data_4IS9 # _model_server_result.job_id Ujyc8j-2Yz89SV6pgyDAcg _model_server_result.datetime_utc '2024-11-30 07:38:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4is9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":403}' # _entry.id 4IS9 # _exptl.entry_id 4IS9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4IS9 _cell.length_a 117.44 _cell.length_b 117.44 _cell.length_c 253.661 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IS9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 79 A HIS 79 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc2 A NE2 HIS 238 A HIS 238 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc3 A OD1 ASP 242 A ASP 242 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc4 A OD2 ASP 242 A ASP 242 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc5 D ZN ZN . A ZN 502 1_555 E OAS LTF . A LTF 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc6 D ZN ZN . A ZN 502 1_555 E O LTF . A LTF 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc7 B NE2 HIS 79 B HIS 79 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc8 B NE2 HIS 238 B HIS 238 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc9 B OD1 ASP 242 B ASP 242 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc10 F ZN ZN . B ZN 401 1_555 G OAS LTF . B LTF 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc11 F ZN ZN . B ZN 401 1_555 G O LTF . B LTF 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4IS9 _atom_sites.fract_transf_matrix[1][1] 0.008515 _atom_sites.fract_transf_matrix[1][2] 0.004916 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009832 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003942 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IPA A 1 501 501 IPA IPA . D 3 ZN A 1 502 301 ZN ZN . E 4 LTF A 1 503 401 LTF LTF . F 3 ZN B 1 401 301 ZN ZN . G 4 LTF B 1 402 401 LTF LTF . H 5 NA B 1 403 500 NA NA . I 2 IPA B 1 404 502 IPA IPA . J 6 HOH A 1 601 1 HOH HOH . J 6 HOH A 2 602 2 HOH HOH . J 6 HOH A 3 603 4 HOH HOH . J 6 HOH A 4 604 5 HOH HOH . J 6 HOH A 5 605 6 HOH HOH . J 6 HOH A 6 606 7 HOH HOH . J 6 HOH A 7 607 8 HOH HOH . J 6 HOH A 8 608 9 HOH HOH . J 6 HOH A 9 609 10 HOH HOH . J 6 HOH A 10 610 12 HOH HOH . J 6 HOH A 11 611 13 HOH HOH . J 6 HOH A 12 612 15 HOH HOH . J 6 HOH A 13 613 19 HOH HOH . J 6 HOH A 14 614 20 HOH HOH . J 6 HOH A 15 615 21 HOH HOH . J 6 HOH A 16 616 22 HOH HOH . J 6 HOH A 17 617 24 HOH HOH . J 6 HOH A 18 618 26 HOH HOH . J 6 HOH A 19 619 27 HOH HOH . J 6 HOH A 20 620 31 HOH HOH . J 6 HOH A 21 621 32 HOH HOH . J 6 HOH A 22 622 33 HOH HOH . J 6 HOH A 23 623 34 HOH HOH . J 6 HOH A 24 624 36 HOH HOH . J 6 HOH A 25 625 37 HOH HOH . J 6 HOH A 26 626 38 HOH HOH . J 6 HOH A 27 627 39 HOH HOH . J 6 HOH A 28 628 40 HOH HOH . J 6 HOH A 29 629 42 HOH HOH . J 6 HOH A 30 630 44 HOH HOH . J 6 HOH A 31 631 46 HOH HOH . J 6 HOH A 32 632 47 HOH HOH . J 6 HOH A 33 633 50 HOH HOH . J 6 HOH A 34 634 51 HOH HOH . J 6 HOH A 35 635 52 HOH HOH . J 6 HOH A 36 636 53 HOH HOH . J 6 HOH A 37 637 54 HOH HOH . J 6 HOH A 38 638 55 HOH HOH . J 6 HOH A 39 639 56 HOH HOH . J 6 HOH A 40 640 57 HOH HOH . J 6 HOH A 41 641 58 HOH HOH . J 6 HOH A 42 642 59 HOH HOH . J 6 HOH A 43 643 60 HOH HOH . J 6 HOH A 44 644 61 HOH HOH . J 6 HOH A 45 645 62 HOH HOH . J 6 HOH A 46 646 63 HOH HOH . J 6 HOH A 47 647 64 HOH HOH . J 6 HOH A 48 648 65 HOH HOH . J 6 HOH A 49 649 66 HOH HOH . J 6 HOH A 50 650 67 HOH HOH . J 6 HOH A 51 651 68 HOH HOH . J 6 HOH A 52 652 69 HOH HOH . J 6 HOH A 53 653 70 HOH HOH . J 6 HOH A 54 654 71 HOH HOH . J 6 HOH A 55 655 72 HOH HOH . J 6 HOH A 56 656 74 HOH HOH . J 6 HOH A 57 657 75 HOH HOH . J 6 HOH A 58 658 76 HOH HOH . J 6 HOH A 59 659 77 HOH HOH . J 6 HOH A 60 660 79 HOH HOH . J 6 HOH A 61 661 80 HOH HOH . J 6 HOH A 62 662 82 HOH HOH . J 6 HOH A 63 663 83 HOH HOH . J 6 HOH A 64 664 85 HOH HOH . J 6 HOH A 65 665 86 HOH HOH . J 6 HOH A 66 666 88 HOH HOH . J 6 HOH A 67 667 89 HOH HOH . J 6 HOH A 68 668 90 HOH HOH . J 6 HOH A 69 669 92 HOH HOH . J 6 HOH A 70 670 93 HOH HOH . J 6 HOH A 71 671 95 HOH HOH . J 6 HOH A 72 672 99 HOH HOH . J 6 HOH A 73 673 100 HOH HOH . J 6 HOH A 74 674 101 HOH HOH . J 6 HOH A 75 675 102 HOH HOH . J 6 HOH A 76 676 104 HOH HOH . J 6 HOH A 77 677 105 HOH HOH . J 6 HOH A 78 678 106 HOH HOH . J 6 HOH A 79 679 107 HOH HOH . J 6 HOH A 80 680 109 HOH HOH . J 6 HOH A 81 681 111 HOH HOH . J 6 HOH A 82 682 112 HOH HOH . J 6 HOH A 83 683 113 HOH HOH . J 6 HOH A 84 684 114 HOH HOH . J 6 HOH A 85 685 115 HOH HOH . J 6 HOH A 86 686 116 HOH HOH . J 6 HOH A 87 687 117 HOH HOH . J 6 HOH A 88 688 118 HOH HOH . J 6 HOH A 89 689 119 HOH HOH . J 6 HOH A 90 690 120 HOH HOH . J 6 HOH A 91 691 122 HOH HOH . J 6 HOH A 92 692 123 HOH HOH . J 6 HOH A 93 693 126 HOH HOH . J 6 HOH A 94 694 128 HOH HOH . J 6 HOH A 95 695 129 HOH HOH . J 6 HOH A 96 696 130 HOH HOH . J 6 HOH A 97 697 131 HOH HOH . J 6 HOH A 98 698 132 HOH HOH . J 6 HOH A 99 699 133 HOH HOH . J 6 HOH A 100 700 134 HOH HOH . J 6 HOH A 101 701 135 HOH HOH . J 6 HOH A 102 702 136 HOH HOH . J 6 HOH A 103 703 137 HOH HOH . J 6 HOH A 104 704 138 HOH HOH . J 6 HOH A 105 705 140 HOH HOH . J 6 HOH A 106 706 141 HOH HOH . J 6 HOH A 107 707 144 HOH HOH . J 6 HOH A 108 708 145 HOH HOH . J 6 HOH A 109 709 146 HOH HOH . J 6 HOH A 110 710 147 HOH HOH . J 6 HOH A 111 711 149 HOH HOH . J 6 HOH A 112 712 150 HOH HOH . J 6 HOH A 113 713 151 HOH HOH . J 6 HOH A 114 714 152 HOH HOH . J 6 HOH A 115 715 154 HOH HOH . J 6 HOH A 116 716 155 HOH HOH . J 6 HOH A 117 717 158 HOH HOH . J 6 HOH A 118 718 159 HOH HOH . J 6 HOH A 119 719 160 HOH HOH . J 6 HOH A 120 720 161 HOH HOH . J 6 HOH A 121 721 162 HOH HOH . J 6 HOH A 122 722 163 HOH HOH . J 6 HOH A 123 723 165 HOH HOH . J 6 HOH A 124 724 167 HOH HOH . J 6 HOH A 125 725 169 HOH HOH . J 6 HOH A 126 726 170 HOH HOH . J 6 HOH A 127 727 171 HOH HOH . J 6 HOH A 128 728 172 HOH HOH . J 6 HOH A 129 729 176 HOH HOH . J 6 HOH A 130 730 177 HOH HOH . J 6 HOH A 131 731 179 HOH HOH . J 6 HOH A 132 732 180 HOH HOH . J 6 HOH A 133 733 182 HOH HOH . J 6 HOH A 134 734 183 HOH HOH . J 6 HOH A 135 735 187 HOH HOH . J 6 HOH A 136 736 189 HOH HOH . J 6 HOH A 137 737 190 HOH HOH . J 6 HOH A 138 738 191 HOH HOH . J 6 HOH A 139 739 194 HOH HOH . J 6 HOH A 140 740 195 HOH HOH . J 6 HOH A 141 741 196 HOH HOH . J 6 HOH A 142 742 202 HOH HOH . J 6 HOH A 143 743 204 HOH HOH . J 6 HOH A 144 744 205 HOH HOH . J 6 HOH A 145 745 207 HOH HOH . J 6 HOH A 146 746 208 HOH HOH . J 6 HOH A 147 747 210 HOH HOH . J 6 HOH A 148 748 211 HOH HOH . J 6 HOH A 149 749 212 HOH HOH . J 6 HOH A 150 750 216 HOH HOH . J 6 HOH A 151 751 217 HOH HOH . J 6 HOH A 152 752 220 HOH HOH . J 6 HOH A 153 753 221 HOH HOH . J 6 HOH A 154 754 222 HOH HOH . J 6 HOH A 155 755 223 HOH HOH . J 6 HOH A 156 756 224 HOH HOH . J 6 HOH A 157 757 225 HOH HOH . J 6 HOH A 158 758 226 HOH HOH . J 6 HOH A 159 759 227 HOH HOH . J 6 HOH A 160 760 228 HOH HOH . J 6 HOH A 161 761 229 HOH HOH . J 6 HOH A 162 762 230 HOH HOH . J 6 HOH A 163 763 231 HOH HOH . J 6 HOH A 164 764 232 HOH HOH . J 6 HOH A 165 765 233 HOH HOH . J 6 HOH A 166 766 234 HOH HOH . J 6 HOH A 167 767 235 HOH HOH . J 6 HOH A 168 768 236 HOH HOH . J 6 HOH A 169 769 237 HOH HOH . J 6 HOH A 170 770 238 HOH HOH . J 6 HOH A 171 771 239 HOH HOH . J 6 HOH A 172 772 241 HOH HOH . J 6 HOH A 173 773 245 HOH HOH . J 6 HOH A 174 774 247 HOH HOH . J 6 HOH A 175 775 248 HOH HOH . J 6 HOH A 176 776 249 HOH HOH . J 6 HOH A 177 777 250 HOH HOH . J 6 HOH A 178 778 251 HOH HOH . J 6 HOH A 179 779 252 HOH HOH . J 6 HOH A 180 780 253 HOH HOH . J 6 HOH A 181 781 254 HOH HOH . J 6 HOH A 182 782 255 HOH HOH . J 6 HOH A 183 783 256 HOH HOH . J 6 HOH A 184 784 257 HOH HOH . J 6 HOH A 185 785 258 HOH HOH . J 6 HOH A 186 786 259 HOH HOH . J 6 HOH A 187 787 260 HOH HOH . J 6 HOH A 188 788 261 HOH HOH . J 6 HOH A 189 789 262 HOH HOH . J 6 HOH A 190 790 265 HOH HOH . J 6 HOH A 191 791 266 HOH HOH . J 6 HOH A 192 792 269 HOH HOH . J 6 HOH A 193 793 270 HOH HOH . J 6 HOH A 194 794 271 HOH HOH . J 6 HOH A 195 795 272 HOH HOH . J 6 HOH A 196 796 273 HOH HOH . J 6 HOH A 197 797 276 HOH HOH . J 6 HOH A 198 798 197 HOH HOH . K 6 HOH B 1 501 3 HOH HOH . K 6 HOH B 2 502 11 HOH HOH . K 6 HOH B 3 503 14 HOH HOH . K 6 HOH B 4 504 16 HOH HOH . K 6 HOH B 5 505 17 HOH HOH . K 6 HOH B 6 506 18 HOH HOH . K 6 HOH B 7 507 23 HOH HOH . K 6 HOH B 8 508 25 HOH HOH . K 6 HOH B 9 509 28 HOH HOH . K 6 HOH B 10 510 29 HOH HOH . K 6 HOH B 11 511 30 HOH HOH . K 6 HOH B 12 512 35 HOH HOH . K 6 HOH B 13 513 41 HOH HOH . K 6 HOH B 14 514 43 HOH HOH . K 6 HOH B 15 515 45 HOH HOH . K 6 HOH B 16 516 48 HOH HOH . K 6 HOH B 17 517 49 HOH HOH . K 6 HOH B 18 518 73 HOH HOH . K 6 HOH B 19 519 78 HOH HOH . K 6 HOH B 20 520 81 HOH HOH . K 6 HOH B 21 521 84 HOH HOH . K 6 HOH B 22 522 87 HOH HOH . K 6 HOH B 23 523 91 HOH HOH . K 6 HOH B 24 524 94 HOH HOH . K 6 HOH B 25 525 96 HOH HOH . K 6 HOH B 26 526 97 HOH HOH . K 6 HOH B 27 527 98 HOH HOH . K 6 HOH B 28 528 103 HOH HOH . K 6 HOH B 29 529 108 HOH HOH . K 6 HOH B 30 530 110 HOH HOH . K 6 HOH B 31 531 121 HOH HOH . K 6 HOH B 32 532 124 HOH HOH . K 6 HOH B 33 533 125 HOH HOH . K 6 HOH B 34 534 127 HOH HOH . K 6 HOH B 35 535 139 HOH HOH . K 6 HOH B 36 536 142 HOH HOH . K 6 HOH B 37 537 143 HOH HOH . K 6 HOH B 38 538 148 HOH HOH . K 6 HOH B 39 539 153 HOH HOH . K 6 HOH B 40 540 156 HOH HOH . K 6 HOH B 41 541 157 HOH HOH . K 6 HOH B 42 542 164 HOH HOH . K 6 HOH B 43 543 166 HOH HOH . K 6 HOH B 44 544 168 HOH HOH . K 6 HOH B 45 545 173 HOH HOH . K 6 HOH B 46 546 174 HOH HOH . K 6 HOH B 47 547 175 HOH HOH . K 6 HOH B 48 548 178 HOH HOH . K 6 HOH B 49 549 181 HOH HOH . K 6 HOH B 50 550 184 HOH HOH . K 6 HOH B 51 551 185 HOH HOH . K 6 HOH B 52 552 186 HOH HOH . K 6 HOH B 53 553 188 HOH HOH . K 6 HOH B 54 554 192 HOH HOH . K 6 HOH B 55 555 193 HOH HOH . K 6 HOH B 56 556 198 HOH HOH . K 6 HOH B 57 557 199 HOH HOH . K 6 HOH B 58 558 200 HOH HOH . K 6 HOH B 59 559 201 HOH HOH . K 6 HOH B 60 560 203 HOH HOH . K 6 HOH B 61 561 206 HOH HOH . K 6 HOH B 62 562 209 HOH HOH . K 6 HOH B 63 563 213 HOH HOH . K 6 HOH B 64 564 214 HOH HOH . K 6 HOH B 65 565 215 HOH HOH . K 6 HOH B 66 566 218 HOH HOH . K 6 HOH B 67 567 219 HOH HOH . K 6 HOH B 68 568 240 HOH HOH . K 6 HOH B 69 569 242 HOH HOH . K 6 HOH B 70 570 243 HOH HOH . K 6 HOH B 71 571 244 HOH HOH . K 6 HOH B 72 572 246 HOH HOH . K 6 HOH B 73 573 263 HOH HOH . K 6 HOH B 74 574 264 HOH HOH . K 6 HOH B 75 575 267 HOH HOH . K 6 HOH B 76 576 268 HOH HOH . K 6 HOH B 77 577 274 HOH HOH . K 6 HOH B 78 578 275 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x 85.52 _atom_site.Cartn_y 13.885 _atom_site.Cartn_z 29.431 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.41 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 403 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #