH A 30 2130 31 HOH HOH . O 4 HOH A 31 2131 32 HOH HOH . O 4 HOH A 32 2132 33 HOH HOH . O 4 HOH A 33 2133 34 HOH HOH . O 4 HOH A 34 2134 36 HOH HOH . O 4 HOH A 35 2135 37 HOH HOH . O 4 HOH A 36 2136 38 HOH HOH . O 4 HOH A 37 2137 39 HOH HOH . O 4 HOH A 38 2138 40 HOH HOH . O 4 HOH A 39 2139 41 HOH HOH . O 4 HOH A 40 2140 42 HOH HOH . O 4 HOH A 41 2141 43 HOH HOH . O 4 HOH A 42 2142 44 HOH HOH . O 4 HOH A 43 2143 45 HOH HOH . O 4 HOH A 44 2144 46 HOH HOH . O 4 HOH A 45 2145 47 HOH HOH . O 4 HOH A 46 2146 48 HOH HOH . O 4 HOH A 47 2147 49 HOH HOH . O 4 HOH A 48 2148 50 HOH HOH . O 4 HOH A 49 2149 51 HOH HOH . O 4 HOH A 50 2150 52 HOH HOH . O 4 HOH A 51 2151 53 HOH HOH . O 4 HOH A 52 2152 54 HOH HOH . O 4 HOH A 53 2153 55 HOH HOH . O 4 HOH A 54 2154 57 HOH HOH . O 4 HOH A 55 2155 58 HOH HOH . O 4 HOH A 56 2156 59 HOH HOH . O 4 HOH A 57 2157 60 HOH HOH . O 4 HOH A 58 2158 61 HOH HOH . O 4 HOH A 59 2159 62 HOH HOH . O 4 HOH A 60 2160 63 HOH HOH . O 4 HOH A 61 2161 64 HOH HOH . O 4 HOH A 62 2162 65 HOH HOH . O 4 HOH A 63 2163 66 HOH HOH . O 4 HOH A 64 2164 67 HOH HOH . O 4 HOH A 65 2165 68 HOH HOH . O 4 HOH A 66 2166 69 HOH HOH . O 4 HOH A 67 2167 70 HOH HOH . O 4 HOH A 68 2168 71 HOH HOH . O 4 HOH A 69 2169 72 HOH HOH . O 4 HOH A 70 2170 73 HOH HOH . O 4 HOH A 71 2171 74 HOH HOH . O 4 HOH A 72 2172 75 HOH HOH . O 4 HOH A 73 2173 76 HOH HOH . O 4 HOH A 74 2174 77 HOH HOH . O 4 HOH A 75 2175 78 HOH HOH . O 4 HOH A 76 2176 80 HOH HOH . O 4 HOH A 77 2177 81 HOH HOH . O 4 HOH A 78 2178 82 HOH HOH . O 4 HOH A 79 2179 83 HOH HOH . O 4 HOH A 80 2180 84 HOH HOH . O 4 HOH A 81 2181 85 HOH HOH . O 4 HOH A 82 2182 86 HOH HOH . O 4 HOH A 83 2183 88 HOH HOH . O 4 HOH A 84 2184 89 HOH HOH . O 4 HOH A 85 2185 90 HOH HOH . O 4 HOH A 86 2186 91 HOH HOH . O 4 HOH A 87 2187 92 HOH HOH . O 4 HOH A 88 2188 93 HOH HOH . O 4 HOH A 89 2189 94 HOH HOH . O 4 HOH A 90 2190 95 HOH HOH . O 4 HOH A 91 2191 96 HOH HOH . O 4 HOH A 92 2192 97 HOH HOH . O 4 HOH A 93 2193 98 HOH HOH . O 4 HOH A 94 2194 99 HOH HOH . O 4 HOH A 95 2195 100 HOH HOH . O 4 HOH A 96 2196 101 HOH HOH . O 4 HOH A 97 2197 102 HOH HOH . O 4 HOH A 98 2198 103 HOH HOH . O 4 HOH A 99 2199 105 HOH HOH . O 4 HOH A 100 2200 106 HOH HOH . O 4 HOH A 101 2201 107 HOH HOH . O 4 HOH A 102 2202 108 HOH HOH . O 4 HOH A 103 2203 109 HOH HOH . O 4 HOH A 104 2204 110 HOH HOH . O 4 HOH A 105 2205 111 HOH HOH . O 4 HOH A 106 2206 113 HOH HOH . O 4 HOH A 107 2207 114 HOH HOH . O 4 HOH A 108 2208 115 HOH HOH . O 4 HOH A 109 2209 116 HOH HOH . O 4 HOH A 110 2210 117 HOH HOH . O 4 HOH A 111 2211 118 HOH HOH . O 4 HOH A 112 2212 119 HOH HOH . O 4 HOH A 113 2213 120 HOH HOH . O 4 HOH A 114 2214 121 HOH HOH . O 4 HOH A 115 2215 124 HOH HOH . O 4 HOH A 116 2216 125 HOH HOH . O 4 HOH A 117 2217 127 HOH HOH . O 4 HOH A 118 2218 128 HOH HOH . O 4 HOH A 119 2219 129 HOH HOH . O 4 HOH A 120 2220 130 HOH HOH . O 4 HOH A 121 2221 131 HOH HOH . O 4 HOH A 122 2222 132 HOH HOH . O 4 HOH A 123 2223 133 HOH HOH . O 4 HOH A 124 2224 134 HOH HOH . O 4 HOH A 125 2225 136 HOH HOH . O 4 HOH A 126 2226 137 HOH HOH . O 4 HOH A 127 2227 138 HOH HOH . O 4 HOH A 128 2228 140 HOH HOH . O 4 HOH A 129 2229 143 HOH HOH . O 4 HOH A 130 2230 144 HOH HOH . O 4 HOH A 131 2231 145 HOH HOH . O 4 HOH A 132 2232 146 HOH HOH . O 4 HOH A 133 2233 147 HOH HOH . O 4 HOH A 134 2234 148 HOH HOH . O 4 HOH A 135 2235 149 HOH HOH . O 4 HOH A 136 2236 150 HOH HOH . O 4 HOH A 137 2237 151 HOH HOH . O 4 HOH A 138 2238 152 HOH HOH . O 4 HOH A 139 2239 153 HOH HOH . O 4 HOH A 140 2240 155 HOH HOH . O 4 HOH A 141 2241 157 HOH HOH . O 4 HOH A 142 2242 158 HOH HOH . O 4 HOH A 143 2243 159 HOH HOH . O 4 HOH A 144 2244 160 HOH HOH . O 4 HOH A 145 2245 161 HOH HOH . O 4 HOH A 146 2246 162 HOH HOH . O 4 HOH A 147 2247 163 HOH HOH . O 4 HOH A 148 2248 164 HOH HOH . O 4 HOH A 149 2249 165 HOH HOH . O 4 HOH A 150 2250 166 HOH HOH . O 4 HOH A 151 2251 167 HOH HOH . O 4 HOH A 152 2252 168 HOH HOH . O 4 HOH A 153 2253 169 HOH HOH . O 4 HOH A 154 2254 170 HOH HOH . O 4 HOH A 155 2255 171 HOH HOH . O 4 HOH A 156 2256 173 HOH HOH . O 4 HOH A 157 2257 174 HOH HOH . O 4 HOH A 158 2258 175 HOH HOH . O 4 HOH A 159 2259 176 HOH HOH . O 4 HOH A 160 2260 177 HOH HOH . O 4 HOH A 161 2261 178 HOH HOH . O 4 HOH A 162 2262 179 HOH HOH . O 4 HOH A 163 2263 180 HOH HOH . O 4 HOH A 164 2264 181 HOH HOH . O 4 HOH A 165 2265 182 HOH HOH . O 4 HOH A 166 2266 183 HOH HOH . O 4 HOH A 167 2267 184 HOH HOH . O 4 HOH A 168 2268 185 HOH HOH . O 4 HOH A 169 2269 186 HOH HOH . O 4 HOH A 170 2270 187 HOH HOH . O 4 HOH A 171 2271 188 HOH HOH . O 4 HOH A 172 2272 189 HOH HOH . O 4 HOH A 173 2273 190 HOH HOH . O 4 HOH A 174 2274 191 HOH HOH . O 4 HOH A 175 2275 192 HOH HOH . O 4 HOH A 176 2276 193 HOH HOH . O 4 HOH A 177 2277 194 HOH HOH . O 4 HOH A 178 2278 195 HOH HOH . O 4 HOH A 179 2279 196 HOH HOH . O 4 HOH A 180 2280 197 HOH HOH . O 4 HOH A 181 2281 198 HOH HOH . O 4 HOH A 182 2282 199 HOH HOH . O 4 HOH A 183 2283 200 HOH HOH . O 4 HOH A 184 2284 201 HOH HOH . O 4 HOH A 185 2285 202 HOH HOH . O 4 HOH A 186 2286 203 HOH HOH . O 4 HOH A 187 2287 204 HOH HOH . O 4 HOH A 188 2288 205 HOH HOH . O 4 HOH A 189 2289 206 HOH HOH . O 4 HOH A 190 2290 207 HOH HOH . O 4 HOH A 191 2291 209 HOH HOH . O 4 HOH A 192 2292 210 HOH HOH . O 4 HOH A 193 2293 211 HOH HOH . O 4 HOH A 194 2294 212 HOH HOH . O 4 HOH A 195 2295 213 HOH HOH . O 4 HOH A 196 2296 214 HOH HOH . O 4 HOH A 197 2297 215 HOH HOH . O 4 HOH A 198 2298 216 HOH HOH . O 4 HOH A 199 2299 217 HOH HOH . O 4 HOH A 200 2300 220 HOH HOH . O 4 HOH A 201 2301 221 HOH HOH . O 4 HOH A 202 2302 222 HOH HOH . O 4 HOH A 203 2303 223 HOH HOH . O 4 HOH A 204 2304 224 HOH HOH . O 4 HOH A 205 2305 225 HOH HOH . O 4 HOH A 206 2306 226 HOH HOH . O 4 HOH A 207 2307 227 HOH HOH . O 4 HOH A 208 2308 228 HOH HOH . O 4 HOH A 209 2309 229 HOH HOH . O 4 HOH A 210 2310 230 HOH HOH . O 4 HOH A 211 2311 231 HOH HOH . O 4 HOH A 212 2312 232 HOH HOH . O 4 HOH A 213 2313 233 HOH HOH . O 4 HOH A 214 2314 234 HOH HOH . O 4 HOH A 215 2315 237 HOH HOH . O 4 HOH A 216 2316 238 HOH HOH . O 4 HOH A 217 2317 239 HOH HOH . O 4 HOH A 218 2318 240 HOH HOH . O 4 HOH A 219 2319 241 HOH HOH . O 4 HOH A 220 2320 242 HOH HOH . O 4 HOH A 221 2321 243 HOH HOH . O 4 HOH A 222 2322 244 HOH HOH . O 4 HOH A 223 2323 245 HOH HOH . O 4 HOH A 224 2324 246 HOH HOH . O 4 HOH A 225 2325 247 HOH HOH . O 4 HOH A 226 2326 248 HOH HOH . O 4 HOH A 227 2327 249 HOH HOH . O 4 HOH A 228 2328 250 HOH HOH . O 4 HOH A 229 2329 251 HOH HOH . O 4 HOH A 230 2330 252 HOH HOH . O 4 HOH A 231 2331 253 HOH HOH . O 4 HOH A 232 2332 254 HOH HOH . O 4 HOH A 233 2333 255 HOH HOH . O 4 HOH A 234 2334 256 HOH HOH . O 4 HOH A 235 2335 257 HOH HOH . O 4 HOH A 236 2336 258 HOH HOH . O 4 HOH A 237 2337 259 HOH HOH . O 4 HOH A 238 2338 260 HOH HOH . O 4 HOH A 239 2339 261 HOH HOH . O 4 HOH A 240 2340 262 HOH HOH . O 4 HOH A 241 2341 263 HOH HOH . O 4 HOH A 242 2342 264 HOH HOH . O 4 HOH A 243 2343 265 HOH HOH . O 4 HOH A 244 2344 266 HOH HOH . O 4 HOH A 245 2345 267 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 12.861 8.552 3.105 1 46.2 ? C1 EDO 2003 A 1 HETATM 2 O O1 EDO . . . D 2 14.069 8.075 3.697 1 46.48 ? O1 EDO 2003 A 1 HETATM 3 C C2 EDO . . . D 2 12.169 9.548 4.021 1 71.99 ? C2 EDO 2003 A 1 HETATM 4 O O2 EDO . . . D 2 13.13 10.161 4.896 1 62.79 ? O2 EDO 2003 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #